Click here to switch to the map view.

The map label for this gene is ynfI [C]

Identifier: 16763987

GI number: 16763987

Start: 673151

End: 673711

Strand: Direct

Name: ynfI [C]

Synonym: STM0610

Alternate gene names: 16763987

Gene position: 673151-673711 (Clockwise)

Preceding gene: 16763986

Following gene: 16763988

Centisome position: 13.86

GC content: 43.32

Gene sequence:

>561_bases
ATGGATTCAATCTATGAATCACTGACGGAATTAGAAAAAACAGGGCTTACATTGCGTGATTTTTTTAATTCTCATGATAG
TCGTTCACTGAAATCTGCCTACGTGAGATTAAATCCCACTGCTGCGGTAAACCTTACCGATCGGGCGTGGCTGGAGGCGG
AGTATGACTTTAATGCGCTATTCGTCGGTCCTGGCAAGCTGCTGGCTGCGCCTTTCGCTTCAGTGTATCTGGAAGATGAT
GCGCTGGTGATGGGAAAGGCGACGCTGGAGATACGGGATTTTATGGCAGCGTTGGGATTATCGGTTAATCAGGAGAGCAA
TATCCCTGACGATCATATTTCCTGCGTGCTGGAATTGACCACACTATTACTGGCTAATACCCGGCAAACGTCACCATACC
GCTCTACTCTCACTCAATATATCAATAACTATTTAACAAAGTGGGTGCCATTATATATCGAAAAAATAAAAACTCATGCA
CAAACGACCACGTTATATACGGTGGCGGACATCTTATTTTATTGGCTTGCTGAATTAAAACGAGAATATCAATATGAGTA
A

Upstream 100 bases:

>100_bases
TTTTTCTGTTTTTTTATCAAAGAAAGATTAAGCGCTTCCGTTAACATGCCCATTCTTTTTTCTTGATTTATATTGCATTT
GTATGTGAGGTTATTTATTC

Downstream 100 bases:

>100_bases
TGAGACGGGACATCTGAACAGACGTTCTTTTTTAAAGGGGATAGTGGCACTGGGCGCCGTTGCGGCTTTACCCGGAGGAT
TACTGACCTCCCGATGCGCG

Product: anaerobic dehydrogenase component

Products: NA

Alternate protein names: Cytoplasmic Chaperone rD

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MDSIYESLTELEKTGLTLRDFFNSHDSRSLKSAYVRLNPTAAVNLTDRAWLEAEYDFNALFVGPGKLLAAPFASVYLEDD
ALVMGKATLEIRDFMAALGLSVNQESNIPDDHISCVLELTTLLLANTRQTSPYRSTLTQYINNYLTKWVPLYIEKIKTHA
QTTTLYTVADILFYWLAELKREYQYE

Sequences:

>Translated_186_residues
MDSIYESLTELEKTGLTLRDFFNSHDSRSLKSAYVRLNPTAAVNLTDRAWLEAEYDFNALFVGPGKLLAAPFASVYLEDD
ALVMGKATLEIRDFMAALGLSVNQESNIPDDHISCVLELTTLLLANTRQTSPYRSTLTQYINNYLTKWVPLYIEKIKTHA
QTTTLYTVADILFYWLAELKREYQYE
>Mature_186_residues
MDSIYESLTELEKTGLTLRDFFNSHDSRSLKSAYVRLNPTAAVNLTDRAWLEAEYDFNALFVGPGKLLAAPFASVYLEDD
ALVMGKATLEIRDFMAALGLSVNQESNIPDDHISCVLELTTLLLANTRQTSPYRSTLTQYINNYLTKWVPLYIEKIKTHA
QTTTLYTVADILFYWLAELKREYQYE

Specific function: Unknown

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21267; Mature: 21267

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSIYESLTELEKTGLTLRDFFNSHDSRSLKSAYVRLNPTAAVNLTDRAWLEAEYDFNAL
CCHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHEEEECCCEEEECCCHHEEEECCCCCEE
FVGPGKLLAAPFASVYLEDDALVMGKATLEIRDFMAALGLSVNQESNIPDDHISCVLELT
EECCCHHHHHHHHHEEECCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
TLLLANTRQTSPYRSTLTQYINNYLTKWVPLYIEKIKTHAQTTTLYTVADILFYWLAELK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REYQYE
HHHCCC
>Mature Secondary Structure
MDSIYESLTELEKTGLTLRDFFNSHDSRSLKSAYVRLNPTAAVNLTDRAWLEAEYDFNAL
CCHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHEEEECCCEEEECCCHHEEEECCCCCEE
FVGPGKLLAAPFASVYLEDDALVMGKATLEIRDFMAALGLSVNQESNIPDDHISCVLELT
EECCCHHHHHHHHHEEECCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
TLLLANTRQTSPYRSTLTQYINNYLTKWVPLYIEKIKTHAQTTTLYTVADILFYWLAELK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REYQYE
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA