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The map label for this gene is yicI [H]

Identifier: 16767034

GI number: 16767034

Start: 3944576

End: 3946894

Strand: Reverse

Name: yicI [H]

Synonym: STM3749

Alternate gene names: 16767034

Gene position: 3946894-3944576 (Counterclockwise)

Preceding gene: 16767035

Following gene: 16767031

Centisome position: 81.25

GC content: 56.4

Gene sequence:

>2319_bases
ATGAAAATTAGCGACGGAAACTGGCTGATCCAGCCTGGCCTTAATTTGATTCACCCGGTTCAGGTGTTCGACGTTGAACA
GCACGGGAATGAGATGGTGATCTATGCCGCGCCGCGTGATGTCCGCGAACGAACCTGGCAACTGGATACCCCGTTGTTTA
CCCTACGCTTTTTCTCGCCGCAGGAAGGAGTGATAGGTGTACGGATGGAACACTTCCAGGGCGCTTTGGATAACGGCCCA
CATTATCCGCTCAATGTCTTGCAAGATATCAACGTGGAGATGCAGAACAACGCCGAATTTGCCGAACTCAAGAGCGGCAG
CCTGAGCGTGCGCGTCACCAAAGGCGAGATCTGGTCACTGGATTTTCTGCGTAACGGTGTACGTATCACCGGTAGTCAGT
TGAAAAATAACGGCTATGTGCAGGACACCAATAGCGGGCGCAACTACATGTTCGAGCGTCTGGATCTCGGCGTGGGCGAC
ACCGTCTACGGGCTTGGCGAGCGCTTTACCGCGCTGGTGCGTAACGGTCAGACGGTGGAGACCTGGAACCGCGACGGCGG
CACCAGCACCGAGCAATCGTACAAGAATATCCCGTTCTATATCACCAACCGTGGCTACGGTGTGCTGGTGAATCATCCGC
AGTGCGTGTCGTTTGAAATTGGCTCCGAGAAAGTCTCCAAAGTTCAGTTCAGCGTCGAGAGCGAGTATCTGGAATACTTC
GTCATCGACGGCCCGACCCCGAAAGACGTGCTGAACCGCTATACCCAATTTACGGGTCGTCCGGCGCTGCCGCCCGCCTG
GTCGTTTGGCCTGTGGCTGACCACCTCATTCACCACCAACTACGACGAAGCGACCGTTAACAGTTTTATCGACGGTATGG
CCGAGCGCAATCTGCCGCTGCACGTCTTCCACTTCGACTGTTTCTGGATGAAGGCCTTCCAGTGGTGCGATTTTGAATGG
GACCCGGTGACTTTCCCCGATCCGAAAGGGATGATTCGCCGCCTGAAAGCGAAAGGGCTGAAAGTCTGCGTGTGGATTAA
CCCCTACATCGGCCAGAAATCCCCGGTCTTCCAGGAGCTGAAAGAGAAAGGATATTTGCTAAAACGCCCGGACGGCTCCT
TGTGGCAGTGGGATAAATGGCAGCCGGGACTGGCGATTTACGACTTCACCAACCCGCAAGCCTGCGAATGGTATGCCGAC
AAGCTGAAGGGCCTGGTGGAGATGGGAGTGGACTGCTTCAAAACTGACTTCGGCGAACGCATTCCAACGGATGTGCAGTG
GTTTGATGGTTCAGATCCACAGAAAATGCACAACCATTATGCCTACATCTACAACGAACTGGTGTGGAACGTGCTGAAAG
AGACCGTCGGCGTTGAAGAGGCGGTGCTGTTCGCCCGTTCCGCCTCGGTGGGCGCGCAACAGTTCCCGGTGCACTGGGGC
GGCGACTGCTACGCCAACTACGAATCGATGGCGGAAAGCCTGCGCGGCGGGCTGTCCATCGGCCTGTCAGGGTTTGGCTT
CTGGAGTCATGATATTGGCGGATTCGAGAATACCGCGCCGGCGCATGTCTACAAGCGGTGGTGCGCATTCGGCTTGCTCT
CCAGCCACAGCCGCCTGCACGGTAGCAAATCCTACCGGGTTCCGTGGGCCTATGACGACGAGTCCTGTGACGTGGTGCGC
TTCTTCACTGAACAGAAGTGCCGGATGATGCCGTATCTGTATCGGGAAGCGGCGCGTGCCAACGAAGCCGGTACGCCAAT
GATGCGGGCGATGATGCTGGAGTTCCCGGACGATCCGGCGTGTGATTATCTTGATCGCCAGTACATGCTGGGAGATGCGG
TCATGGTAGCGCCGGTATTTAGTGAAGCGGGCGACGTGGAGTTCTACCTGCCAGAAGGCCGCTGGACGCACCTGTGGCGC
AACGATGAAGTGCAGGGCAGCCGCTGGCATAAACAGCAGCATGACTTCCTGAGTCTGCCAGTGTACGTGCGTGACAATAC
ACTACTGGCGCTGGGCAACAATAGCCAGAAGCCCGATTACGCCTGGCATGAGGGTACGGCCTTCCAGTTATTCCATCTGG
ATGACGGCTGCGAAGCGGTCTGCGAAGTCCCTGCTACGGATGGTTCGACAATCTTTACGCTGCAGGCGAAACGCACAGGC
AATACCATTACGGTGAGCGGCGAAGGCAAGGCGCGCAACTGGACGCTGTGTCTGCGTAATATTACGCAGATTAGCGGTAC
CAAATGCGGCTCATATGCGGGAAGTGAACTGGGCGTAGTGGTCACCCCGCAGGGAAATGAAGTGGTGATTACGCTTTAA

Upstream 100 bases:

>100_bases
GCCCGTTCCTGAAAACCATTCTGGAACAACTGGCGCAGGGCGCACACCGTAATGAACAAGAATTTACCCATAAAGAATTG
CAGAACTAAAGGAACAGACT

Downstream 100 bases:

>100_bases
ATCTGAATCGCCGGATGGCGCCGTGAGCTGCGCTTATCCGGCCTACAAATGAGCAAGAACCGTAAGCCCGGTAAGCGCCA
TCGCCACCGGGCAAGCCCTC

Product: alpha-xylosidase YicI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 772; Mature: 772

Protein sequence:

>772_residues
MKISDGNWLIQPGLNLIHPVQVFDVEQHGNEMVIYAAPRDVRERTWQLDTPLFTLRFFSPQEGVIGVRMEHFQGALDNGP
HYPLNVLQDINVEMQNNAEFAELKSGSLSVRVTKGEIWSLDFLRNGVRITGSQLKNNGYVQDTNSGRNYMFERLDLGVGD
TVYGLGERFTALVRNGQTVETWNRDGGTSTEQSYKNIPFYITNRGYGVLVNHPQCVSFEIGSEKVSKVQFSVESEYLEYF
VIDGPTPKDVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEW
DPVTFPDPKGMIRRLKAKGLKVCVWINPYIGQKSPVFQELKEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPQACEWYAD
KLKGLVEMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKETVGVEEAVLFARSASVGAQQFPVHWG
GDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVR
FFTEQKCRMMPYLYREAARANEAGTPMMRAMMLEFPDDPACDYLDRQYMLGDAVMVAPVFSEAGDVEFYLPEGRWTHLWR
NDEVQGSRWHKQQHDFLSLPVYVRDNTLLALGNNSQKPDYAWHEGTAFQLFHLDDGCEAVCEVPATDGSTIFTLQAKRTG
NTITVSGEGKARNWTLCLRNITQISGTKCGSYAGSELGVVVTPQGNEVVITL

Sequences:

>Translated_772_residues
MKISDGNWLIQPGLNLIHPVQVFDVEQHGNEMVIYAAPRDVRERTWQLDTPLFTLRFFSPQEGVIGVRMEHFQGALDNGP
HYPLNVLQDINVEMQNNAEFAELKSGSLSVRVTKGEIWSLDFLRNGVRITGSQLKNNGYVQDTNSGRNYMFERLDLGVGD
TVYGLGERFTALVRNGQTVETWNRDGGTSTEQSYKNIPFYITNRGYGVLVNHPQCVSFEIGSEKVSKVQFSVESEYLEYF
VIDGPTPKDVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEW
DPVTFPDPKGMIRRLKAKGLKVCVWINPYIGQKSPVFQELKEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPQACEWYAD
KLKGLVEMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKETVGVEEAVLFARSASVGAQQFPVHWG
GDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVR
FFTEQKCRMMPYLYREAARANEAGTPMMRAMMLEFPDDPACDYLDRQYMLGDAVMVAPVFSEAGDVEFYLPEGRWTHLWR
NDEVQGSRWHKQQHDFLSLPVYVRDNTLLALGNNSQKPDYAWHEGTAFQLFHLDDGCEAVCEVPATDGSTIFTLQAKRTG
NTITVSGEGKARNWTLCLRNITQISGTKCGSYAGSELGVVVTPQGNEVVITL
>Mature_772_residues
MKISDGNWLIQPGLNLIHPVQVFDVEQHGNEMVIYAAPRDVRERTWQLDTPLFTLRFFSPQEGVIGVRMEHFQGALDNGP
HYPLNVLQDINVEMQNNAEFAELKSGSLSVRVTKGEIWSLDFLRNGVRITGSQLKNNGYVQDTNSGRNYMFERLDLGVGD
TVYGLGERFTALVRNGQTVETWNRDGGTSTEQSYKNIPFYITNRGYGVLVNHPQCVSFEIGSEKVSKVQFSVESEYLEYF
VIDGPTPKDVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEW
DPVTFPDPKGMIRRLKAKGLKVCVWINPYIGQKSPVFQELKEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPQACEWYAD
KLKGLVEMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKETVGVEEAVLFARSASVGAQQFPVHWG
GDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVR
FFTEQKCRMMPYLYREAARANEAGTPMMRAMMLEFPDDPACDYLDRQYMLGDAVMVAPVFSEAGDVEFYLPEGRWTHLWR
NDEVQGSRWHKQQHDFLSLPVYVRDNTLLALGNNSQKPDYAWHEGTAFQLFHLDDGCEAVCEVPATDGSTIFTLQAKRTG
NTITVSGEGKARNWTLCLRNITQISGTKCGSYAGSELGVVVTPQGNEVVITL

Specific function: Can catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose and trehalose [H]

COG id: COG1501

COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 31 family [H]

Homologues:

Organism=Homo sapiens, GI88900491, Length=470, Percent_Identity=29.5744680851064, Blast_Score=179, Evalue=9e-45,
Organism=Homo sapiens, GI38202257, Length=470, Percent_Identity=29.5744680851064, Blast_Score=179, Evalue=1e-44,
Organism=Homo sapiens, GI66346737, Length=427, Percent_Identity=28.8056206088993, Blast_Score=167, Evalue=4e-41,
Organism=Homo sapiens, GI221316699, Length=626, Percent_Identity=23.1629392971246, Blast_Score=136, Evalue=7e-32,
Organism=Homo sapiens, GI119393895, Length=539, Percent_Identity=22.4489795918367, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI119393893, Length=539, Percent_Identity=22.4489795918367, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI119393891, Length=539, Percent_Identity=22.4489795918367, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI157364974, Length=611, Percent_Identity=23.4042553191489, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI153791946, Length=406, Percent_Identity=26.1083743842365, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI310115361, Length=212, Percent_Identity=28.3018867924528, Blast_Score=92, Evalue=2e-18,
Organism=Escherichia coli, GI2367256, Length=772, Percent_Identity=88.4715025906736, Blast_Score=1466, Evalue=0.0,
Organism=Escherichia coli, GI2367323, Length=549, Percent_Identity=24.5901639344262, Blast_Score=182, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17560800, Length=508, Percent_Identity=25, Blast_Score=155, Evalue=8e-38,
Organism=Caenorhabditis elegans, GI17560798, Length=508, Percent_Identity=25.1968503937008, Blast_Score=155, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI71991189, Length=444, Percent_Identity=27.2522522522523, Blast_Score=151, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI71985706, Length=242, Percent_Identity=24.3801652892562, Blast_Score=72, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI32563849, Length=318, Percent_Identity=24.5283018867925, Blast_Score=72, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319706, Length=510, Percent_Identity=22.156862745098, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24643749, Length=497, Percent_Identity=24.3460764587525, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24643753, Length=497, Percent_Identity=24.3460764587525, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24643751, Length=497, Percent_Identity=24.3460764587525, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24643746, Length=497, Percent_Identity=24.3460764587525, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI21357605, Length=497, Percent_Identity=24.3460764587525, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24650054, Length=330, Percent_Identity=29.0909090909091, Blast_Score=112, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011013
- InterPro:   IPR000322
- InterPro:   IPR017853 [H]

Pfam domain/function: PF01055 Glyco_hydro_31 [H]

EC number: NA

Molecular weight: Translated: 87814; Mature: 87814

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISDGNWLIQPGLNLIHPVQVFDVEQHGNEMVIYAAPRDVRERTWQLDTPLFTLRFFSP
CEECCCCEEECCCCCEECCEEEEEEECCCCEEEEEECCCHHHHHCEECCCCEEEEEEECC
QEGVIGVRMEHFQGALDNGPHYPLNVLQDINVEMQNNAEFAELKSGSLSVRVTKGEIWSL
CCCEEEEEHHHHCCCCCCCCCCCHHHHHCCCEEECCCCCCEEECCCCEEEEEECCCEEEE
DFLRNGVRITGSQLKNNGYVQDTNSGRNYMFERLDLGVGDTVYGLGERFTALVRNGQTVE
HHHHCCEEEECHHHCCCCEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEE
TWNRDGGTSTEQSYKNIPFYITNRGYGVLVNHPQCVSFEIGSEKVSKVQFSVESEYLEYF
ECCCCCCCCCHHHHCCCCEEEECCCCEEEECCCEEEEEECCCCCCEEEEEEEECCEEEEE
VIDGPTPKDVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPL
EECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCE
HVFHFDCFWMKAFQWCDFEWDPVTFPDPKGMIRRLKAKGLKVCVWINPYIGQKSPVFQEL
EEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHH
KEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPQACEWYADKLKGLVEMGVDCFKTDFGER
HHCCCEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCC
IPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKETVGVEEAVLFARSASVGAQQFPVHWG
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCCCCCCCCEEEC
GDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH
CCCEECHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHC
GSKSYRVPWAYDDESCDVVRFFTEQKCRMMPYLYREAARANEAGTPMMRAMMLEFPDDPA
CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
CDYLDRQYMLGDAVMVAPVFSEAGDVEFYLPEGRWTHLWRNDEVQGSRWHKQQHDFLSLP
CHHHCCHHHHCCEEEEEEHHCCCCCEEEECCCCCEEEEECCCCCCCCHHHHCCCCEEECE
VYVRDNTLLALGNNSQKPDYAWHEGTAFQLFHLDDGCEAVCEVPATDGSTIFTLQAKRTG
EEEECCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHEECCCCCCCEEEEEEECCCC
NTITVSGEGKARNWTLCLRNITQISGTKCGSYAGSELGVVVTPQGNEVVITL
CEEEEECCCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEC
>Mature Secondary Structure
MKISDGNWLIQPGLNLIHPVQVFDVEQHGNEMVIYAAPRDVRERTWQLDTPLFTLRFFSP
CEECCCCEEECCCCCEECCEEEEEEECCCCEEEEEECCCHHHHHCEECCCCEEEEEEECC
QEGVIGVRMEHFQGALDNGPHYPLNVLQDINVEMQNNAEFAELKSGSLSVRVTKGEIWSL
CCCEEEEEHHHHCCCCCCCCCCCHHHHHCCCEEECCCCCCEEECCCCEEEEEECCCEEEE
DFLRNGVRITGSQLKNNGYVQDTNSGRNYMFERLDLGVGDTVYGLGERFTALVRNGQTVE
HHHHCCEEEECHHHCCCCEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEE
TWNRDGGTSTEQSYKNIPFYITNRGYGVLVNHPQCVSFEIGSEKVSKVQFSVESEYLEYF
ECCCCCCCCCHHHHCCCCEEEECCCCEEEECCCEEEEEECCCCCCEEEEEEEECCEEEEE
VIDGPTPKDVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPL
EECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCE
HVFHFDCFWMKAFQWCDFEWDPVTFPDPKGMIRRLKAKGLKVCVWINPYIGQKSPVFQEL
EEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHH
KEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPQACEWYADKLKGLVEMGVDCFKTDFGER
HHCCCEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCC
IPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKETVGVEEAVLFARSASVGAQQFPVHWG
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCCCCCCCCEEEC
GDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH
CCCEECHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHC
GSKSYRVPWAYDDESCDVVRFFTEQKCRMMPYLYREAARANEAGTPMMRAMMLEFPDDPA
CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
CDYLDRQYMLGDAVMVAPVFSEAGDVEFYLPEGRWTHLWRNDEVQGSRWHKQQHDFLSLP
CHHHCCHHHHCCEEEEEEHHCCCCCEEEECCCCCEEEEECCCCCCCCHHHHCCCCEEECE
VYVRDNTLLALGNNSQKPDYAWHEGTAFQLFHLDDGCEAVCEVPATDGSTIFTLQAKRTG
EEEECCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHEECCCCCCCEEEEEEECCCC
NTITVSGEGKARNWTLCLRNITQISGTKCGSYAGSELGVVVTPQGNEVVITL
CEEEEECCCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]