Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
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Accession | NC_003197 |
Length | 4,857,432 |
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The map label for this gene is 16763935
Identifier: 16763935
GI number: 16763935
Start: 614804
End: 616456
Strand: Reverse
Name: 16763935
Synonym: STM0557
Alternate gene names: NA
Gene position: 616456-614804 (Counterclockwise)
Preceding gene: 16763936
Following gene: 16763933
Centisome position: 12.69
GC content: 36.78
Gene sequence:
>1653_bases ATGAGAAGAAAAATGGTTAACAATAGATTAAAAATGGTAATCGCTATCCTTATAGTTTTCTCGTTGGTGTATTCAATAGG ATTTATCACACCAATGAACTCTGATGACTATACTTATGCCCTAAGAGAGCTTTCGCTTTCTAGCGTAAAAATGCACTATT TGGGATGGAGCGGAAGGGTTGTGTCAGATACGATCAGCACATCTCTATTAAAGTTTTTCTCCCCGCATATTTACAATGCA ATAAACTCAGCAGCGCTAACATTAATGGTGTTGTGCTGGACAATGATCCCAGCTACATTAACAAAGTCGTCACCGTCCCC ATATGTGATGATTTTCTTATTTTTCTTATACTTCGTTGCAAATCCAGCCCTCGGTCAAACTAACTTCTGGCTTGTTGGGT CAGCAAATTACTTATGGACCAACATGTTCATTGCCATTTATATACTAATTTCTATATATTTAAGCAATGGTAAAAAATCC AATTTAATACTCTTTGTATATGCCATATCATCGATATTTGCAGGTTGCTCAAATGAAAATACATCTCTTGTAGTTGTATT AATTTCTGTAGCATATTTCTTTATAATGAATAGAAATAAATATTTACTGATTGGCGTATTCGGATCTGCAATAGGCGCGG GGGTTCTCCTGCTGGCTCCGGGAAACCTATCCCGTGCGTCTACAATACAAGACTGGTACAATCAACCACTTGCATGGAGG GTTCTTGAGCACTTTTCAGAAAGGCTGCCATCAGCAATGGGGGCATATTGGCAGGTCTATATTGCATTTATAATACTACT AATCTCTGTAGTGTTATCAAGGAATAGTAGCAGCAAACTTATGTTTGGAAGCTTTTTATTCATGCTGGGTGCAATTGCTG CAAATGTTGCGTTCCTTGCATCTCCTGCAATGCCCAGCAGGGCTCTCAATGGAGCACTCTGCTTTATGATTCTTTCGATT TCCTTTGTTGCTCATTCTGCATTTACGAAATTTAACAAGGCTTCCATTTATTTATCTGTTACTACATATGCAATGGCTTT TTTATATTTCATCCCATCATACATCCTCTATTACTCATCAATTAAATCAATAAGCAAACAAACGGAGATTAGGGAAGAAA TAATAGACAGGGCGAAACATAACAAACAAGATCAAGCGATAATTCCTGATTATTACTTTCCACCGGTACTGCATGCAGGC CCAAGTCTTGATACGTTTAACAGTGAAGCAATGTCTAGATACTACGGGATTGATTTGAAAATAACTGCTCCAGGATTTTT CGACTATTCACGAGCCTTTAATTTCAAGCCTCTTAATATTAACGCAAAAATATGTAACAACGTTTATATAAAATCATTAT GGATATATAAACAGCAAATGGGCATTAAAACCTTTGTAATATTTGAGTTTAATAAAAATCCTGCTGATTCTCTTGATGAG AATACAGCGATGTTCATTAGCTTTAAAACAAAGGATGGAAAAATTATAAATGCAGATGTCGACAAGAAGACATTCCAAAT AGACGGAAGATGGCTTTCCGGGCGGGCGATTAACGGCATAGATTCAAATGAATTAGAATCAATTACATCTGGGACATGGG ACGTTAGAACAGGGGCGAGGACAAATGAGAATATTACGGAAATAATTAAATAA
Upstream 100 bases:
>100_bases TTTCTGGGTGGCGTTCAATTGATAGGAATAGGTATTCTTGGGGAATATATTGGCAGGATTTACATAGAAACAAAAAAAAG GCCTAAGTACATAATTAAGA
Downstream 100 bases:
>100_bases CATTCATGTATAATTAATGTTCCCCGCCACCAATGGGTAACGGGCGGCGGGGATTCCTACATATCGTATGTCACAAATGC CCCATCAGGTTTCTTAGCAA
Product: inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MRRKMVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRVVSDTISTSLLKFFSPHIYNA INSAALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFVANPALGQTNFWLVGSANYLWTNMFIAIYILISIYLSNGKKS NLILFVYAISSIFAGCSNENTSLVVVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPLAWR VLEHFSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFMLGAIAANVAFLASPAMPSRALNGALCFMILSI SFVAHSAFTKFNKASIYLSVTTYAMAFLYFIPSYILYYSSIKSISKQTEIREEIIDRAKHNKQDQAIIPDYYFPPVLHAG PSLDTFNSEAMSRYYGIDLKITAPGFFDYSRAFNFKPLNINAKICNNVYIKSLWIYKQQMGIKTFVIFEFNKNPADSLDE NTAMFISFKTKDGKIINADVDKKTFQIDGRWLSGRAINGIDSNELESITSGTWDVRTGARTNENITEIIK
Sequences:
>Translated_550_residues MRRKMVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRVVSDTISTSLLKFFSPHIYNA INSAALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFVANPALGQTNFWLVGSANYLWTNMFIAIYILISIYLSNGKKS NLILFVYAISSIFAGCSNENTSLVVVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPLAWR VLEHFSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFMLGAIAANVAFLASPAMPSRALNGALCFMILSI SFVAHSAFTKFNKASIYLSVTTYAMAFLYFIPSYILYYSSIKSISKQTEIREEIIDRAKHNKQDQAIIPDYYFPPVLHAG PSLDTFNSEAMSRYYGIDLKITAPGFFDYSRAFNFKPLNINAKICNNVYIKSLWIYKQQMGIKTFVIFEFNKNPADSLDE NTAMFISFKTKDGKIINADVDKKTFQIDGRWLSGRAINGIDSNELESITSGTWDVRTGARTNENITEIIK >Mature_550_residues MRRKMVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRVVSDTISTSLLKFFSPHIYNA INSAALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFVANPALGQTNFWLVGSANYLWTNMFIAIYILISIYLSNGKKS NLILFVYAISSIFAGCSNENTSLVVVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPLAWR VLEHFSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFMLGAIAANVAFLASPAMPSRALNGALCFMILSI SFVAHSAFTKFNKASIYLSVTTYAMAFLYFIPSYILYYSSIKSISKQTEIREEIIDRAKHNKQDQAIIPDYYFPPVLHAG PSLDTFNSEAMSRYYGIDLKITAPGFFDYSRAFNFKPLNINAKICNNVYIKSLWIYKQQMGIKTFVIFEFNKNPADSLDE NTAMFISFKTKDGKIINADVDKKTFQIDGRWLSGRAINGIDSNELESITSGTWDVRTGARTNENITEIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61932; Mature: 61932
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRKMVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCC VSDTISTSLLKFFSPHIYNAINSAALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFVA HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC NPALGQTNFWLVGSANYLWTNMFIAIYILISIYLSNGKKSNLILFVYAISSIFAGCSNEN CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCCCC TSLVVVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPLAWR CEEEHHHHHHHHHHHCCCCCEEEEEECHHHHHCCEEEECCCCCCHHHHHHHHHCCCHHHH VLEHFSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFMLGAIAANVAFLA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC SPAMPSRALNGALCFMILSISFVAHSAFTKFNKASIYLSVTTYAMAFLYFIPSYILYYSS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH IKSISKQTEIREEIIDRAKHNKQDQAIIPDYYFPPVLHAGPSLDTFNSEAMSRYYGIDLK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCEEE ITAPGFFDYSRAFNFKPLNINAKICNNVYIKSLWIYKQQMGIKTFVIFEFNKNPADSLDE EECCCCCCHHHCCCCEEEECCHHHHCCEEHHHHHHHHHHCCCEEEEEEEECCCCCCCCCC NTAMFISFKTKDGKIINADVDKKTFQIDGRWLSGRAINGIDSNELESITSGTWDVRTGAR CCEEEEEEECCCCEEEECCCCCEEEEECCEEECCCEECCCCCHHHHHHHCCCCEECCCCC TNENITEIIK CCCCHHHHCC >Mature Secondary Structure MRRKMVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCC VSDTISTSLLKFFSPHIYNAINSAALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFVA HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC NPALGQTNFWLVGSANYLWTNMFIAIYILISIYLSNGKKSNLILFVYAISSIFAGCSNEN CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCCCC TSLVVVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPLAWR CEEEHHHHHHHHHHHCCCCCEEEEEECHHHHHCCEEEECCCCCCHHHHHHHHHCCCHHHH VLEHFSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFMLGAIAANVAFLA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC SPAMPSRALNGALCFMILSISFVAHSAFTKFNKASIYLSVTTYAMAFLYFIPSYILYYSS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH IKSISKQTEIREEIIDRAKHNKQDQAIIPDYYFPPVLHAGPSLDTFNSEAMSRYYGIDLK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCEEE ITAPGFFDYSRAFNFKPLNINAKICNNVYIKSLWIYKQQMGIKTFVIFEFNKNPADSLDE EECCCCCCHHHCCCCEEEECCHHHHCCEEHHHHHHHHHHCCCEEEEEEEECCCCCCCCCC NTAMFISFKTKDGKIINADVDKKTFQIDGRWLSGRAINGIDSNELESITSGTWDVRTGAR CCEEEEEEECCCCEEEECCCCCEEEEECCEEECCCEECCCCCHHHHHHHCCCCEECCCCC TNENITEIIK CCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA