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The map label for this gene is ybbM [H]

Identifier: 16763883

GI number: 16763883

Start: 563150

End: 563929

Strand: Direct

Name: ybbM [H]

Synonym: STM0503

Alternate gene names: 16763883

Gene position: 563150-563929 (Clockwise)

Preceding gene: 16763882

Following gene: 16763887

Centisome position: 11.59

GC content: 51.41

Gene sequence:

>780_bases
ATGAACGAGCATAATATTACCAATACCTCGCTGGCGTTATCGATGCTGCTGGTGGTGGTCGCGATGCTCATCAGTCACAA
GGAAAAGCTGGCGCTGGAAAAAGATATTCTGTGGAGCGTATGCCGGGCGGTGATACAGCTCATTATTGTCGGCTATGTAC
TGAAATACATCTTTGGCGTTAATCATGCCGCCCTGACGCTACTGATGGTGCTGTTCATCTGTTTTAACGCCGCATGGAAC
GCGCAAAAGCGCAGTAAATATATCGATAAGGCATTTCTCTCCTCGTTTATCGCCATCACCGTCGGCGCCGGGCTAACGCT
GACGGTACTGGTGCTTACCGGTTCGATTGAATTTGCGCCGATGCAGGTGATTCCCATCGCTGGCATGGTCGCCGGTAATG
CGATGGTAGCGGTAGGGCTGTGCTACAACCAACTGGGGCTGCGTTTTCATAGCGAGCAGCAGCAAATCCAGGAAAAGTTA
AGTTTGGGCGCAACGCCGAAAATGGCCTCCGCCGGGCTTATCCGCGATAGCATCCGCGCATCGCTTATCCCGACGATCGA
CTCGGCAAAGACCGTTGGGCTGGTGAGCCTGCCGGGGATGATGTCCGGGCTGATTTTTGCCGGGATCGATCCGGTAAAAG
CGATTAAATATCAAATTATGGTAACGTTTATGCTGTTGTCGACAGCCAGCCTGTCTACCATCATTGCCTGCTATTTAACC
TACCGGAAGTTCTATAATTCGCGTCATCAGTTGGTAGTGATGCCGCTCAAGAAATCATGA

Upstream 100 bases:

>100_bases
GTCGCTGTCTTGTGGGTAACGCATGATAAAGATGAAATTCAACACGCGGATAAGGTGATAACGTTAACGCCATCTGCCGG
AGAGATGCAGGAGGCGCGTT

Downstream 100 bases:

>100_bases
TAGTTGCCGGATGATGGCGCAAGCGCCTTATCCGGCCTGAGGACGACAGGTAGGCCAGATAAGCGCGCCATCAGGCAAGA
GAGGATTAATACAGTAGCGC

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNEHNITNTSLALSMLLVVVAMLISHKEKLALEKDILWSVCRAVIQLIIVGYVLKYIFGVNHAALTLLMVLFICFNAAWN
AQKRSKYIDKAFLSSFIAITVGAGLTLTVLVLTGSIEFAPMQVIPIAGMVAGNAMVAVGLCYNQLGLRFHSEQQQIQEKL
SLGATPKMASAGLIRDSIRASLIPTIDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASLSTIIACYLT
YRKFYNSRHQLVVMPLKKS

Sequences:

>Translated_259_residues
MNEHNITNTSLALSMLLVVVAMLISHKEKLALEKDILWSVCRAVIQLIIVGYVLKYIFGVNHAALTLLMVLFICFNAAWN
AQKRSKYIDKAFLSSFIAITVGAGLTLTVLVLTGSIEFAPMQVIPIAGMVAGNAMVAVGLCYNQLGLRFHSEQQQIQEKL
SLGATPKMASAGLIRDSIRASLIPTIDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASLSTIIACYLT
YRKFYNSRHQLVVMPLKKS
>Mature_259_residues
MNEHNITNTSLALSMLLVVVAMLISHKEKLALEKDILWSVCRAVIQLIIVGYVLKYIFGVNHAALTLLMVLFICFNAAWN
AQKRSKYIDKAFLSSFIAITVGAGLTLTVLVLTGSIEFAPMQVIPIAGMVAGNAMVAVGLCYNQLGLRFHSEQQQIQEKL
SLGATPKMASAGLIRDSIRASLIPTIDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASLSTIIACYLT
YRKFYNSRHQLVVMPLKKS

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=258, Percent_Identity=88.3720930232558, Blast_Score=463, Evalue=1e-132,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28244; Mature: 28244

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCEEEEEECCCC
>Mature Secondary Structure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HHHHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]