| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16766038
Identifier: 16766038
GI number: 16766038
Start: 2868892
End: 2869623
Strand: Reverse
Name: 16766038
Synonym: STM2726
Alternate gene names: NA
Gene position: 2869623-2868892 (Counterclockwise)
Preceding gene: 16766039
Following gene: 16766037
Centisome position: 59.08
GC content: 39.89
Gene sequence:
>732_bases ATGTCAATCAGATATCGCCTTGTTTTTCGTCAAGAAAAGAATAATAGGCTAAAAATGAAAATTAATAATGTAGCGTTAAC AATATCTCTTGCTGTAATCCTAACTGGTTGCGTGCCACATGCTTCTAACCGAAATATCACTGCTATTGAAGTGGTGAAGC CTGCTATTGGGCAAAGTGCTACCGCCTACATGGGCGATCCCATTATCACATCTGCTACTGGATTTAAAACGGACGTACTA GAACTTGGTGCGGCTAATGGTGCATTGTCTTCTATCGCTGCTGGTACATATTGCAGTGAGGGGAATGGAATTTACCGCAA TTATCATAACCCTCAAGCTGTTGCGTTAAAAAATCTCTATGGGCAAATCGGTAACTATGTTGATTATGTTAGTTACGATG CTGCAAAAAATGAGATATCACCGCCAAATGGCACTTCTTATTCTGCATCAGAAATTTCTATCAAACGTGTTCCTGATGGA CTGTGTCGAGTGAGTAACTCATTGGTTAAGACTATCGAATACAATGGAAATGCAGGCGGTGTAATGAAGTTCACCTATCG TGAATTTGCAAACGATATGGCTCGTGCAGCATTTACAACAGATTTTTCTGTAGATTCTAAGGGAAGTGATGTTATCGCTT ACAAAGGTGCCAAGTTCAAAGTGAACAAGGCTGATAACTCGTCTATTTCTTATACAATTATTTCTGGCTTTGACAAGGCT GTCACGTTCTAG
Upstream 100 bases:
>100_bases TTATGCAGAAGGTGTGGGAAGACGACAGCTGGCTACATTGATTTTGTCAATAGACGCTTGTTTTTACTAATCAAAAAGGG TTACATATGAGTGAGAGGCG
Downstream 100 bases:
>100_bases GTTTCACGCTTACGGACTATGTTACGATTTTGCACATTCTGCATAAACGCGCATGTCTATGCTGCATGAGATCGCATGAT CGTTTGAGGATCTTTTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSIRYRLVFRQEKNNRLKMKINNVALTISLAVILTGCVPHASNRNITAIEVVKPAIGQSATAYMGDPIITSATGFKTDVL ELGAANGALSSIAAGTYCSEGNGIYRNYHNPQAVALKNLYGQIGNYVDYVSYDAAKNEISPPNGTSYSASEISIKRVPDG LCRVSNSLVKTIEYNGNAGGVMKFTYREFANDMARAAFTTDFSVDSKGSDVIAYKGAKFKVNKADNSSISYTIISGFDKA VTF
Sequences:
>Translated_243_residues MSIRYRLVFRQEKNNRLKMKINNVALTISLAVILTGCVPHASNRNITAIEVVKPAIGQSATAYMGDPIITSATGFKTDVL ELGAANGALSSIAAGTYCSEGNGIYRNYHNPQAVALKNLYGQIGNYVDYVSYDAAKNEISPPNGTSYSASEISIKRVPDG LCRVSNSLVKTIEYNGNAGGVMKFTYREFANDMARAAFTTDFSVDSKGSDVIAYKGAKFKVNKADNSSISYTIISGFDKA VTF >Mature_242_residues SIRYRLVFRQEKNNRLKMKINNVALTISLAVILTGCVPHASNRNITAIEVVKPAIGQSATAYMGDPIITSATGFKTDVLE LGAANGALSSIAAGTYCSEGNGIYRNYHNPQAVALKNLYGQIGNYVDYVSYDAAKNEISPPNGTSYSASEISIKRVPDGL CRVSNSLVKTIEYNGNAGGVMKFTYREFANDMARAAFTTDFSVDSKGSDVIAYKGAKFKVNKADNSSISYTIISGFDKAV TF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26181; Mature: 26050
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRYRLVFRQEKNNRLKMKINNVALTISLAVILTGCVPHASNRNITAIEVVKPAIGQSA CCEEEEEEEEECCCCEEEEEECCEEEEEEEEHHHHHCCCCCCCCCEEEEEEECCCCCCCC TAYMGDPIITSATGFKTDVLELGAANGALSSIAAGTYCSEGNGIYRNYHNPQAVALKNLY EEECCCCEEECCCCCCHHHHHHCCCCCHHHHHHCCCEECCCCCEEECCCCCHHHHHHHHH GQIGNYVDYVSYDAAKNEISPPNGTSYSASEISIKRVPDGLCRVSNSLVKTIEYNGNAGG HHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEEEEEECCCCCC VMKFTYREFANDMARAAFTTDFSVDSKGSDVIAYKGAKFKVNKADNSSISYTIISGFDKA EEEEHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCEEEEECCCCCEEEEEEECCCCHH VTF CCC >Mature Secondary Structure SIRYRLVFRQEKNNRLKMKINNVALTISLAVILTGCVPHASNRNITAIEVVKPAIGQSA CEEEEEEEEECCCCEEEEEECCEEEEEEEEHHHHHCCCCCCCCCEEEEEEECCCCCCCC TAYMGDPIITSATGFKTDVLELGAANGALSSIAAGTYCSEGNGIYRNYHNPQAVALKNLY EEECCCCEEECCCCCCHHHHHHCCCCCHHHHHHCCCEECCCCCEEECCCCCHHHHHHHHH GQIGNYVDYVSYDAAKNEISPPNGTSYSASEISIKRVPDGLCRVSNSLVKTIEYNGNAGG HHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEEEEEECCCCCC VMKFTYREFANDMARAAFTTDFSVDSKGSDVIAYKGAKFKVNKADNSSISYTIISGFDKA EEEEHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCEEEEECCCCCEEEEEEECCCCHH VTF CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA