Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
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Accession | NC_003197 |
Length | 4,857,432 |
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The map label for this gene is ogrK [H]
Identifier: 16766007
GI number: 16766007
Start: 2844427
End: 2844645
Strand: Reverse
Name: ogrK [H]
Synonym: STM2694
Alternate gene names: 16766007
Gene position: 2844645-2844427 (Counterclockwise)
Preceding gene: 16766008
Following gene: 16766002
Centisome position: 58.56
GC content: 44.29
Gene sequence:
>219_bases ATGATGAACTGTCCAGAGTGCGGTCATGCAGCACATACCAGAAGCAGCTTTCAGGTATCAGCTACGACAAAAGAACGTTA CAACCAGTGCCAAAATATAAATTGTGGCTGTACGTTCGTTACTCATGAAACGTTTGTACGGCACATTATAAAACCGAATC TAATTTCTTCTGCGCCACCACATCCGGGAAAAGGTGGTCAAGGCCACATGAGTTTCTGA
Upstream 100 bases:
>100_bases AAGTAAAGATTGATGATCTTGAAATTGAATGATTGGTTCTCAATATTGAATAATGCTGTATCATTATTGCGATTATGGCA AAAGTGGTGGGATAACAGCA
Downstream 100 bases:
>100_bases ACAGAACCCGCTTTAATGGCGGGTTTTTTGTTGCCGCCAGTCCGACACGCTGTCGCCATTTTGCCGCCACTACCAAAGAA AAAGGGGCTACGTTTTCACG
Product: late control-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MMNCPECGHAAHTRSSFQVSATTKERYNQCQNINCGCTFVTHETFVRHIIKPNLISSAPPHPGKGGQGHMSF
Sequences:
>Translated_72_residues MMNCPECGHAAHTRSSFQVSATTKERYNQCQNINCGCTFVTHETFVRHIIKPNLISSAPPHPGKGGQGHMSF >Mature_72_residues MMNCPECGHAAHTRSSFQVSATTKERYNQCQNINCGCTFVTHETFVRHIIKPNLISSAPPHPGKGGQGHMSF
Specific function: Cryptic version of the phage P2 OGR protein which acts as an activator of P2 late transcription [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788398, Length=70, Percent_Identity=51.4285714285714, Blast_Score=81, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007684 [H]
Pfam domain/function: PF04606 Ogr_Delta [H]
EC number: NA
Molecular weight: Translated: 7930; Mature: 7930
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNCPECGHAAHTRSSFQVSATTKERYNQCQNINCGCTFVTHETFVRHIIKPNLISSAPP CCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCCCCCC HPGKGGQGHMSF CCCCCCCCCCCC >Mature Secondary Structure MMNCPECGHAAHTRSSFQVSATTKERYNQCQNINCGCTFVTHETFVRHIIKPNLISSAPP CCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCCCCCC HPGKGGQGHMSF CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1597424; 1597423; 9097040; 9278503 [H]