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The map label for this gene is ynfH [C]

Identifier: 16763990

GI number: 16763990

Start: 676537

End: 677304

Strand: Direct

Name: ynfH [C]

Synonym: STM0613

Alternate gene names: 16763990

Gene position: 676537-677304 (Clockwise)

Preceding gene: 16763989

Following gene: 16763992

Centisome position: 13.93

GC content: 55.08

Gene sequence:

>768_bases
ATGGAAAAATATGAACTGCCGCTGGTGTTTTTTACGGTATTAAGCCAGATGTCTGTCGGGATGGCTTTGGTACTGACATG
GCGTACGCTGCGTGGTGAAGTGGAAGGCCAGCGTTTCTATTGGTTGGCCACCGGGCTGGTGCTGGCATTGGCGTCTATTG
CCGCGATTCTGCATCTGGCGCATCCCGATCGCGCTTATGATGCGCTGATTAACCTGCGACATGCCTGGTTAAGTCGGGAA
ATCCTGGGCGCCACGTTGTTTGGCGCAGCGGTCGGCGTAACGTTCCTGGCAAAGGGACATAAAGCGATGGCTCTTATCGC
CTCCGTGTTCGGCGTGTTACTGGTGGCGGTGCAGGGGATGACCTACGCCGCGCCAGCGATGGTGGCTATCGCTAATGGAT
TTACCATGCTGTTATTTTTTATTACGGTATGGGTCATGGGTTGCGCGGCGATTCCGCTGTTAAAACTCAGGCCTGCCGTT
CCTGCGTTACGCCAGGGGATTGTGGTGTGTATCGCGGTACTTATCGCGGCGCCGCTGGTGTGGTTAAGCGGGGGAACGGT
AATGCAGATGACGGCGCGTTCATGGCTGGCTTCACCGTTTTATCTGGCAAGCCTGGTCTGCCTTGCGCTCGCTTTTGTCG
CCAGCCGTCACGGTGATTCGCGCCCGAAACGCCTGTTCGTCTTGTTATTCGTCGGCGTATTTCTGAGTCGGCTGGTCTTT
TTTGGCGACACGGTGAGTACTATTGTGAATATCGGGCATTTGTACTAA

Upstream 100 bases:

>100_bases
ATGCGGTGCAGTATCCGCCAGGGTTCCCGCATATGCCACAGCTTAATCCAGGAACGCGCTTTATTCTGGCGCGCCAGCCT
AAGCAGCCGGAGGACAAGTA

Downstream 100 bases:

>100_bases
CGATGATGCAGTAAAAAGCCCTGCCAGGCGTGACCTGGCAGGGCGTGTAAGTTTTTAGCCACCAGAGTTAACGCACAACC
AATACGGGCAGCGTCGCATG

Product: hydrogenase protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MEKYELPLVFFTVLSQMSVGMALVLTWRTLRGEVEGQRFYWLATGLVLALASIAAILHLAHPDRAYDALINLRHAWLSRE
ILGATLFGAAVGVTFLAKGHKAMALIASVFGVLLVAVQGMTYAAPAMVAIANGFTMLLFFITVWVMGCAAIPLLKLRPAV
PALRQGIVVCIAVLIAAPLVWLSGGTVMQMTARSWLASPFYLASLVCLALAFVASRHGDSRPKRLFVLLFVGVFLSRLVF
FGDTVSTIVNIGHLY

Sequences:

>Translated_255_residues
MEKYELPLVFFTVLSQMSVGMALVLTWRTLRGEVEGQRFYWLATGLVLALASIAAILHLAHPDRAYDALINLRHAWLSRE
ILGATLFGAAVGVTFLAKGHKAMALIASVFGVLLVAVQGMTYAAPAMVAIANGFTMLLFFITVWVMGCAAIPLLKLRPAV
PALRQGIVVCIAVLIAAPLVWLSGGTVMQMTARSWLASPFYLASLVCLALAFVASRHGDSRPKRLFVLLFVGVFLSRLVF
FGDTVSTIVNIGHLY
>Mature_255_residues
MEKYELPLVFFTVLSQMSVGMALVLTWRTLRGEVEGQRFYWLATGLVLALASIAAILHLAHPDRAYDALINLRHAWLSRE
ILGATLFGAAVGVTFLAKGHKAMALIASVFGVLLVAVQGMTYAAPAMVAIANGFTMLLFFITVWVMGCAAIPLLKLRPAV
PALRQGIVVCIAVLIAAPLVWLSGGTVMQMTARSWLASPFYLASLVCLALAFVASRHGDSRPKRLFVLLFVGVFLSRLVF
FGDTVSTIVNIGHLY

Specific function: Terminal Reductase During Anaerobic Growth On Various Sulfoxide And N-Oxide Compounds. The C Subunit Anchors The Other Two Subunits To The Membrane And Stabilize The Catalytic Subunits (By Similarity). [C]

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Integral membrane protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787873, Length=156, Percent_Identity=32.0512820512821, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27623; Mature: 27623

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCHHHHHHHHHCCC
>Mature Secondary Structure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HCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA