Click here to switch to the map view.

The map label for this gene is ybaL [H]

Identifier: 16763872

GI number: 16763872

Start: 550350

End: 552026

Strand: Reverse

Name: ybaL [H]

Synonym: STM0492

Alternate gene names: 16763872

Gene position: 552026-550350 (Counterclockwise)

Preceding gene: 16763873

Following gene: 16763870

Centisome position: 11.36

GC content: 57.07

Gene sequence:

>1677_bases
ATGCATCACGCTACCCCGCTTATCACCACCATTGTCGGCGGCCTTGTGCTCGCTTTTATTCTCGGCATGATTGCCAACAA
ATTGCGTATTTCTCCACTGGTGGGATATCTGTTAGCGGGCGTTCTGGCGGGACCTTTTACCCCGGGTTTTGTTGCGGATA
CCAAACTGGCGCCGGAGCTGGCGGAGCTCGGCGTGATTCTATTGATGTTCGGCGTCGGGCTGCATTTTTCGCTGAAGGAT
TTGATGGCGGTAAAGTCTATCGCCATTCCCGGCGCTGTCGCTCAGATAGCGGTGGCGACGCTGCTGGGTATGGCGCTTTC
CGCCGTGCTGGGATGGTCATTAATGACCGGCATCGTTTTTGGGCTCTGTCTGTCTACAGCCAGTACCGTCGTCCTGCTGC
GCGCGCTTGAGGAGCGACAACTCCTTGATAGCCAGCGCGGGCAAATCGCCATCGGCTGGCTGATTGTCGAAGATCTGGTG
ATGGTGCTGACGCTGGTCTTGCTGCCCGCCGTTGCCGGCATGGTGGAAAAAGGCGATGTCGGCATAGCCTCGCTGACAGT
CGATATGGGGATAACCATTGGTAAAGTGGTGGCGTTTATCGCCATCATGATGCTGGTCGGACGCCGCCTGGTGCCGTGGA
TTATGGCCCGCAGCGCCGCCACCGGCTCGCGCGAATTATTTACCCTTTCCGTACTGGCGCTGGCGTTAGGCATTGCGTTT
GGCGCGGTAGAACTGTTTGACGTCTCTTTTGCGCTGGGCGCGTTCTTCGCTGGAATGGTGCTTAATGAGTCGGAACTGAG
TCACCGGGCGGCGCACGATACGTTGCCGCTGCGCGACGCCTTTGCCGTCCTGTTTTTTGTTTCCGTCGGCATGTTGTTCG
ATCCGTTAGTCTTGATTCAACAGCCGCTGGCGGTGTTGGCGACGCTTGCCATTATCGTCTTTGGCAAATCGATCGCTGCG
TTTTTCCTGGTGCGTTTGTTCGGCCACTCGCCGCGAACCGCGCTGACCATTGCCGCCAGCCTGGCGCAAATCGGCGAGTT
CGCCTTTATTCTCGCCGGGCTCGGCATGGCGCTCAACCTGCTGCCGCAAGCGGGACAGAACCTGGTGCTGGCAGGCGCTA
TTTTGTCGATTATGCTTAATCCCGTACTGTTTACCCTGCTGGAGAAGTATCTGGCGAAAACCGAAACGCTGGAAGAGCAA
ACTCTGGAAGAGGCTATCGAAGAAGAGAAGCAAATTCCGGTGGATATCTGTAATCATGCCCTGCTGGTGGGTTTTGGCCG
CGTAGGCAGTCTGCTGGGAGAAAAATTACTGGCGGCGGGGATTCCGCTGGTGGTTATCGAAACGTCCCGTACCCGCGTGG
ATGAACTGCGCGAACGCGGGATTCGCGCCGTACTGGGCAACGCCGCTAACGAAGAAATCATGAATCTGGCGCATCTGGAC
TGCGCTCGCTGGCTGTTATTGACCATCCCCAACGGTTACGAAGCCGGTGAGATTGTCGCCTCAGCGCGGGGAAAAAGTCC
TGATATCGAGATAATCGCCCGCGCGCACTATGATGATGAAGTGAAATATATTACCGAGCGGGGAGCCAATCAGGTAGTGA
TGGGCGAGCGAGAAATTGCCCGGGCGATGCTGGAACTGCTTGAAACGCCGCCCGCGGGTGAAGTCGTCGCCAGTTAA

Upstream 100 bases:

>100_bases
ATCTTTTTATAAAACACAACCATTTTTTATAAACATCCTGATTGAAATTGTCATAAACTATTACCCGGAGTTTTGGAGTC
CAGCAACCAAAGGAGACGGA

Downstream 100 bases:

>100_bases
GGGTTTGCCGGACGGCCCGATGCGCGCAGCGCCATCGGGCAAGCCAGATTAGCGATCCCAGTACGACTCTTCCAGGCTGT
CCTCACGTTCCGGCAGCCCG

Product: cation:proton antiport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MHHATPLITTIVGGLVLAFILGMIANKLRISPLVGYLLAGVLAGPFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKD
LMAVKSIAIPGAVAQIAVATLLGMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLLDSQRGQIAIGWLIVEDLV
MVLTLVLLPAVAGMVEKGDVGIASLTVDMGITIGKVVAFIAIMMLVGRRLVPWIMARSAATGSRELFTLSVLALALGIAF
GAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPLVLIQQPLAVLATLAIIVFGKSIAA
FFLVRLFGHSPRTALTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFTLLEKYLAKTETLEEQ
TLEEAIEEEKQIPVDICNHALLVGFGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMNLAHLD
CARWLLLTIPNGYEAGEIVASARGKSPDIEIIARAHYDDEVKYITERGANQVVMGEREIARAMLELLETPPAGEVVAS

Sequences:

>Translated_558_residues
MHHATPLITTIVGGLVLAFILGMIANKLRISPLVGYLLAGVLAGPFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKD
LMAVKSIAIPGAVAQIAVATLLGMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLLDSQRGQIAIGWLIVEDLV
MVLTLVLLPAVAGMVEKGDVGIASLTVDMGITIGKVVAFIAIMMLVGRRLVPWIMARSAATGSRELFTLSVLALALGIAF
GAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPLVLIQQPLAVLATLAIIVFGKSIAA
FFLVRLFGHSPRTALTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFTLLEKYLAKTETLEEQ
TLEEAIEEEKQIPVDICNHALLVGFGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMNLAHLD
CARWLLLTIPNGYEAGEIVASARGKSPDIEIIARAHYDDEVKYITERGANQVVMGEREIARAMLELLETPPAGEVVAS
>Mature_558_residues
MHHATPLITTIVGGLVLAFILGMIANKLRISPLVGYLLAGVLAGPFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKD
LMAVKSIAIPGAVAQIAVATLLGMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLLDSQRGQIAIGWLIVEDLV
MVLTLVLLPAVAGMVEKGDVGIASLTVDMGITIGKVVAFIAIMMLVGRRLVPWIMARSAATGSRELFTLSVLALALGIAF
GAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPLVLIQQPLAVLATLAIIVFGKSIAA
FFLVRLFGHSPRTALTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFTLLEKYLAKTETLEEQ
TLEEAIEEEKQIPVDICNHALLVGFGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMNLAHLD
CARWLLLTIPNGYEAGEIVASARGKSPDIEIIARAHYDDEVKYITERGANQVVMGEREIARAMLELLETPPAGEVVAS

Specific function: Unknown

COG id: COG4651

COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI157388921, Length=372, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=4e-19,
Organism=Escherichia coli, GI1786685, Length=556, Percent_Identity=94.9640287769784, Blast_Score=1003, Evalue=0.0,
Organism=Escherichia coli, GI1789749, Length=523, Percent_Identity=30.019120458891, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1786232, Length=521, Percent_Identity=28.7907869481766, Blast_Score=168, Evalue=9e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR004771
- InterPro:   IPR016040
- InterPro:   IPR003148 [H]

Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 59257; Mature: 59257

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHATPLITTIVGGLVLAFILGMIANKLRISPLVGYLLAGVLAGPFTPGFVADTKLAPEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
AELGVILLMFGVGLHFSLKDLMAVKSIAIPGAVAQIAVATLLGMALSAVLGWSLMTGIVF
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLCLSTASTVVLLRALEERQLLDSQRGQIAIGWLIVEDLVMVLTLVLLPAVAGMVEKGDV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GIASLTVDMGITIGKVVAFIAIMMLVGRRLVPWIMARSAATGSRELFTLSVLALALGIAF
CEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPLVLIQ
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QPLAVLATLAIIVFGKSIAAFFLVRLFGHSPRTALTIAASLAQIGEFAFILAGLGMALNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPQAGQNLVLAGAILSIMLNPVLFTLLEKYLAKTETLEEQTLEEAIEEEKQIPVDICNHA
HHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLVGFGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMNLAHLD
HHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHH
CARWLLLTIPNGYEAGEIVASARGKSPDIEIIARAHYDDEVKYITERGANQVVMGEREIA
HHHHHHEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCCCCEEECHHHHH
RAMLELLETPPAGEVVAS
HHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHHATPLITTIVGGLVLAFILGMIANKLRISPLVGYLLAGVLAGPFTPGFVADTKLAPEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
AELGVILLMFGVGLHFSLKDLMAVKSIAIPGAVAQIAVATLLGMALSAVLGWSLMTGIVF
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLCLSTASTVVLLRALEERQLLDSQRGQIAIGWLIVEDLVMVLTLVLLPAVAGMVEKGDV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GIASLTVDMGITIGKVVAFIAIMMLVGRRLVPWIMARSAATGSRELFTLSVLALALGIAF
CEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPLVLIQ
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QPLAVLATLAIIVFGKSIAAFFLVRLFGHSPRTALTIAASLAQIGEFAFILAGLGMALNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPQAGQNLVLAGAILSIMLNPVLFTLLEKYLAKTETLEEQTLEEAIEEEKQIPVDICNHA
HHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLVGFGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMNLAHLD
HHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHH
CARWLLLTIPNGYEAGEIVASARGKSPDIEIIARAHYDDEVKYITERGANQVVMGEREIA
HHHHHHEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCCCCEEECHHHHH
RAMLELLETPPAGEVVAS
HHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 7721718 [H]