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The map label for this gene is ppdC [H]

Identifier: 16766299

GI number: 16766299

Start: 3156099

End: 3156419

Strand: Reverse

Name: ppdC [H]

Synonym: STM2997

Alternate gene names: 16766299

Gene position: 3156419-3156099 (Counterclockwise)

Preceding gene: 16766300

Following gene: 16766298

Centisome position: 64.98

GC content: 53.58

Gene sequence:

>321_bases
ATGTCGCATCCCCTGAATTTACAACGCGGGTTTAGCCTCCCGGAAGTTTTAGTGGCGATGGTTCTAATGGTAATGATCGT
CACCGCGCTGTCAGGCTATCAGCGGGTATTAATGCACAGTTTTGCATTACGACACCAGTATCTCCAGATCTGGCGGCAGG
CGTGGCAGCAAACGGCGCTGTATCCATTTTCGCCTGCTGACGACTGGAAGGCCAACCGGATGCAGACAACGCAATCGGGA
TGTGTCAGCATCAGCGTCACGATGGTTTCACCCTCTGGCAGGCAGGGGCAGATGACGCGCTTGCATTGTCCAAATCGTTA
A

Upstream 100 bases:

>100_bases
ACGGCATGACGTTATGGCGTTTGGGCAACGTCATTCAGGGAAGCATTGTCTTTTCTCCCCACGGCTGGAGCGATTTTTGT
CCGTTAAAAGAGGTGGCGTT

Downstream 100 bases:

>100_bases
TCGTCAGGAGTAATTATGTTAAGGGTCTACCACTCCAATCGTCTGGATGTGCTGGAAGCGTTGATGGAGTTCATCGTCGA
ACGCGAGCGGCTGGATGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSHPLNLQRGFSLPEVLVAMVLMVMIVTALSGYQRVLMHSFALRHQYLQIWRQAWQQTALYPFSPADDWKANRMQTTQSG
CVSISVTMVSPSGRQGQMTRLHCPNR

Sequences:

>Translated_106_residues
MSHPLNLQRGFSLPEVLVAMVLMVMIVTALSGYQRVLMHSFALRHQYLQIWRQAWQQTALYPFSPADDWKANRMQTTQSG
CVSISVTMVSPSGRQGQMTRLHCPNR
>Mature_105_residues
SHPLNLQRGFSLPEVLVAMVLMVMIVTALSGYQRVLMHSFALRHQYLQIWRQAWQQTALYPFSPADDWKANRMQTTQSGC
VSISVTMVSPSGRQGQMTRLHCPNR

Specific function: Not yet known [H]

COG id: COG4967

COG function: function code NU; Tfp pilus assembly protein PilV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789187, Length=106, Percent_Identity=69.811320754717, Blast_Score=158, Evalue=8e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022204
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF12528 DUF3728 [H]

EC number: NA

Molecular weight: Translated: 12120; Mature: 11989

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPLNLQRGFSLPEVLVAMVLMVMIVTALSGYQRVLMHSFALRHQYLQIWRQAWQQTAL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YPFSPADDWKANRMQTTQSGCVSISVTMVSPSGRQGQMTRLHCPNR
CCCCCCCCCCCCHHHCCCCCCEEEEEEEECCCCCCCCEEECCCCCC
>Mature Secondary Structure 
SHPLNLQRGFSLPEVLVAMVLMVMIVTALSGYQRVLMHSFALRHQYLQIWRQAWQQTAL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YPFSPADDWKANRMQTTQSGCVSISVTMVSPSGRQGQMTRLHCPNR
CCCCCCCCCCCCHHHCCCCCCEEEEEEEECCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503; 7934814 [H]