| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is fidL [H]
Identifier: 16767042
GI number: 16767042
Start: 3957723
End: 3958187
Strand: Reverse
Name: fidL [H]
Synonym: STM3758
Alternate gene names: 16767042
Gene position: 3958187-3957723 (Counterclockwise)
Preceding gene: 39546372
Following gene: 16767036
Centisome position: 81.49
GC content: 44.95
Gene sequence:
>465_bases ATGTTAGCCTGCCTGACGCTACTGTGTCTGGGTGTAGGGCTTGGACATCTTTTTCATTTGTATACGGAAAAGAACCGGGA TCCAGAGAAATGTACGGCGCCTGTGATTGTGTTTTATAACAACACTCAGGCTAACCTGACGCTGGATTTTATGTATTCGC TGAAAAAACGCACTGGGGTGGTTTCCATCAGCGGAACATATTACGTCGATAATAAAATGAGCGGCGTGATCCGCCGTGAT GTTTCCTATGTATGGAGTGAAAATAAAGACAGCACCCATTTTATATCGACGGATATCAACAAAGTCACGCGTGACGAAAC ACTGTCCGATGCGGTTATCGAGACGGTTTTACCCGATTTTTATGTCTATCCAGGGAAAAGTATCAGTTACACCATCCTGA CTCAGGGCCATCGTGGCTTTATGTTCACCATCGGGAAACGCCCGATATTTTTCTGTACGCATTAA
Upstream 100 bases:
>100_bases GTTACGGCATTGATTTGTCAGCAACCTTATAAAACGCGCGGTGATACAGGCTGCGTGACGCTTTTTTTCCGCGGGGTGAC ACATGGGTAAAAAGGCACTG
Downstream 100 bases:
>100_bases GCTTTTTTGGGAGCCGTTCATGAAACCTATCAGCCAAATGAAAGCGTTTCCGGGTAAAAGCCGCTGAAGATCAGCGGCTC TGTTGTTACCTGAATCAGAA
Product: inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MLACLTLLCLGVGLGHLFHLYTEKNRDPEKCTAPVIVFYNNTQANLTLDFMYSLKKRTGVVSISGTYYVDNKMSGVIRRD VSYVWSENKDSTHFISTDINKVTRDETLSDAVIETVLPDFYVYPGKSISYTILTQGHRGFMFTIGKRPIFFCTH
Sequences:
>Translated_154_residues MLACLTLLCLGVGLGHLFHLYTEKNRDPEKCTAPVIVFYNNTQANLTLDFMYSLKKRTGVVSISGTYYVDNKMSGVIRRD VSYVWSENKDSTHFISTDINKVTRDETLSDAVIETVLPDFYVYPGKSISYTILTQGHRGFMFTIGKRPIFFCTH >Mature_154_residues MLACLTLLCLGVGLGHLFHLYTEKNRDPEKCTAPVIVFYNNTQANLTLDFMYSLKKRTGVVSISGTYYVDNKMSGVIRRD VSYVWSENKDSTHFISTDINKVTRDETLSDAVIETVLPDFYVYPGKSISYTILTQGHRGFMFTIGKRPIFFCTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082167, Length=141, Percent_Identity=42.5531914893617, Blast_Score=124, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17524; Mature: 17524
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLACLTLLCLGVGLGHLFHLYTEKNRDPEKCTAPVIVFYNNTQANLTLDFMYSLKKRTGV CHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHCCE VSISGTYYVDNKMSGVIRRDVSYVWSENKDSTHFISTDINKVTRDETLSDAVIETVLPDF EEECCEEEECCCCCHHHHHHHHHEECCCCCCEEEEECCCHHHHCCCHHHHHHHHHHCCCE YVYPGKSISYTILTQGHRGFMFTIGKRPIFFCTH EECCCCCEEEEEEECCCCEEEEEECCCEEEEEEC >Mature Secondary Structure MLACLTLLCLGVGLGHLFHLYTEKNRDPEKCTAPVIVFYNNTQANLTLDFMYSLKKRTGV CHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHCCE VSISGTYYVDNKMSGVIRRDVSYVWSENKDSTHFISTDINKVTRDETLSDAVIETVLPDF EEECCEEEECCCCCHHHHHHHHHEECCCCCCEEEEECCCHHHHCCCHHHHHHHHHHCCCE YVYPGKSISYTILTQGHRGFMFTIGKRPIFFCTH EECCCCCEEEEEEECCCCEEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]