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The map label for this gene is yfcI [H]

Identifier: 16767050

GI number: 16767050

Start: 3966637

End: 3967578

Strand: Reverse

Name: yfcI [H]

Synonym: STM3766

Alternate gene names: 16767050

Gene position: 3967578-3966637 (Counterclockwise)

Preceding gene: 16767051

Following gene: 16767048

Centisome position: 81.68

GC content: 50.21

Gene sequence:

>942_bases
ATGAAAAAAAGCCCCACGTCCACGCCTCATGATGCGGTATTCAAAACGTTTTTACGCCATCCGGATACCGCGCGGGATTT
TCTCAATATTCATCTTCCCCATTCGCTAAGAATACGTTGCGATCTGACGACGTTGAAACTGGCGCCGGACAGTTTTATCG
AGAAAAATTTACGCGCGTTTTATTCCGATGTCCTTTGGTCGCTAAAAACGTGTGAAGGCGACGGTTATATCTATGTCGTT
ATAGAGCATCAGAGTACGCCGGACGCGCATATGGCGTTCCGGTTAATGCGTTACGCCACTGCCGCGATGCAGCGCCATCT
GGATGCTGGCCATAAAACGTTACCGCTGGTGATTCCCATGCTGTTTTACCATGGCGCGAAAAGCCCGTATCCCTTTTCGC
TTTGCTGGCTGGATGAGTTTGACGATCCTGCGCTGGCGCGTCAGCTTTATGCGACGGCATTTCCACTGGTAGACATTACG
GTGGTGCCGGATAACGAGATTATGCAGCATCGACGTATCGCGATGCTGGAACTGGTACAAAAGCATATACGTCAACGCGA
CCTGATGGGATTGGTCGAGCGCTTAGCGGTACTTCTGATTACGGGAAACGCTAATGACAGTCAGCTAAAAGCGCTGTTTA
ATTATTTGCTAATACAGCATGGCAGCACGCCTCGTTTTGGCAAGTTTATCCGCGAGGTGGCGCGCCGTGTTCCCCAACAC
AAGGAGAGATTAATGACGATCGTAGACAGAATACGTGAATCGGGGCGCAGAAAAGGTAAGCGTGAAGGCGTGCAACAAGG
CATACAGCAAGGTATACATCAAGGTAAGCAGGAGGAAGCCTTGCGTATTGCGCATACGATGCTGGAACAGGGGATCGAGC
GAGAGATGGTGCTGATGATTACCGGGCTTTCTGACGAAGAGATTAAGGCAAAGCGCCATTAA

Upstream 100 bases:

>100_bases
TCCCTTTCGAGCCTCCTCGCAGGGGTAAATTTTCCTGAATGCTGTCTGTATTTTTGGCGAGTACAGTGGCGTCATCTTAT
TCCTCAGGTGACGGATCGCC

Downstream 100 bases:

>100_bases
ACTTTTCCCTCTTCCGCCCGGTCATCGTGATTATCAACGGCGTTAAGCGGCCCGCGCGCGTCGACGGGAATCGAGGGAGA
TCAGAATCACTGACGAGAGA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKKSPTSTPHDAVFKTFLRHPDTARDFLNIHLPHSLRIRCDLTTLKLAPDSFIEKNLRAFYSDVLWSLKTCEGDGYIYVV
IEHQSTPDAHMAFRLMRYATAAMQRHLDAGHKTLPLVIPMLFYHGAKSPYPFSLCWLDEFDDPALARQLYATAFPLVDIT
VVPDNEIMQHRRIAMLELVQKHIRQRDLMGLVERLAVLLITGNANDSQLKALFNYLLIQHGSTPRFGKFIREVARRVPQH
KERLMTIVDRIRESGRRKGKREGVQQGIQQGIHQGKQEEALRIAHTMLEQGIEREMVLMITGLSDEEIKAKRH

Sequences:

>Translated_313_residues
MKKSPTSTPHDAVFKTFLRHPDTARDFLNIHLPHSLRIRCDLTTLKLAPDSFIEKNLRAFYSDVLWSLKTCEGDGYIYVV
IEHQSTPDAHMAFRLMRYATAAMQRHLDAGHKTLPLVIPMLFYHGAKSPYPFSLCWLDEFDDPALARQLYATAFPLVDIT
VVPDNEIMQHRRIAMLELVQKHIRQRDLMGLVERLAVLLITGNANDSQLKALFNYLLIQHGSTPRFGKFIREVARRVPQH
KERLMTIVDRIRESGRRKGKREGVQQGIQQGIHQGKQEEALRIAHTMLEQGIEREMVLMITGLSDEEIKAKRH
>Mature_313_residues
MKKSPTSTPHDAVFKTFLRHPDTARDFLNIHLPHSLRIRCDLTTLKLAPDSFIEKNLRAFYSDVLWSLKTCEGDGYIYVV
IEHQSTPDAHMAFRLMRYATAAMQRHLDAGHKTLPLVIPMLFYHGAKSPYPFSLCWLDEFDDPALARQLYATAFPLVDIT
VVPDNEIMQHRRIAMLELVQKHIRQRDLMGLVERLAVLLITGNANDSQLKALFNYLLIQHGSTPRFGKFIREVARRVPQH
KERLMTIVDRIRESGRRKGKREGVQQGIQQGIHQGKQEEALRIAHTMLEQGIEREMVLMITGLSDEEIKAKRH

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1788643, Length=313, Percent_Identity=65.1757188498403, Blast_Score=430, Evalue=1e-122,
Organism=Escherichia coli, GI1788577, Length=308, Percent_Identity=64.6103896103896, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI1789816, Length=310, Percent_Identity=60, Blast_Score=384, Evalue=1e-108,
Organism=Escherichia coli, GI1786324, Length=305, Percent_Identity=51.4754098360656, Blast_Score=301, Evalue=5e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 36106; Mature: 36106

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSPTSTPHDAVFKTFLRHPDTARDFLNIHLPHSLRIRCDLTTLKLAPDSFIEKNLRAF
CCCCCCCCCHHHHHHHHHCCCCCHHHHEEEECCCCEEEEEEEEEEEECCHHHHHHHHHHH
YSDVLWSLKTCEGDGYIYVVIEHQSTPDAHMAFRLMRYATAAMQRHLDAGHKTLPLVIPM
HHHHHHHHHEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LFYHGAKSPYPFSLCWLDEFDDPALARQLYATAFPLVDITVVPDNEIMQHRRIAMLELVQ
HHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHH
KHIRQRDLMGLVERLAVLLITGNANDSQLKALFNYLLIQHGSTPRFGKFIREVARRVPQH
HHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHH
KERLMTIVDRIRESGRRKGKREGVQQGIQQGIHQGKQEEALRIAHTMLEQGIEREMVLMI
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEE
TGLSDEEIKAKRH
ECCCCHHHHCCCC
>Mature Secondary Structure
MKKSPTSTPHDAVFKTFLRHPDTARDFLNIHLPHSLRIRCDLTTLKLAPDSFIEKNLRAF
CCCCCCCCCHHHHHHHHHCCCCCHHHHEEEECCCCEEEEEEEEEEEECCHHHHHHHHHHH
YSDVLWSLKTCEGDGYIYVVIEHQSTPDAHMAFRLMRYATAAMQRHLDAGHKTLPLVIPM
HHHHHHHHHEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LFYHGAKSPYPFSLCWLDEFDDPALARQLYATAFPLVDITVVPDNEIMQHRRIAMLELVQ
HHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHH
KHIRQRDLMGLVERLAVLLITGNANDSQLKALFNYLLIQHGSTPRFGKFIREVARRVPQH
HHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHH
KERLMTIVDRIRESGRRKGKREGVQQGIQQGIHQGKQEEALRIAHTMLEQGIEREMVLMI
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEE
TGLSDEEIKAKRH
ECCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]