| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16766020
Identifier: 16766020
GI number: 16766020
Start: 2855566
End: 2856171
Strand: Reverse
Name: 16766020
Synonym: STM2707
Alternate gene names: NA
Gene position: 2856171-2855566 (Counterclockwise)
Preceding gene: 16766021
Following gene: 16766019
Centisome position: 58.8
GC content: 56.11
Gene sequence:
>606_bases ATGAATAGTCTGTTGCCGCCGGGTTCGTCGCCGCTTGAGCGCCGACTGGCGCAGACCTGCAGCGGGATTTCCGATCTGCA GGTATCGCTGCGTGATTTGTGGAACCCGGCAACCTGCCCGATCAGATTCCTGCCTTATCTGGCCTGGGCGTTTTCTGTTG ACCGCTGGGATGAGAGCTGGACAGAAAGCGTCAAGCGCCGCGTTGTGCAGGACGCTTTTTATATCCATCAGCACAAGGGG ACAACCAGCGCCGTGCGGCGCGTGGTAGAGCCGTTCGGCTTCCTGATCCGCATCAATGAGTGGTGGCAGACCGGCGAAAC GCCGGGGACGTTCCGTCTGGATATTGGCGTACAGGATCATGGTATCACCGAAGACACCTATCTGGAGCTTGAGCGCCTGA TAAGCGATGCCAAACCATGCAGCCGCCACATGACAGGTATGTCCATTAATATGCAGACCAGCGGCCCTTACTGGGTTGGT GCAGCCAGCTACCTTGGTGAAGAAATCACGGTGTATCCGTATATCAATGAAACGATTGTTTCCGGCGGCACCGCACATGA AGGCGGGGCAGTCCATGTTATTGACACAATGAGAGTGAATCCATGA
Upstream 100 bases:
>100_bases GTCCAGCGTGTGGAGCTGACGTCCCCTCTGGAGGATGTGGTGCTGGATAAGACACAGGCGGCATCCTGTACCGAATGGAG CGTTACCAACGGGGGCACGG
Downstream 100 bases:
>100_bases GCGCAAAATTTTATACCCTGCTGACGGAGATCGGCGCGGCGAAACTGGCAAGCGCCGCCGCGCTCGGTGTCCCGCTGAAA ATTACCCATATGGCGGTGGG
Product: phage tail-like protein
Products: NA
Alternate protein names: Tail Protein I; Phage Tail Protein; Phage-Related Tail Protein; Bacteriophage P2-Related Tail Formation Protein; Bacteriophage Protein; Pyocin R2_PP Tail Formation Protein GpI; Tail Protein I Prophage; Tail Formation-Like Protein; Phage P2 Baseplate Assembly GpI-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPI; Bacteriophage P2-Related Tail Formation Protein GpI; Prophage Tail Protein; Bacteriophage Tail Formation Protein I; DNA Methylase; Phage-Related Tail Protein I; Phage Tail-Like Protein; Bacteriophage Tail Protein I
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MNSLLPPGSSPLERRLAQTCSGISDLQVSLRDLWNPATCPIRFLPYLAWAFSVDRWDESWTESVKRRVVQDAFYIHQHKG TTSAVRRVVEPFGFLIRINEWWQTGETPGTFRLDIGVQDHGITEDTYLELERLISDAKPCSRHMTGMSINMQTSGPYWVG AASYLGEEITVYPYINETIVSGGTAHEGGAVHVIDTMRVNP
Sequences:
>Translated_201_residues MNSLLPPGSSPLERRLAQTCSGISDLQVSLRDLWNPATCPIRFLPYLAWAFSVDRWDESWTESVKRRVVQDAFYIHQHKG TTSAVRRVVEPFGFLIRINEWWQTGETPGTFRLDIGVQDHGITEDTYLELERLISDAKPCSRHMTGMSINMQTSGPYWVG AASYLGEEITVYPYINETIVSGGTAHEGGAVHVIDTMRVNP >Mature_201_residues MNSLLPPGSSPLERRLAQTCSGISDLQVSLRDLWNPATCPIRFLPYLAWAFSVDRWDESWTESVKRRVVQDAFYIHQHKG TTSAVRRVVEPFGFLIRINEWWQTGETPGTFRLDIGVQDHGITEDTYLELERLISDAKPCSRHMTGMSINMQTSGPYWVG AASYLGEEITVYPYINETIVSGGTAHEGGAVHVIDTMRVNP
Specific function: Unknown
COG id: COG4385
COG function: function code R; Bacteriophage P2-related tail formation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22644; Mature: 22644
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLLPPGSSPLERRLAQTCSGISDLQVSLRDLWNPATCPIRFLPYLAWAFSVDRWDESW CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHH TESVKRRVVQDAFYIHQHKGTTSAVRRVVEPFGFLIRINEWWQTGETPGTFRLDIGVQDH HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEHHHCCCCCCCEEEEEECCCCC GITEDTYLELERLISDAKPCSRHMTGMSINMQTSGPYWVGAASYLGEEITVYPYINETIV CCCHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCEEEEHHHHCCCCEEEEEECCHHHC SGGTAHEGGAVHVIDTMRVNP CCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MNSLLPPGSSPLERRLAQTCSGISDLQVSLRDLWNPATCPIRFLPYLAWAFSVDRWDESW CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHH TESVKRRVVQDAFYIHQHKGTTSAVRRVVEPFGFLIRINEWWQTGETPGTFRLDIGVQDH HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEHHHCCCCCCCEEEEEECCCCC GITEDTYLELERLISDAKPCSRHMTGMSINMQTSGPYWVGAASYLGEEITVYPYINETIV CCCHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCEEEEHHHHCCCCEEEEEECCHHHC SGGTAHEGGAVHVIDTMRVNP CCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA