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The map label for this gene is fimI [H]

Identifier: 16763924

GI number: 16763924

Start: 604748

End: 605281

Strand: Direct

Name: fimI [H]

Synonym: STM0544

Alternate gene names: 16763924

Gene position: 604748-605281 (Clockwise)

Preceding gene: 308065939

Following gene: 16763925

Centisome position: 12.45

GC content: 54.12

Gene sequence:

>534_bases
ATGATAAGGAAAGGCGCGGCGCTAGCGGGGCTTGTTTTGATGTCGCCCGTCATTGCGCAGCCGGTAATGGTGGAGAGCGG
GCGTGTTCACCTGCGCGGACAACTGGTCAATGGCGGCTGCGCTGTCGCCACAGAAAGCCAGAATTTGCGCGTATTGATGG
GACAGTACCGCACGAATGCGTTTACCGGTCCTGGCAGCTTCGCTCCCGTCAGCGTTCCATTTTCGTTACGGTTAATCTCC
TGTAGCGCGGAGGTCTGGCGTCATGTCGGCATTGCGTTTGCCGGCGTTACGCCTGCGGAAGATCCCCATGTTTTTCTGGC
CAGCGGCGAGGGTATCGGTAATGCCGGAATCGGCCTGGCATTATTTGATGACCAGCAGCGGCAAATCATACCTAACACGT
TACCGCTTCATTACACGCCCATTTTAACGTCAGAAATGACTTTGCATTTTACTGCCCGCTATCGGGCAATTTCAGAAAAT
ATGACGCCGGGACGAATTCATTCAGAAGTGTGGTTTACGCTGGTTTACCCATGA

Upstream 100 bases:

>100_bases
CACCTTTATCATGAAATACGAATAATCCCGTCAGGGAACGCCAGGGAAGGGAGGCGCCTCAACGGAAGAGGCTATCGGGG
ATAAATAGAGAACATAGCAG

Downstream 100 bases:

>100_bases
ATTTTCTTGCCGACGTGACTCAATGCAAAAGGTATTTTTTACCATGCTGAATAGTATAAAAGTAGGCTTTATTGTTCTTC
TCACGTTATTTACTTCGCTG

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MIRKGAALAGLVLMSPVIAQPVMVESGRVHLRGQLVNGGCAVATESQNLRVLMGQYRTNAFTGPGSFAPVSVPFSLRLIS
CSAEVWRHVGIAFAGVTPAEDPHVFLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHYTPILTSEMTLHFTARYRAISEN
MTPGRIHSEVWFTLVYP

Sequences:

>Translated_177_residues
MIRKGAALAGLVLMSPVIAQPVMVESGRVHLRGQLVNGGCAVATESQNLRVLMGQYRTNAFTGPGSFAPVSVPFSLRLIS
CSAEVWRHVGIAFAGVTPAEDPHVFLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHYTPILTSEMTLHFTARYRAISEN
MTPGRIHSEVWFTLVYP
>Mature_177_residues
MIRKGAALAGLVLMSPVIAQPVMVESGRVHLRGQLVNGGCAVATESQNLRVLMGQYRTNAFTGPGSFAPVSVPFSLRLIS
CSAEVWRHVGIAFAGVTPAEDPHVFLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHYTPILTSEMTLHFTARYRAISEN
MTPGRIHSEVWFTLVYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87082421, Length=151, Percent_Identity=35.0993377483444, Blast_Score=91, Evalue=3e-20,
Organism=Escherichia coli, GI87081753, Length=158, Percent_Identity=27.8481012658228, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1790773, Length=157, Percent_Identity=29.9363057324841, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787781, Length=171, Percent_Identity=29.2397660818713, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19098; Mature: 19098

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKGAALAGLVLMSPVIAQPVMVESGRVHLRGQLVNGGCAVATESQNLRVLMGQYRTNA
CCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEEEEECCCEEEEECCCCEEEEEEECCCCE
FTGPGSFAPVSVPFSLRLISCSAEVWRHVGIAFAGVTPAEDPHVFLASGEGIGNAGIGLA
ECCCCCCCEEECCEEEEEEEECHHHHHHHCEEEECCCCCCCCEEEEEECCCCCCCCEEEE
LFDDQQRQIIPNTLPLHYTPILTSEMTLHFTARYRAISENMTPGRIHSEVWFTLVYP
EECCCCCEECCCCCCEEEEEEEECCEEEEEEEEEEEECCCCCCCEEECEEEEEEECC
>Mature Secondary Structure
MIRKGAALAGLVLMSPVIAQPVMVESGRVHLRGQLVNGGCAVATESQNLRVLMGQYRTNA
CCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEEEEECCCEEEEECCCCEEEEEEECCCCE
FTGPGSFAPVSVPFSLRLISCSAEVWRHVGIAFAGVTPAEDPHVFLASGEGIGNAGIGLA
ECCCCCCCEEECCEEEEEEEECHHHHHHHCEEEECCCCCCCCEEEEEECCCCCCCCEEEE
LFDDQQRQIIPNTLPLHYTPILTSEMTLHFTARYRAISENMTPGRIHSEVWFTLVYP
EECCCCCEECCCCCCEEEEEEEECCEEEEEEEEEEEECCCCCCCEEECEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8288102; 11677608; 12644504 [H]