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The map label for this gene is yqaE [H]

Identifier: 16766107

GI number: 16766107

Start: 2945700

End: 2945858

Strand: Reverse

Name: yqaE [H]

Synonym: STM2796

Alternate gene names: 16766107

Gene position: 2945858-2945700 (Counterclockwise)

Preceding gene: 16766110

Following gene: 16766106

Centisome position: 60.65

GC content: 42.77

Gene sequence:

>159_bases
ATGGGTTTCTGGAGAATTGTATTTACGATTATTTTGCCTCCGCTCGGCGTACTTTTAGGAAAAGGGTTCGGTTGGGCATT
TATCCTTAATATCCTGCTGACATTACTCGGATATATTCCGGGGCTTATCCACGCATTTTGGGTTCAGATGCGTCATTAA

Upstream 100 bases:

>100_bases
AAAAGCGCGGCGCGCGACTGGCAGGCTCAGGTAAACTGACTATGCTTAGAGATAAAATCTCTTTTTAAACAATGACTAAT
TTTGCTTGTATGGAGTGTAT

Downstream 100 bases:

>100_bases
TTACCGGCCACCGGCGGCGCATAAGCGCCGCTTATCAGGATAACCTCATTCCCTCTGCTACACTTTTCTTTGTGTGTATT
TTTGACAAGCGAGGTGAATA

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 51

Protein sequence:

>52_residues
MGFWRIVFTIILPPLGVLLGKGFGWAFILNILLTLLGYIPGLIHAFWVQMRH

Sequences:

>Translated_52_residues
MGFWRIVFTIILPPLGVLLGKGFGWAFILNILLTLLGYIPGLIHAFWVQMRH
>Mature_51_residues
GFWRIVFTIILPPLGVLLGKGFGWAFILNILLTLLGYIPGLIHAFWVQMRH

Specific function: Unknown

COG id: COG0401

COG function: function code S; Uncharacterized homolog of Blt101

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0057 (PMP3) family [H]

Homologues:

Organism=Escherichia coli, GI1789020, Length=52, Percent_Identity=92.3076923076923, Blast_Score=94, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000612 [H]

Pfam domain/function: PF01679 UPF0057 [H]

EC number: NA

Molecular weight: Translated: 5951; Mature: 5820

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: PS01309 UPF0057

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFWRIVFTIILPPLGVLLGKGFGWAFILNILLTLLGYIPGLIHAFWVQMRH
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GFWRIVFTIILPPLGVLLGKGFGWAFILNILLTLLGYIPGLIHAFWVQMRH
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]