| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16766025
Identifier: 16766025
GI number: 16766025
Start: 2858501
End: 2858932
Strand: Reverse
Name: 16766025
Synonym: STM2712
Alternate gene names: NA
Gene position: 2858932-2858501 (Counterclockwise)
Preceding gene: 16766026
Following gene: 16766024
Centisome position: 58.86
GC content: 55.09
Gene sequence:
>432_bases GTGAACAAACCGCAGTCCTTACGCAGCGCCCTGAATAAAGCGGTTGCCTATGTCCGGGACAACCCGGACAAGCTGCACCT TTTCGTTGATAACGGCTCACTGGTGGCAACAGGAGCCAGTTCTATGTCATGGGAATACCGCTACACCCTGAACGTGGTGA TCGAGGATTTCAGCGGCGACCAGAATCTGCTGATGGCTCCAGTCCTGCTGTGGCTCAGTACCAGTCAGCCGGACGCCATC AACAACCCGGATCTGCGCGAAAAACTGTTCACCTTTGAAGTGGATATTCTGCGAAACGATGTGTGCGATATCAGCATGAA CCTGCAACTGACTGAGCGTGTGCTGGTCAGCACTGACGGCAGCGTATCGAGCGTTGAAGCGGTGCCGGAGCCGGACGAAC CCGAAGAAATGTGGACGGTGAAACGTGGATGA
Upstream 100 bases:
>100_bases AGTAACGGCGATCTGAACGCGGTGCTGGATGAAACCGAGGCCGCCTGGGCGGTCTGTGCTGACAAAGTGGACACGATTAT TGCGTGTCAGGAGCGAGACA
Downstream 100 bases:
>100_bases GCTGCAGAAGGTGGATGACTGGCTGACGGCGCTGCTGGCGAATCTGGAGCCTGCCGCGCGCAGCCGTATGATGCGGCAAC TGGCGCAACAGCTGCGCCGG
Product: phage tail-like protein
Products: NA
Alternate protein names: Tail Completion Protein R; P2 Phage Tail Completion Protein R; Phage Tail Completion Protein R; Phage Tail Protein; Bacteriophage P2 Tail Completion Protein GPR; Phage-Related Tail Completion Protein; Bacteriophage Tail Completion Protein R; Tail Completion Protein; Bacteriophage Tail Completion Protein GpR-Like Protein; Phage-Related Tail Protein; P2 Phage Tail Completion Protein R GpR; Prophage Tail Completion Protein; Phage Tail Completion Protein GpR; Phage Tail Completion R Family Protein; Bacteriophage P2 Tail Completion Protein GpR; Tail Completion-Like Protein; Bacteriophage Tail Completion-Like Protein
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MNKPQSLRSALNKAVAYVRDNPDKLHLFVDNGSLVATGASSMSWEYRYTLNVVIEDFSGDQNLLMAPVLLWLSTSQPDAI NNPDLREKLFTFEVDILRNDVCDISMNLQLTERVLVSTDGSVSSVEAVPEPDEPEEMWTVKRG
Sequences:
>Translated_143_residues MNKPQSLRSALNKAVAYVRDNPDKLHLFVDNGSLVATGASSMSWEYRYTLNVVIEDFSGDQNLLMAPVLLWLSTSQPDAI NNPDLREKLFTFEVDILRNDVCDISMNLQLTERVLVSTDGSVSSVEAVPEPDEPEEMWTVKRG >Mature_143_residues MNKPQSLRSALNKAVAYVRDNPDKLHLFVDNGSLVATGASSMSWEYRYTLNVVIEDFSGDQNLLMAPVLLWLSTSQPDAI NNPDLREKLFTFEVDILRNDVCDISMNLQLTERVLVSTDGSVSSVEAVPEPDEPEEMWTVKRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16032; Mature: 16032
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPQSLRSALNKAVAYVRDNPDKLHLFVDNGSLVATGASSMSWEYRYTLNVVIEDFSGD CCCHHHHHHHHHHHHEEEECCCCEEEEEEECCCEEEECCCCCCEEEEEEEEEEEEECCCC QNLLMAPVLLWLSTSQPDAINNPDLREKLFTFEVDILRNDVCDISMNLQLTERVLVSTDG CCHHHHHHHEEECCCCCCCCCCCHHHHHHHEEEEEEHHCCCEEEEECEEEEEEEEEECCC SVSSVEAVPEPDEPEEMWTVKRG CCCEEECCCCCCCCHHEEEECCC >Mature Secondary Structure MNKPQSLRSALNKAVAYVRDNPDKLHLFVDNGSLVATGASSMSWEYRYTLNVVIEDFSGD CCCHHHHHHHHHHHHEEEECCCCEEEEEEECCCEEEECCCCCCEEEEEEEEEEEEECCCC QNLLMAPVLLWLSTSQPDAINNPDLREKLFTFEVDILRNDVCDISMNLQLTERVLVSTDG CCHHHHHHHEEECCCCCCCCCCCHHHHHHHEEEEEEHHCCCEEEEECEEEEEEEEEECCC SVSSVEAVPEPDEPEEMWTVKRG CCCEEECCCCCCCCHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA