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The map label for this gene is 16766127

Identifier: 16766127

GI number: 16766127

Start: 2964554

End: 2965924

Strand: Reverse

Name: 16766127

Synonym: STM2816

Alternate gene names: NA

Gene position: 2965924-2964554 (Counterclockwise)

Preceding gene: 16766128

Following gene: 16766114

Centisome position: 61.06

GC content: 47.48

Gene sequence:

>1371_bases
ATGAAGGCTAAATATTTAGCGCTGATGATCGGTGCTTGCTTTTCTCATAACCTTTGGGCAGCGAATAATATCACTATTGA
GCAGCGTCTGGCTGAACTGGAGCAACGTGTTGTTAATGCTGAAAAACGGGCATCCGATGCCGAGGCGCAAATTCGCTCGT
TGAAACAGCAGCAGGTCGCCGCTACGCCGACGGTGAATGTCCAGTCCGCCGAGCCCATTGCAGCAGATAAAACGCCGCCG
AAGCTGACTTTATCCGGATTCAGCGATATTAAGTTCTATGGCGATGTCGAATTTAATATGGATGCGGCAAGCCGTTCCGG
TAGTCTGACATCGACGAGAACGTCAGCGAATAAAGATTGGGCACCGGGAACCAATGAACGCTGGGATATTAACGGACGCC
TGTTGCTGGGCTTTGATGGCTACCAGCGGCTGGACAACGGTAATTTTGCCGGATTCTCTGTACAGCCTCTGGCGGACCTG
ACCGGAAAAATGAACCTTGATGATGCCGTTTTCTTCTTTGGTCGTGAGAATGACTGGAAAATTAAGGTTGGTCGTTTTGA
AGCCTACGATATGTTCCCGCTGAATCAGGATACGTTTATTGAATATTCGGGGAATACAGCGAACGATCTTTACAGTGACG
GTTACGGCTATATCTATATGATGAAAGAAGGACGGGGACGTAGCGACAGCGGGGGTAACTTCCTGCTGAGTAAAACCATC
GACAACTGGTATTTCGAAGTTAACACATTGCTGGAAAATGGCAGTACGTTATATACCGAGAAGCAGTACCACGGAATGGA
TTTAAGCAACGATAAAAACGTGGCTTACGTCCGTCCGGTTATCGCCTGGCAAAACGGGCGTTTTTCAACGGCGATAGCGA
TGGAAAGTAACGTCGTTAACAACGCCTATGGCTATTATGAGAATGGGAAGTGGATCGATCAGTCAGATCGTACGGGCTAT
GGTTTTACCATGACCTGGAATGGTCAAAAAACTGACCCGGAAGATGGCGCAGTGATTAACCTGAATACCGCCTATATGGA
CGCGACCGATGAGACAGATTTTACCGCCGGGGTGAATGCGTTGTGGCATCGATTTGAACTGGGTTATATCTATGCGCATA
ACAAAATCGAAGCCTTTAATGCTACCAATATCGATGCCGTTTGTGAGGACGATTGCTGGGTCACCGATCCCGGCAATTAT
GACATTCACACTATTCATGCCTCATATTTATTCCCCAACGTGATGGATATGAAAAACTTTAACATCTACCTCGGTGCCTA
TGCTTCATGGGTAGAGGCCAATCCGAATAATGGCGATAACAGTGAAGATGCGCGTTACGGCGGGCGTCTGAGATTCAAAT
ATTTCTTCTGA

Upstream 100 bases:

>100_bases
TGCGCCAGATATCCAGGTAATAACAAGACTCTACTAATAGCCGGTCGATGGGGTTTTTAGCAAATCTTATCTGGTATACA
TCAAACTTAAGGGATAAAAA

Downstream 100 bases:

>100_bases
TTGTTGGTCTACTAAAAAAGGGATCCGCAGATCCCTTTTATCAGATAGTTAGTGCGCGCCGCCACCGCCGCCGCCCGCAC
CGAAGGGCGGTTTGGCGAAC

Product: glycoporin

Products: NA

Alternate protein names: Glycoporin RafY; Glycoporin RfaY

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MKAKYLALMIGACFSHNLWAANNITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVAATPTVNVQSAEPIAADKTPP
KLTLSGFSDIKFYGDVEFNMDAASRSGSLTSTRTSANKDWAPGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADL
TGKMNLDDAVFFFGRENDWKIKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
DNWYFEVNTLLENGSTLYTEKQYHGMDLSNDKNVAYVRPVIAWQNGRFSTAIAMESNVVNNAYGYYENGKWIDQSDRTGY
GFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNALWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWVTDPGNY
DIHTIHASYLFPNVMDMKNFNIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF

Sequences:

>Translated_456_residues
MKAKYLALMIGACFSHNLWAANNITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVAATPTVNVQSAEPIAADKTPP
KLTLSGFSDIKFYGDVEFNMDAASRSGSLTSTRTSANKDWAPGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADL
TGKMNLDDAVFFFGRENDWKIKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
DNWYFEVNTLLENGSTLYTEKQYHGMDLSNDKNVAYVRPVIAWQNGRFSTAIAMESNVVNNAYGYYENGKWIDQSDRTGY
GFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNALWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWVTDPGNY
DIHTIHASYLFPNVMDMKNFNIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF
>Mature_456_residues
MKAKYLALMIGACFSHNLWAANNITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVAATPTVNVQSAEPIAADKTPP
KLTLSGFSDIKFYGDVEFNMDAASRSGSLTSTRTSANKDWAPGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADL
TGKMNLDDAVFFFGRENDWKIKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
DNWYFEVNTLLENGSTLYTEKQYHGMDLSNDKNVAYVRPVIAWQNGRFSTAIAMESNVVNNAYGYYENGKWIDQSDRTGY
GFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNALWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWVTDPGNY
DIHTIHASYLFPNVMDMKNFNIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51478; Mature: 51478

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKYLALMIGACFSHNLWAANNITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVA
CCCCEEEEEEHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
ATPTVNVQSAEPIAADKTPPKLTLSGFSDIKFYGDVEFNMDAASRSGSLTSTRTSANKDW
CCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCEECCCCCCCCC
APGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADLTGKMNLDDAVFFFGRENDWK
CCCCCCEEECCCEEEEEECCHHHCCCCCCCCEEECCHHHCCCCCCCCCEEEEEECCCCEE
IKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
EEEEEEEEEEECCCCCCCEEEECCCCCCHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEC
DNWYFEVNTLLENGSTLYTEKQYHGMDLSNDKNVAYVRPVIAWQNGRFSTAIAMESNVVN
CCEEEEEEEHCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCC
NAYGYYENGKWIDQSDRTGYGFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNA
CCCCEECCCCEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHH
LWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWVTDPGNYDIHTIHASYLFPNVMDMKNF
HHHEEEEEEEEECCEEEEECCCCCCEEECCCCEEECCCCCEEEEEEEHHHCCCCCCCCCC
NIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF
EEEEEEEEEEEECCCCCCCCCCCHHCCCEEEEEEEC
>Mature Secondary Structure
MKAKYLALMIGACFSHNLWAANNITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVA
CCCCEEEEEEHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
ATPTVNVQSAEPIAADKTPPKLTLSGFSDIKFYGDVEFNMDAASRSGSLTSTRTSANKDW
CCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCEECCCCCCCCC
APGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADLTGKMNLDDAVFFFGRENDWK
CCCCCCEEECCCEEEEEECCHHHCCCCCCCCEEECCHHHCCCCCCCCCEEEEEECCCCEE
IKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
EEEEEEEEEEECCCCCCCEEEECCCCCCHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEC
DNWYFEVNTLLENGSTLYTEKQYHGMDLSNDKNVAYVRPVIAWQNGRFSTAIAMESNVVN
CCEEEEEEEHCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCC
NAYGYYENGKWIDQSDRTGYGFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNA
CCCCEECCCCEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHH
LWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWVTDPGNYDIHTIHASYLFPNVMDMKNF
HHHEEEEEEEEECCEEEEECCCCCCEEECCCCEEECCCCCEEEEEEEHHHCCCCCCCCCC
NIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF
EEEEEEEEEEEECCCCCCCCCCCHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA