Click here to switch to the map view.

The map label for this gene is lcrS [H]

Identifier: 16766077

GI number: 16766077

Start: 2907066

End: 2907332

Strand: Reverse

Name: lcrS [H]

Synonym: STM2765

Alternate gene names: 16766077

Gene position: 2907332-2907066 (Counterclockwise)

Preceding gene: 16766078

Following gene: 16766074

Centisome position: 59.85

GC content: 47.19

Gene sequence:

>267_bases
ATGCGTAAAGCCCGTTTTACCGAGCATCAGATCATTGCCGTAATTAAATCGGTTGAAGCCGGACGAACCGTTAAAGATGC
CTGCCGGGAGGCCGGTATATCTGAAGCCACCTACTATAACTGGAAGTCCAGATACGGCGGCATGGAACCTTCTGATATTA
AAAAGATAAAAGATCTTGAGGACGAGAACCGACGCCTCAAACAGATGTTTGCCGACCTGAGCCTTGAGAACCGGGCGCTG
AAAGACGTTATCGAAAAAAAGCTTTAA

Upstream 100 bases:

>100_bases
AGAGTCTTTTCCACGCCCCATTGTAAGTATCCCGCATAATCGTGCCATTCACATTTAGAGATCCTCCGGCATAATCAATC
TGCCAACAAAGGAGATCGCT

Downstream 100 bases:

>100_bases
AACCAGCCTTTAAGCGTGAGCTGGTCACTCATCTGATAACGGCATTCGGACTCAGTATCCGTCAGGCCTGCCGGAGCCTG
AACCTGAGCAGAACGGTTTA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MRKARFTEHQIIAVIKSVEAGRTVKDACREAGISEATYYNWKSRYGGMEPSDIKKIKDLEDENRRLKQMFADLSLENRAL
KDVIEKKL

Sequences:

>Translated_88_residues
MRKARFTEHQIIAVIKSVEAGRTVKDACREAGISEATYYNWKSRYGGMEPSDIKKIKDLEDENRRLKQMFADLSLENRAL
KDVIEKKL
>Mature_88_residues
MRKARFTEHQIIAVIKSVEAGRTVKDACREAGISEATYYNWKSRYGGMEPSDIKKIKDLEDENRRLKQMFADLSLENRAL
KDVIEKKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10233; Mature: 10233

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKARFTEHQIIAVIKSVEAGRTVKDACREAGISEATYYNWKSRYGGMEPSDIKKIKDLE
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHCCHHHHCCCCCHHHHHHHHCCC
DENRRLKQMFADLSLENRALKDVIEKKL
HHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRKARFTEHQIIAVIKSVEAGRTVKDACREAGISEATYYNWKSRYGGMEPSDIKKIKDLE
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHCCHHHHCCCCCHHHHHHHHCCC
DENRRLKQMFADLSLENRALKDVIEKKL
HHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]