Click here to switch to the map view.

The map label for this gene is gatY [H]

Identifier: 16767064

GI number: 16767064

Start: 3979830

End: 3980690

Strand: Reverse

Name: gatY [H]

Synonym: STM3780

Alternate gene names: 16767064

Gene position: 3980690-3979830 (Counterclockwise)

Preceding gene: 16767065

Following gene: 16767063

Centisome position: 81.95

GC content: 43.32

Gene sequence:

>861_bases
ATGCCTTTAGTCAATGGTAGGATCCTGCTCAATTGTATTCAGGAAAAACATGTCCTTGCGGGGGCATTTAATACAACGAA
CCTGGAGACAACAATTTCCATTCTTAATGCAATAGAACGTTCCGGATTGCCCAATTTTATTCAAATTGCTCCTACTAATG
CACAGCTTTCAGGTTACGATTACATTTATGAAATAGTTAAGCGACATGCCGATAAAATGGATATTCCTGTCAGCCTGCAT
CTGGATCATGGGAAAACTCTGGAAGATGTTAAGCAGGCTGTCCGGGCCGGATTTACCTCAGTAATGATTGATGGCGCGGC
GCTACCGCTCGAAGAAAATATTGCATTTACCCGAGAAGCTGTCGATTTCTGTAAATCATTTGGTGTTCCCGTCGAAGCGG
AATTAGGCGCTATTCTGGGTAAGGAAGATGATCATGTCAGCGAGGCTGACTGCAAAACTGAACCTGAGAAGGTTCAGCGC
TTTGTTGAGGAGACAGGGTGCGACATGCTGGCAGTGTCAATTGGTAATGTACATGGTCTTGAAGATATCCCACGCATTGA
TATCCCGCTATTACAACGCATCGCGTCTGTCAGTCCGGTACCTTTGGTTATTCATGGAGGTTCTGGTATTGACGCGGATA
TTCTTCGCAGCTTTGTTAATTACAAAGTAGCCAAAGTGAATATTGCGAGTGATTTGCGCAAAGCCTTTATTACTACTGTT
GGTAAGGCTTGGGTAAATAATAACAACGAGGCTAATCTGGCGCGTGTCATGGCGAACGCAAAACAGGCAGTTGAGGATGA
TGTTTATTCTAAAATTAAGATGATGAATAAAAATCACTCAGCATTCCGCAAAGTCTCTTAA

Upstream 100 bases:

>100_bases
TTAAACTGCGGCAAGAAGGGGCGCTTATTGGTGAATAACTGTGATAACTCAATAGTTCGATAATTTACTTACACTGCTCA
CATAAATATCTGGAGTTAAT

Downstream 100 bases:

>100_bases
GGAAAATATATGATTAGACAAAAAGTACGCGTTATGAACAGTACGGGGCTTCATGCGCGGCCAGCCGCTACGCTTGCGAA
AATTGTCAAAAAATACCAGT

Product: fructose-1,6-bisphosphate aldolase

Products: NA

Alternate protein names: TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase [H]

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MPLVNGRILLNCIQEKHVLAGAFNTTNLETTISILNAIERSGLPNFIQIAPTNAQLSGYDYIYEIVKRHADKMDIPVSLH
LDHGKTLEDVKQAVRAGFTSVMIDGAALPLEENIAFTREAVDFCKSFGVPVEAELGAILGKEDDHVSEADCKTEPEKVQR
FVEETGCDMLAVSIGNVHGLEDIPRIDIPLLQRIASVSPVPLVIHGGSGIDADILRSFVNYKVAKVNIASDLRKAFITTV
GKAWVNNNNEANLARVMANAKQAVEDDVYSKIKMMNKNHSAFRKVS

Sequences:

>Translated_286_residues
MPLVNGRILLNCIQEKHVLAGAFNTTNLETTISILNAIERSGLPNFIQIAPTNAQLSGYDYIYEIVKRHADKMDIPVSLH
LDHGKTLEDVKQAVRAGFTSVMIDGAALPLEENIAFTREAVDFCKSFGVPVEAELGAILGKEDDHVSEADCKTEPEKVQR
FVEETGCDMLAVSIGNVHGLEDIPRIDIPLLQRIASVSPVPLVIHGGSGIDADILRSFVNYKVAKVNIASDLRKAFITTV
GKAWVNNNNEANLARVMANAKQAVEDDVYSKIKMMNKNHSAFRKVS
>Mature_285_residues
PLVNGRILLNCIQEKHVLAGAFNTTNLETTISILNAIERSGLPNFIQIAPTNAQLSGYDYIYEIVKRHADKMDIPVSLHL
DHGKTLEDVKQAVRAGFTSVMIDGAALPLEENIAFTREAVDFCKSFGVPVEAELGAILGKEDDHVSEADCKTEPEKVQRF
VEETGCDMLAVSIGNVHGLEDIPRIDIPLLQRIASVSPVPLVIHGGSGIDADILRSFVNYKVAKVNIASDLRKAFITTVG
KAWVNNNNEANLARVMANAKQAVEDDVYSKIKMMNKNHSAFRKVS

Specific function: Catalytic subunit of the tagatose-1,6-bisphosphate aldolase KbaYZ, which catalyzes the reversible aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to produce tagatose 1,6- bisphosphate (T

COG id: COG0191

COG function: function code G; Fructose/tagatose bisphosphate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class II fructose-bisphosphate aldolase family. TagBP aldolase KbaY subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789526, Length=278, Percent_Identity=36.6906474820144, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI87082041, Length=275, Percent_Identity=35.2727272727273, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1788072, Length=283, Percent_Identity=33.2155477031802, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1789293, Length=228, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000771
- InterPro:   IPR011288 [H]

Pfam domain/function: PF01116 F_bP_aldolase [H]

EC number: =4.1.2.40 [H]

Molecular weight: Translated: 31321; Mature: 31190

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS00602 ALDOLASE_CLASS_II_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLVNGRILLNCIQEKHVLAGAFNTTNLETTISILNAIERSGLPNFIQIAPTNAQLSGYD
CCCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH
YIYEIVKRHADKMDIPVSLHLDHGKTLEDVKQAVRAGFTSVMIDGAALPLEENIAFTREA
HHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHEEECCCCCCCHHCHHHHHHH
VDFCKSFGVPVEAELGAILGKEDDHVSEADCKTEPEKVQRFVEETGCDMLAVSIGNVHGL
HHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
EDIPRIDIPLLQRIASVSPVPLVIHGGSGIDADILRSFVNYKVAKVNIASDLRKAFITTV
CCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCEEEEEEHHHHHHHHHHHHH
GKAWVNNNNEANLARVMANAKQAVEDDVYSKIKMMNKNHSAFRKVS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
PLVNGRILLNCIQEKHVLAGAFNTTNLETTISILNAIERSGLPNFIQIAPTNAQLSGYD
CCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH
YIYEIVKRHADKMDIPVSLHLDHGKTLEDVKQAVRAGFTSVMIDGAALPLEENIAFTREA
HHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHEEECCCCCCCHHCHHHHHHH
VDFCKSFGVPVEAELGAILGKEDDHVSEADCKTEPEKVQRFVEETGCDMLAVSIGNVHGL
HHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
EDIPRIDIPLLQRIASVSPVPLVIHGGSGIDADILRSFVNYKVAKVNIASDLRKAFITTV
CCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCEEEEEEHHHHHHHHHHHHH
GKAWVNNNNEANLARVMANAKQAVEDDVYSKIKMMNKNHSAFRKVS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA