| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is invG
Identifier: 16766204
GI number: 16766204
Start: 3041597
End: 3043285
Strand: Reverse
Name: invG
Synonym: STM2898
Alternate gene names: 16766204
Gene position: 3043285-3041597 (Counterclockwise)
Preceding gene: 16766205
Following gene: 16766203
Centisome position: 62.65
GC content: 46.42
Gene sequence:
>1689_bases ATGAAGACACATATTCTTTTGGCCAGAGTGCTGGCATGTGCCGCGCTTGTTCTGGTTACACCTGGTTATTCTAGTGAAAA AATACCTGTAACGGGAAGTGGGTTTGTTGCGAAAGACGATAGCCTGCGGACATTTTTCGATGCCATGGCGCTACAGCTAA AGGAGCCTGTCATTGTTAGCAAAATGGCGGCACGAAAAAAAATTACGGGCAACTTTGAGTTTCACGATCCTAACGCATTA CTGGAGAAGCTTTCCCTACAACTGGGGCTGATTTGGTATTTCGATGGGCAGGCTATCTATATTTATGACGCCAGTGAAAT GCGCAATGCCGTGGTTTCTTTACGCAACGTCTCACTCAATGAGTTCAACAATTTTCTAAAACGCTCAGGTTTATATAACA AAAATTACCCGCTACGTGGCGATAACCGTAAAGGAACATTCTATGTTTCAGGGCCACCCGTCTATGTTGATATGGTGGTC AACGCCGCCACCATGATGGACAAGCAAAACGATGGTATTGAGCTGGGACGCCAGAAAATAGGGGTGATGCGTCTGAACAA TACCTTCGTGGGCGATCGTACCTATAATCTGCGCGATCAGAAAATGGTTATTCCCGGTATTGCTACGGCCATTGAAAGGT TATTGCAGGGAGAAGAGCAACCCTTAGGTAATATTGTCAGTAGCGAACCCCCGGCGATGCCAGCGTTTTCAGCGAATGGA GAAAAAGGTAAAGCAGCAAATTATGCCGGTGGCATGAGTCTGCAGGAAGCTTTAAAGCAAAATGCCGCGGCGGGCAATAT TAAAATCGTGGCCTATCCGGATACCAACAGTTTGTTAGTAAAGGGAACGGCTGAGCAGGTGCATTTTATCGAAATGCTGG TTAAAGCGCTGGATGTCGCCAAACGTCACGTAGAATTATCCCTGTGGATTGTCGATCTTAATAAAAGCGATCTGGAGCGT TTGGGCACTTCATGGAGCGGCAGCATAACTATTGGGGACAAACTTGGCGTGTCATTAAACCAGTCTTCAATAAGTACCCT CGATGGCAGTCGATTCATCGCCGCGGTCAATGCGTTAGAAGAGAAGAAACAGGCGACGGTGGTTTCGCGCCCGGTATTAC TGACTCAGGAAAATGTTCCCGCTATTTTTGATAACAACAGAACGTTTTACACCAAGCTGATTGGGGAACGTAATGTGGCG CTTGAGCATGTAACATACGGAACAATGATCCGAGTGCTGCCCCGTTTTTCCGCAGATGGTCAGATAGAAATGTCGCTGGA CATTGAAGATGGCAACGATAAGACGCCGCAATCTGATACTACCACCTCCGTAGATGCGTTACCCGAAGTCGGGCGAACGT TAATTAGCACTATTGCGAGAGTGCCGCACGGAAAAAGTTTGCTGGTCGGGGGTTATACACGGGATGCAAATACCGATACT GTCCAAAGTATTCCGTTTTTAGGCAAATTACCGCTTATTGGTAGCCTGTTCCGTTATTCCAGTAAGAATAAAAGTAATGT TGTTCGTGTGTTCATGATTGAACCAAAAGAAATTGTCGACCCGTTAACGCCGGATGCCAGCGAATCGGTAAACAATATTC TGAAGCAAAGCGGTGCCTGGAGTGGGGACGATAAGTTACAGAAATGGGTTCGTGTTTATCTGGATAGAGGTCAGGAGGCA ATTAAATGA
Upstream 100 bases:
>100_bases ATCATGGTTACTCATCGCCTTCACATTTTTCTAGTGAGATCAAAGAGCTGATCGGCGTTTCGCCGCGGAAATTATCAAAT ATTATTCAATTGGCAGACAA
Downstream 100 bases:
>100_bases TTCCTGGCTCAACCTCCGGTATTTCATTTTCCAGAATATTGTCCCGGCAGACATCTCATCAGGATGCGACCCAGCATACT GATGCGCAACAGGCGGAAAT
Product: outer membrane secretin precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MKTHILLARVLACAALVLVTPGYSSEKIPVTGSGFVAKDDSLRTFFDAMALQLKEPVIVSKMAARKKITGNFEFHDPNAL LEKLSLQLGLIWYFDGQAIYIYDASEMRNAVVSLRNVSLNEFNNFLKRSGLYNKNYPLRGDNRKGTFYVSGPPVYVDMVV NAATMMDKQNDGIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQGEEQPLGNIVSSEPPAMPAFSANG EKGKAANYAGGMSLQEALKQNAAAGNIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLER LGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVA LEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDT VQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRGQEA IK
Sequences:
>Translated_562_residues MKTHILLARVLACAALVLVTPGYSSEKIPVTGSGFVAKDDSLRTFFDAMALQLKEPVIVSKMAARKKITGNFEFHDPNAL LEKLSLQLGLIWYFDGQAIYIYDASEMRNAVVSLRNVSLNEFNNFLKRSGLYNKNYPLRGDNRKGTFYVSGPPVYVDMVV NAATMMDKQNDGIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQGEEQPLGNIVSSEPPAMPAFSANG EKGKAANYAGGMSLQEALKQNAAAGNIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLER LGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVA LEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDT VQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRGQEA IK >Mature_562_residues MKTHILLARVLACAALVLVTPGYSSEKIPVTGSGFVAKDDSLRTFFDAMALQLKEPVIVSKMAARKKITGNFEFHDPNAL LEKLSLQLGLIWYFDGQAIYIYDASEMRNAVVSLRNVSLNEFNNFLKRSGLYNKNYPLRGDNRKGTFYVSGPPVYVDMVV NAATMMDKQNDGIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQGEEQPLGNIVSSEPPAMPAFSANG EKGKAANYAGGMSLQEALKQNAAAGNIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLER LGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVA LEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDT VQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRGQEA IK
Specific function: Involved in the invasion of the cells of the intestinal epithelium. Could be necessary for the export of invasion related determinants
COG id: COG1450
COG function: function code NU; Type II secretory pathway, component PulD
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP D family
Homologues:
Organism=Escherichia coli, GI1789793, Length=261, Percent_Identity=26.4367816091954, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): INVG_SALTY (P35672)
Other databases:
- EMBL: X75302 - EMBL: U08280 - EMBL: AE006468 - PIR: S54420 - RefSeq: NP_461819.1 - DIP: DIP-48517N - PRIDE: P35672 - GeneID: 1254421 - GenomeReviews: AE006468_GR - KEGG: stm:STM2898 - NMPDR: fig|99287.1.peg.2795 - HOGENOM: HBG640696 - OMA: VFLIQPR - ProtClustDB: PRK15339 - BioCyc: STYP99287:STM2898-MONOMER - GO: GO:0009405 - InterPro: IPR005644 - InterPro: IPR004846 - InterPro: IPR004845 - InterPro: IPR003522 - PRINTS: PR01337 - TIGRFAMs: TIGR02516
Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N
EC number: NA
Molecular weight: Translated: 61767; Mature: 61767
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00875 T2SP_D
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTHILLARVLACAALVLVTPGYSSEKIPVTGSGFVAKDDSLRTFFDAMALQLKEPVIVS CCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEECCCHHHHHHHHHHHHHCCCHHHH KMAARKKITGNFEFHDPNALLEKLSLQLGLIWYFDGQAIYIYDASEMRNAVVSLRNVSLN HHHHHHHCCCCEEECCHHHHHHHHHHEEEEEEEECCEEEEEEEHHHHHHHHHHHHCCCHH EFNNFLKRSGLYNKNYPLRGDNRKGTFYVSGPPVYVDMVVNAATMMDKQNDGIELGRQKI HHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHCCCCCCHHHHHHHE GVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQGEEQPLGNIVSSEPPAMPAFSANG EEEEECCEEECCEEECCCCCEEECCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCC EKGKAANYAGGMSLQEALKQNAAAGNIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVA CCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHH KRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALE HHEEEEEEEEEECCHHHHHHCCCCCCCCEEECCCCCCEECCCHHHHCCCCHHHHHHHHHH EKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADG HHHHHHHHCCCEEEECCCCCEEEECCCEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCC QIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDT EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCH VQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAW HHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCCCCHHHHHHHHHHHCCCC SGDDKLQKWVRVYLDRGQEAIK CCHHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure MKTHILLARVLACAALVLVTPGYSSEKIPVTGSGFVAKDDSLRTFFDAMALQLKEPVIVS CCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEECCCHHHHHHHHHHHHHCCCHHHH KMAARKKITGNFEFHDPNALLEKLSLQLGLIWYFDGQAIYIYDASEMRNAVVSLRNVSLN HHHHHHHCCCCEEECCHHHHHHHHHHEEEEEEEECCEEEEEEEHHHHHHHHHHHHCCCHH EFNNFLKRSGLYNKNYPLRGDNRKGTFYVSGPPVYVDMVVNAATMMDKQNDGIELGRQKI HHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHCCCCCCHHHHHHHE GVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQGEEQPLGNIVSSEPPAMPAFSANG EEEEECCEEECCEEECCCCCEEECCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCC EKGKAANYAGGMSLQEALKQNAAAGNIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVA CCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHH KRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALE HHEEEEEEEEEECCHHHHHHCCCCCCCCEEECCCCCCEECCCHHHHCCCCHHHHHHHHHH EKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADG HHHHHHHHCCCEEEECCCCCEEEECCCEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCC QIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDT EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCH VQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAW HHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCCCCHHHHHHHHHHHCCCC SGDDKLQKWVRVYLDRGQEAIK CCHHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7868245; 7997169; 11677609