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The map label for this gene is relA [H]

Identifier: 16766262

GI number: 16766262

Start: 3102880

End: 3105114

Strand: Reverse

Name: relA [H]

Synonym: STM2956

Alternate gene names: 16766262

Gene position: 3105114-3102880 (Counterclockwise)

Preceding gene: 16766263

Following gene: 39546352

Centisome position: 63.93

GC content: 55.57

Gene sequence:

>2235_bases
ATGGTCGCGGTAAGAAGTGCACATATTAATAAAGCTGGTGAATTTGATCCGAAGAAGTGGATCGCAAGCCTGGGAATTTC
CAGCCAGCAGTCGTGTGAGCGCTTAGCCGAAACCTGGGCGTATTGCCTGCAACAGACACAAGGACATCCGGATGCGGATC
TGTTGCTGTGGCGTGGCGTGGAGATGGTAGAAATTCTTTCCACGCTGAGTATGGATATCGACACGCTGCGGGCGGCGCTA
CTGTTCCCTCTGGCCGACGCCAACGTAGTCAGCGAAGATGTACTGCGCGAAAGCGTCGGCAAATCTATCGTTACCCTGAT
TCATGGCGTGCGCGATATGGCGGCGATCCGTCAGCTAAACGCCACTCATAACGACTCTGTTTCTTCGGAGCAGGTTGATA
ACGTCCGTCGAATGTTATTGGCGATGGTGGATGATTTCCGCTGCGTGGTGATCAAACTGGCCGAGCGAATCGCTCATTTG
CGCGAAGTGAAAGAGGCGCCGGAAGATGAGCGCGTGCTGGCGGCGAAAGAATGTACCAACATCTATGCGCCGCTCGCCAA
TCGTCTGGGCATCGGGCAACTGAAGTGGGAACTGGAAGACTACTGTTTCCGCTACCTGCATCCGGCGGAATACAAACGCA
TCGCCAAACTGCTGCATGAGCGCCGTCTCGATCGCGAACATTACATCGAAGAGTTTGTTGGACATCTGCGCGCCGAAATG
AAAAACGAAGGCGTGCAGGCGGAGGTCTACGGACGACCAAAACATATTTATAGCATCTGGCGCAAAATGCAGAAAAAGCA
TCTGGCGTTTGATGAACTCTTTGACGTGCGCGCCGTGCGTATTGTCGCTGAACGTCTGCAGGACTGCTACGCCGCGTTGG
GGATAGTGCATACGCACTATCGTCACCTGCCGGATGAATTCGATGATTATGTCGCTAACCCGAAACCGAACGGTTACCAG
TCTATCCACACCGTGGTCCTGGGACCGGGCGGTAAAACCGTTGAGATCCAGATCCGTACCAAACAGATGCATGAAGACGC
CGAACTGGGCGTGGCGGCACACTGGAAGTATAAAGAAGGCGCCGCGTCCGGCGGCGTGCGCTCCGGTCATGAAGACAGAA
TTGCGTGGCTGCGTAAGCTGATCGCCTGGCAGGAAGAGATGGCCGATTCCGGCGAAATGCTGGATGAAGTGCGCAGCCAG
GTGTTTGACGATCGGGTCTACGTTTTTACGCCAAAAGGCGACGTGGTTGACTTGCCTGCCGGATCTACGCCGCTCGATTT
TGCTTACCACATCCACAGCGATGTTGGGCACCGCTGCATTGGCGCTAAAATCGGCGGCCGTATTGTGCCATTCACCTATC
AGTTGCAGATGGGTGATCAAATTGAAATTATCACTCAGAAGCAGCCGAATCCCAGCCGCGACTGGCTGAATCCAAACCTG
GGCTATGTGACGACCAGCCGCGGACGCTCGAAAATTCACGCCTGGTTCCGCAAGCAGGATCGTGACAAAAATATCCAGGC
TGGACGGCAGATCCTCGACGATGAGCTGGCGCATTTGGGGATTAGCCTGAAAGAGGCCGAAAAACATCTGCTGCCGCGCT
ACAACTTTAATGAGCTGGAAGAGTTGCTGGCGGCGATAGGCGGCGGCGATATCCGTCTTAATCAGATGGTGAATTTCCTG
CAATCACAGTTCAATAAGCCGAGTGCAGAGGAGCAGGATGCAGCGGCGCTGAAACAGCTTCAGCAAAAAACATACGCGCC
GCAAAATCGTCGTAAAGACGACGGGCGCGTGGTGGTAGAAGGCGTGGGTAATTTGATGCACCACATCGCCCGCTGCTGCC
AGCCGATTCCGGGGGATGAAATTGTCGGCTTCATTACTCAAGGGCGAGGGATTTCCGTGCACCGGGCCGACTGCGAACAG
CTGGCGGAACTGCGCTCCCATGCGCCGGAGCGGATCGTAGAGGCGGTATGGGGCGAGAGCTACTCGGCGGGATATTCGCT
GGTGGTGCGCGTCCAGGCCAACGATCGCAGCGGCTTGCTACGCGATATCACCACCATTCTGGCTAACGAAAAAGTCAACG
TGCTGGGCGTCGCCAGCCGCAGCGACATTAAACAGCAGATCGCCACCATTGATATGACCATCGAGATCTACAACCTGCAG
GTGCTGGGCCGGGTGCTCGGTAAGCTGAACCAGGTGCCGGATGTGATTGATGCACGGCGACTGCACGGGGGGTAA

Upstream 100 bases:

>100_bases
CCCGCACACAGGACATCTGGAATCAATGGTTCTGTTCGAGCGCATGTAATGATTACCGGCTTACCGACTTCGGTAGGCCT
GGTCCCTTAAGGAGAGGACG

Downstream 100 bases:

>100_bases
ACCCCAGACAGTAATCATGTAGCGGCTTTGCTACTCGTTCAGCAAAGCCGCATTAGCAACCCCATAAGCATGAGATATGG
GGTATGTTTTTGACGTACAT

Product: GDP/GTP pyrophosphokinase

Products: NA

Alternate protein names: (p)ppGpp synthase; ATP:GTP 3'-pyrophosphotransferase; ppGpp synthase I [H]

Number of amino acids: Translated: 744; Mature: 744

Protein sequence:

>744_residues
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAAL
LFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
REVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEM
KNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQ
SIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQ
VFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNL
GYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFL
QSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQ
LAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQ
VLGRVLGKLNQVPDVIDARRLHGG

Sequences:

>Translated_744_residues
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAAL
LFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
REVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEM
KNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQ
SIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQ
VFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNL
GYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFL
QSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQ
LAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQ
VLGRVLGKLNQVPDVIDARRLHGG
>Mature_744_residues
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAAL
LFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
REVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEM
KNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQ
SIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQ
VFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNL
GYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFL
QSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQ
LAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQ
VLGRVLGKLNQVPDVIDARRLHGG

Specific function: In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. This enzyme catalyzes the formation of pppGpp which i

COG id: COG0317

COG function: function code TK; Guanosine polyphosphate pyrophosphohydrolases/synthetases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

Organism=Escherichia coli, GI1789147, Length=744, Percent_Identity=95.9677419354839, Blast_Score=1470, Evalue=0.0,
Organism=Escherichia coli, GI1790082, Length=680, Percent_Identity=31.9117647058824, Blast_Score=382, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR012675
- InterPro:   IPR007685
- InterPro:   IPR004811
- InterPro:   IPR004095
- InterPro:   IPR012676 [H]

Pfam domain/function: PF01842 ACT; PF04607 RelA_SpoT; PF02824 TGS [H]

EC number: =2.7.6.5 [H]

Molecular weight: Translated: 84115; Mature: 84115

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGV
CCEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCH
EMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLN
HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEM
HHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHY
HCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEG
HHCCHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHHCCHHHCCEEEEECCCCC
AASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCEEECCC
GSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNL
CCCCCHHHHHHHHHHCCEEECCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCC
GYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELE
CEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHH
ELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVE
HHHHHHCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEHH
GVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGES
HHHHHHHHHHHHCCCCCCCHHEEEEECCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHCCC
YSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQ
CCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEEEEEHHHH
VLGRVLGKLNQVPDVIDARRLHGG
HHHHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGV
CCEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCH
EMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLN
HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEM
HHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHY
HCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEG
HHCCHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHHCCHHHCCEEEEECCCCC
AASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCEEECCC
GSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNL
CCCCCHHHHHHHHHHCCEEECCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCC
GYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELE
CEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHH
ELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVE
HHHHHHCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEHH
GVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGES
HHHHHHHHHHHHCCCCCCCHHEEEEECCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHCCC
YSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQ
CCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEEEEEHHHH
VLGRVLGKLNQVPDVIDARRLHGG
HHHHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]