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The map label for this gene is rfaK

Identifier: 16766999

GI number: 16766999

Start: 3909561

End: 3910706

Strand: Reverse

Name: rfaK

Synonym: STM3714

Alternate gene names: 16766999

Gene position: 3910706-3909561 (Counterclockwise)

Preceding gene: 16767000

Following gene: 16766994

Centisome position: 80.51

GC content: 41.19

Gene sequence:

>1146_bases
ATGATTAAAAAAATCATATTTACTGTTACTCCTATATTTTCAATTCCTCCTCGTGGTGCGGCTGCGGTAGAAACCTGGAT
TTACCAGGTTGCAAAACGACTATCAATACCGAATGCTATTGCTTGTATAAAGAATGCTGGCTATCCTGAATATAATAAAA
TAAACGATAACTGTGATATTCATTACATCGGGTTTAGTAAAGTTTATAAGCGTCTTTTTCAGAAATGGACTCGTCTCGAC
CCACTACCCTATTCCCAGCGCATCCTTAATATTAGAGATAAAGTGACTACCCAGGAAGATAGCGTCATTGTTATTCATAA
TAGTATGAAACTGTATCGGCAGATCAGAGAGCGCAATCCGAATGCAAAACTGGTTATGCACATGCATAATGCATTTGAAC
CAGAACTTCCTGATAATGATGCAAAAATTATCGTGCCCAGTCAGTTTCTTAAAGCGTTTTATGAAGAAAGATTGCCCGCC
GCTGCTGTTAGTATTGTGCCTAATGGTTTTTGTGCTGAGACTTATAAAAGAAACCCACAAGATAATCTTCGTCAGCAATT
AAATATTGCGGAAGATGCCACCGTTCTCTTGTATGCCGGGAGAATTTCGCCTGATAAAGGCATCCTGTTGCTTTTGCAGG
CGTTCAAACAATTACGTACCTTAAGAAGTAATATTAAACTTGTCGTTGTTGGCGACCCTTATGCAAGCCGCAAGGGTGAA
AAAGCAGAGTATCAAAAGAAAGTACTGGACGCCGCAAAAGAGATTGGAACGGATTGTATTATGGCTGGGGGGCAATCTCC
TGACCAGATGCATAACTTCTATCATATAGCCGATCTGGTTATTGTGCCATCTCAGGTTGAAGAAGCATTTTGCATGGTGG
CTGTAGAAGCGATGGCAGCAGGAAAAGCGGTTCTTGCCAGCAAAAAAGGGGGGATTAGCGAATTTGTGTTAGATGGCATA
ACGGGCTATCACCTCGCAGAACCTATGTCGAGCGACAGTATAATTAATGATATTAACCGTGCGCTTGCTGATAAGGAACG
CCACCAGATTGCCGAAAAAGCAAAATCCCTGGTGTTTTCAAAATACAGTTGGGAAAATGTAGCGCAGCGTTTCGAGGAAC
AAATGAAAAACTGGTTTGATAAGTGA

Upstream 100 bases:

>100_bases
ACACTAGATAAATCATTATTTTTCGTTGCTTCGGCACGCATTTCTTTTTTTTATAACATTTCTTTTTCTATAAAGTTAAC
TATTCTGGATTATAGCTATT

Downstream 100 bases:

>100_bases
TTGAGTCCTGATGATGGAAAACGCGCTGATACCGTAATAAGTATCAGCGCGTTTTTTTATCTATTTCTTAGCGCCAGCAG
AAAACCGGTAATGATACCAA

Product: hexose transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIKNAGYPEYNKINDNCDIHYIGFSKVYKRLFQKWTRLD
PLPYSQRILNIRDKVTTQEDSVIVIHNSMKLYRQIRERNPNAKLVMHMHNAFEPELPDNDAKIIVPSQFLKAFYEERLPA
AAVSIVPNGFCAETYKRNPQDNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQLRTLRSNIKLVVVGDPYASRKGE
KAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHIADLVIVPSQVEEAFCMVAVEAMAAGKAVLASKKGGISEFVLDGI
TGYHLAEPMSSDSIINDINRALADKERHQIAEKAKSLVFSKYSWENVAQRFEEQMKNWFDK

Sequences:

>Translated_381_residues
MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIKNAGYPEYNKINDNCDIHYIGFSKVYKRLFQKWTRLD
PLPYSQRILNIRDKVTTQEDSVIVIHNSMKLYRQIRERNPNAKLVMHMHNAFEPELPDNDAKIIVPSQFLKAFYEERLPA
AAVSIVPNGFCAETYKRNPQDNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQLRTLRSNIKLVVVGDPYASRKGE
KAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHIADLVIVPSQVEEAFCMVAVEAMAAGKAVLASKKGGISEFVLDGI
TGYHLAEPMSSDSIINDINRALADKERHQIAEKAKSLVFSKYSWENVAQRFEEQMKNWFDK
>Mature_381_residues
MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIKNAGYPEYNKINDNCDIHYIGFSKVYKRLFQKWTRLD
PLPYSQRILNIRDKVTTQEDSVIVIHNSMKLYRQIRERNPNAKLVMHMHNAFEPELPDNDAKIIVPSQFLKAFYEERLPA
AAVSIVPNGFCAETYKRNPQDNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQLRTLRSNIKLVVVGDPYASRKGE
KAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHIADLVIVPSQVEEAFCMVAVEAMAAGKAVLASKKGGISEFVLDGI
TGYHLAEPMSSDSIINDINRALADKERHQIAEKAKSLVFSKYSWENVAQRFEEQMKNWFDK

Specific function: Adds the terminal N-acetyl-D-glucosamine group on the glucose(II) group of LPS

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WAAK_SALTY (P26470)

Other databases:

- EMBL:   M73826
- EMBL:   AE006468
- PIR:   C41317
- RefSeq:   NP_462614.1
- ProteinModelPortal:   P26470
- PRIDE:   P26470
- GeneID:   1255238
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM3714
- NMPDR:   fig|99287.1.peg.3590
- HOGENOM:   HBG467986
- OMA:   SAIACIK
- ProtClustDB:   PRK15484
- BioCyc:   STYP99287:STM3714-MONOMER
- BRENDA:   2.4.1.56
- GO:   GO:0016020
- InterPro:   IPR001296

Pfam domain/function: PF00534 Glycos_transf_1

EC number: =2.4.1.56

Molecular weight: Translated: 43152; Mature: 43152

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIKNAGYPEYNKINDNCDI
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCE
HYIGFSKVYKRLFQKWTRLDPLPYSQRILNIRDKVTTQEDSVIVIHNSMKLYRQIRERNP
EEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCC
NAKLVMHMHNAFEPELPDNDAKIIVPSQFLKAFYEERLPAAAVSIVPNGFCAETYKRNPQ
CCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHCCCCH
DNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQLRTLRSNIKLVVVGDPYASRKGE
HHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCC
KAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHIADLVIVPSQVEEAFCMVAVEAMAA
HHHHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHC
GKAVLASKKGGISEFVLDGITGYHLAEPMSSDSIINDINRALADKERHQIAEKAKSLVFS
CHHHHHCCCCCHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYSWENVAQRFEEQMKNWFDK
HCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIKNAGYPEYNKINDNCDI
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCE
HYIGFSKVYKRLFQKWTRLDPLPYSQRILNIRDKVTTQEDSVIVIHNSMKLYRQIRERNP
EEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCC
NAKLVMHMHNAFEPELPDNDAKIIVPSQFLKAFYEERLPAAAVSIVPNGFCAETYKRNPQ
CCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHCCCCH
DNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQLRTLRSNIKLVVVGDPYASRKGE
HHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCC
KAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHIADLVIVPSQVEEAFCMVAVEAMAA
HHHHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHC
GKAVLASKKGGISEFVLDGITGYHLAEPMSSDSIINDINRALADKERHQIAEKAKSLVFS
CHHHHHCCCCCHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYSWENVAQRFEEQMKNWFDK
HCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1657881; 11677609