Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
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Accession | NC_003197 |
Length | 4,857,432 |
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The map label for this gene is yafP [H]
Identifier: 16766939
GI number: 16766939
Start: 3838674
End: 3839141
Strand: Reverse
Name: yafP [H]
Synonym: STM3653
Alternate gene names: 16766939
Gene position: 3839141-3838674 (Counterclockwise)
Preceding gene: 16766940
Following gene: 16766938
Centisome position: 79.04
GC content: 41.67
Gene sequence:
>468_bases ATGAAAATCAGAAGGTTCAGTAATGGGGATGAAATATCGTTATTCAGAGTTTTTTTCTCATCTGTACATACGATCGCATC ACACTACTACACACGTGAACAAATTGATGCTTGGGCCCCAGCAGATATCGACCTGGAGCGATGGGCCAATCACATTAAGG AATTACAACCTTTTGTTGTAGAGCTGGATGGTGAAATAGCTGGATATGCAGATGTTCAACCAAATGGATACATTGATCAT TTCTTTGTATCAGGAACCTATTCAAGACAGGGGGTAGGGACACTACTGATGAATTGCATTCATGAGGAAGCCAGACAGCG TGGAATTAGTGAACTTACTTCAAATGTAAGTAAGGCTGCGGAAGTGTTCTTTCTACGACACGGCTTTCATATAGTGGAGC GAGGCTTTCCTATTTGCCGTGGAGTGACATTACAAAATGCTCTGATGAGGAAATGTTTGGCGAAATAA
Upstream 100 bases:
>100_bases GTGGATACGGTCACGCAAATGTCTGCTATGAGCGAGGAACGGACGCCCTATTTCACAAAAATTAGTATTGTTCTACAAGT AACTCTCACAATGAGGTTTT
Downstream 100 bases:
>100_bases TAGTCAGCCTGCAGAAAGGCAGCATTGTTCTTTTGCCTTGTTGAACTCAGTAAACCGCTACAATGAGCAATTTCCGCTTC TGGCACAAAGCGAACATCAG
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKIRRFSNGDEISLFRVFFSSVHTIASHYYTREQIDAWAPADIDLERWANHIKELQPFVVELDGEIAGYADVQPNGYIDH FFVSGTYSRQGVGTLLMNCIHEEARQRGISELTSNVSKAAEVFFLRHGFHIVERGFPICRGVTLQNALMRKCLAK
Sequences:
>Translated_155_residues MKIRRFSNGDEISLFRVFFSSVHTIASHYYTREQIDAWAPADIDLERWANHIKELQPFVVELDGEIAGYADVQPNGYIDH FFVSGTYSRQGVGTLLMNCIHEEARQRGISELTSNVSKAAEVFFLRHGFHIVERGFPICRGVTLQNALMRKCLAK >Mature_155_residues MKIRRFSNGDEISLFRVFFSSVHTIASHYYTREQIDAWAPADIDLERWANHIKELQPFVVELDGEIAGYADVQPNGYIDH FFVSGTYSRQGVGTLLMNCIHEEARQRGISELTSNVSKAAEVFFLRHGFHIVERGFPICRGVTLQNALMRKCLAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1786428, Length=150, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 17722; Mature: 17722
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRRFSNGDEISLFRVFFSSVHTIASHYYTREQIDAWAPADIDLERWANHIKELQPFVV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEE ELDGEIAGYADVQPNGYIDHFFVSGTYSRQGVGTLLMNCIHEEARQRGISELTSNVSKAA EECCCCCCEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVFFLRHGFHIVERGFPICRGVTLQNALMRKCLAK HHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MKIRRFSNGDEISLFRVFFSSVHTIASHYYTREQIDAWAPADIDLERWANHIKELQPFVV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEE ELDGEIAGYADVQPNGYIDHFFVSGTYSRQGVGTLLMNCIHEEARQRGISELTSNVSKAA EECCCCCCEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVFFLRHGFHIVERGFPICRGVTLQNALMRKCLAK HHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7596361; 9278503 [H]