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The map label for this gene is ygeD [H]

Identifier: 16766311

GI number: 16766311

Start: 3166677

End: 3167879

Strand: Reverse

Name: ygeD [H]

Synonym: STM3009

Alternate gene names: 16766311

Gene position: 3167879-3166677 (Counterclockwise)

Preceding gene: 16766312

Following gene: 39980858

Centisome position: 65.22

GC content: 58.6

Gene sequence:

>1203_bases
ATGAGTGAGTCAGTACGTACTAACACCTCCATCTGGTCGAAAGGGATGCTGTCGGTGATTGTCGCGCAGTTTCTCTCGGC
TTTTGGCGATAATGCGCTGCTGTTCGCGACGCTGGCACTGCTGAAAGCTCAGTTTTACCCGGACTGGAGCCAGCCTGTTT
TGCAAATGGTGTTTGTGGGCGCTTACATTCTTTTTGCGCCGTTTGTCGGCCAGATAGCGGACAGCTTTGCCAAAGGCCGG
GTGATGATGGTCGCCAATGGTCTTAAACTGGCGGGAGCGGCAGGTATCTGCCTCGGCATAAATCCTTTTGTCGGTTATAC
GTTGGTCGGGATTGGCGCGGCGGCTTATTCTCCGGCGAAATACGGTATTCTGGGCGAACTGACGACGGGCGATAAGCTGG
TGAAAGCCAATGGCCTGATGGAAGCCTCTACGATTGCGGCGATTTTGCTCGGTTCCGTCGCGGGCGGCGTATTGGCCGAC
TGGCATGTCATCGCTGCGCTGGTTGCCTGCGCGTTGGCCTACGCTGGCGCAGTGGCGGCGAACCTGTTTATCCCGAAGCT
TGTGGCGGCGCGTCCAGGACAATCCTGGCGGTTGTCGGCGATGACGCGTAGTTTCTTCAGCGCTTGCGTTGTCCTTTGGC
GTAACGGTGAAACGCGTTTTTCGCTGGTGGGGACCGGGCTATTCTGGGGCGCAGGCGTGACGCTGCGTTTTCTGCTGGTG
CTGTGGGTGCCGGTGGCGCTGGGGATTACGGATAACGCCACGCCGACTTACCTGAACGCCATGGTGGCGGTAGGCATTGT
GGTCGGCGCGGGCGCGGCGGCAAAACTGGTGACGCTGGAGACCGTATCGCGCTGTATGCCCGCCGGGATTTTGATTGGCG
TTGTGGTTGCGATCTTCTCATTACAGCACGCATTGCTGCCTGCTTATGCCTTGTTGCTGTTGATAGGTATGCTGGGCGGC
TTTTTTGTGGTGCCGCTCAACGCTTTGCTCCAGGAGCGCGGTAAGAAGAGCGTTGGCGCCGGGAATGCCATTGCCGTACA
AAATCTGGGCGAGAATAGCGCCATGCTATTAATGCTGGGACTGTACTCGCTGGCGGTGCTGGTTGGCGTTCCGGCAGTGG
CGATAGGTATCGGCTTTGGCGTGCTGTTCGCGCTGGCGATCGCGGCGCTGTGGATCTGGCAGCGCCGGCAGGCATCATAC
TGA

Upstream 100 bases:

>100_bases
CCGCGTGATATCCGTTATCTGAAGCAGCTTCCCTTGCTTGGCAGCGGGAAACCCGATTTTGTGACGCTGAAAAGTTGGGT
GGATGCGCCGGAACAACATC

Downstream 100 bases:

>100_bases
GTGAATATGCCGGGCGGCGAGTGCGTGTTATCGGGCTTACATTGTCTCTGTAAGCCCGGAAGCGTAGCGCCACCGGGCAC
TGACCATCACGGCGCCGGAT

Product: lysophospholipid transporter LplT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSESVRTNTSIWSKGMLSVIVAQFLSAFGDNALLFATLALLKAQFYPDWSQPVLQMVFVGAYILFAPFVGQIADSFAKGR
VMMVANGLKLAGAAGICLGINPFVGYTLVGIGAAAYSPAKYGILGELTTGDKLVKANGLMEASTIAAILLGSVAGGVLAD
WHVIAALVACALAYAGAVAANLFIPKLVAARPGQSWRLSAMTRSFFSACVVLWRNGETRFSLVGTGLFWGAGVTLRFLLV
LWVPVALGITDNATPTYLNAMVAVGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVAIFSLQHALLPAYALLLLIGMLGG
FFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGLYSLAVLVGVPAVAIGIGFGVLFALAIAALWIWQRRQASY

Sequences:

>Translated_400_residues
MSESVRTNTSIWSKGMLSVIVAQFLSAFGDNALLFATLALLKAQFYPDWSQPVLQMVFVGAYILFAPFVGQIADSFAKGR
VMMVANGLKLAGAAGICLGINPFVGYTLVGIGAAAYSPAKYGILGELTTGDKLVKANGLMEASTIAAILLGSVAGGVLAD
WHVIAALVACALAYAGAVAANLFIPKLVAARPGQSWRLSAMTRSFFSACVVLWRNGETRFSLVGTGLFWGAGVTLRFLLV
LWVPVALGITDNATPTYLNAMVAVGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVAIFSLQHALLPAYALLLLIGMLGG
FFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGLYSLAVLVGVPAVAIGIGFGVLFALAIAALWIWQRRQASY
>Mature_399_residues
SESVRTNTSIWSKGMLSVIVAQFLSAFGDNALLFATLALLKAQFYPDWSQPVLQMVFVGAYILFAPFVGQIADSFAKGRV
MMVANGLKLAGAAGICLGINPFVGYTLVGIGAAAYSPAKYGILGELTTGDKLVKANGLMEASTIAAILLGSVAGGVLADW
HVIAALVACALAYAGAVAANLFIPKLVAARPGQSWRLSAMTRSFFSACVVLWRNGETRFSLVGTGLFWGAGVTLRFLLVL
WVPVALGITDNATPTYLNAMVAVGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVAIFSLQHALLPAYALLLLIGMLGGF
FVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGLYSLAVLVGVPAVAIGIGFGVLFALAIAALWIWQRRQASY

Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]

Homologues:

Organism=Escherichia coli, GI1789200, Length=397, Percent_Identity=88.6649874055416, Blast_Score=663, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41586; Mature: 41455

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESVRTNTSIWSKGMLSVIVAQFLSAFGDNALLFATLALLKAQFYPDWSQPVLQMVFVG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AYILFAPFVGQIADSFAKGRVMMVANGLKLAGAAGICLGINPFVGYTLVGIGAAAYSPAK
HHHHHHHHHHHHHHHHHCCEEEEEECCCEECCCCCEEEECCHHHHHHHHHHHHHHCCCCC
YGILGELTTGDKLVKANGLMEASTIAAILLGSVAGGVLADWHVIAALVACALAYAGAVAA
CCCEEECCCCCCEEHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
NLFIPKLVAARPGQSWRLSAMTRSFFSACVVLWRNGETRFSLVGTGLFWGAGVTLRFLLV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHH
LWVPVALGITDNATPTYLNAMVAVGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVAIFS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LQHALLPAYALLLLIGMLGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHH
LYSLAVLVGVPAVAIGIGFGVLFALAIAALWIWQRRQASY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SESVRTNTSIWSKGMLSVIVAQFLSAFGDNALLFATLALLKAQFYPDWSQPVLQMVFVG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AYILFAPFVGQIADSFAKGRVMMVANGLKLAGAAGICLGINPFVGYTLVGIGAAAYSPAK
HHHHHHHHHHHHHHHHHCCEEEEEECCCEECCCCCEEEECCHHHHHHHHHHHHHHCCCCC
YGILGELTTGDKLVKANGLMEASTIAAILLGSVAGGVLADWHVIAALVACALAYAGAVAA
CCCEEECCCCCCEEHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
NLFIPKLVAARPGQSWRLSAMTRSFFSACVVLWRNGETRFSLVGTGLFWGAGVTLRFLLV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHH
LWVPVALGITDNATPTYLNAMVAVGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVAIFS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LQHALLPAYALLLLIGMLGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHH
LYSLAVLVGVPAVAIGIGFGVLFALAIAALWIWQRRQASY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA