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The map label for this gene is ybeY [H]

Identifier: 16764045

GI number: 16764045

Start: 732766

End: 733239

Strand: Reverse

Name: ybeY [H]

Synonym: STM0668

Alternate gene names: 16764045

Gene position: 733239-732766 (Counterclockwise)

Preceding gene: 308065969

Following gene: 16764044

Centisome position: 15.1

GC content: 54.22

Gene sequence:

>474_bases
ATGAGCCAGGTGATCCTCGATTTACAGTTGGCCTGTGAAAACCACGCGGGCCTGCCGGATGAAGCTCAGTTTCAACGCTG
GCTGGACGGCGTTATTCCGCAGTTTCAGGAAGAGGCGGAAGTCACAATCCGTCTGGTGGATGAGGCCGAAAGCCACGACC
TTAATTTGACGTACCGCGGGAAAGATAAACCCACTAATGTTCTCTCCTTCCCGTTTGAAGCGCCCGCCGGCATTGAAATG
CCGCTACTGGGCGATCTGATTATTTGCCGTCAGGTCGTGGAGCAGGAAGCGCAAGAACAGAGCAAGCCGCTGGAGGCGCA
CTGGGCGCACATGGTCGTGCACGGTAGCCTGCATTTGCTGGGTTACGATCATATCGACGATGACGAAGCGGAAGAGATGG
AGTCTCTCGAAACGGAGATTATGCTTGCTATGGGCTATGAGGATCCGTACATTGCCGAGAAGATTGCAGAATAG

Upstream 100 bases:

>100_bases
GCATTGTTAACGCCTATGAAGCCTGGGAAGAGGCCGAACAAAAACGCAAAGCGGCGTTGGCGGCAGAGCGTAAGCGTGAA
GCCCAGGAGCAGGAACAGAA

Downstream 100 bases:

>100_bases
TAGCTTGCCGGATGGCGGCGCTTGCGCCTTATCCGGCCTACATTCATGCCTTTTGTAGGCCTGATAAGCGTAGCGCCATC
AGGCAAAACATGCCGTCACA

Product: metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSQVILDLQLACENHAGLPDEAQFQRWLDGVIPQFQEEAEVTIRLVDEAESHDLNLTYRGKDKPTNVLSFPFEAPAGIEM
PLLGDLIICRQVVEQEAQEQSKPLEAHWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPYIAEKIAE

Sequences:

>Translated_157_residues
MSQVILDLQLACENHAGLPDEAQFQRWLDGVIPQFQEEAEVTIRLVDEAESHDLNLTYRGKDKPTNVLSFPFEAPAGIEM
PLLGDLIICRQVVEQEAQEQSKPLEAHWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPYIAEKIAE
>Mature_156_residues
SQVILDLQLACENHAGLPDEAQFQRWLDGVIPQFQEEAEVTIRLVDEAESHDLNLTYRGKDKPTNVLSFPFEAPAGIEMP
LLGDLIICRQVVEQEAQEQSKPLEAHWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPYIAEKIAE

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity [H]

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family [H]

Homologues:

Organism=Escherichia coli, GI1786880, Length=154, Percent_Identity=85.7142857142857, Blast_Score=262, Evalue=8e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036 [H]

Pfam domain/function: PF02130 UPF0054 [H]

EC number: NA

Molecular weight: Translated: 17784; Mature: 17653

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: PS01306 UPF0054

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVILDLQLACENHAGLPDEAQFQRWLDGVIPQFQEEAEVTIRLVDEAESHDLNLTYRG
CCCEEEEHEEHHCCCCCCCCHHHHHHHHHHHCHHHCCCCEEEEEEECCCCCCCEEEEECC
KDKPTNVLSFPFEAPAGIEMPLLGDLIICRQVVEQEAQEQSKPLEAHWAHMVVHGSLHLL
CCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCEEEE
GYDHIDDDEAEEMESLETEIMLAMGYEDPYIAEKIAE
ECCCCCCCHHHHHHHHHHHEEEEECCCCCHHHHHHCC
>Mature Secondary Structure 
SQVILDLQLACENHAGLPDEAQFQRWLDGVIPQFQEEAEVTIRLVDEAESHDLNLTYRG
CCEEEEHEEHHCCCCCCCCHHHHHHHHHHHCHHHCCCCEEEEEEECCCCCCCEEEEECC
KDKPTNVLSFPFEAPAGIEMPLLGDLIICRQVVEQEAQEQSKPLEAHWAHMVVHGSLHLL
CCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCEEEE
GYDHIDDDEAEEMESLETEIMLAMGYEDPYIAEKIAE
ECCCCCCCHHHHHHHHHHHEEEEECCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA