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The map label for this gene is yajD [H]

Identifier: 16763791

GI number: 16763791

Start: 466561

End: 466908

Strand: Direct

Name: yajD [H]

Synonym: STM0411

Alternate gene names: 16763791

Gene position: 466561-466908 (Clockwise)

Preceding gene: 16763790

Following gene: 16763795

Centisome position: 9.61

GC content: 49.71

Gene sequence:

>348_bases
ATGGCTATCATCCCAAAAAACTACGCGCGCCTGGAAAGCGGCTATCGTGAAAAAGCGCTGAAGCTGTTTCCGTGGGTGTG
CGGACGTTGTTCCCGTGAGTTTGTGTATTCAAATCTGCGTGAGCTGACGGTGCATCATATCGATCATGACCACACCAATA
ACCCGGAAGACGGCAGCAACTGGGAGCTATTGTGCCTCTACTGCCACGATCATGAGCATTCTAAATATACCGAAGCCGAT
CAGTACGGTTCGACGGTCATTGCCGGGGAAGATGCGCAAAAAGATGTCGGCGAGGCGACTTATAACCCGTTTGCCGATCT
GAAAGCGATGATGAACAAAAAGAAATAA

Upstream 100 bases:

>100_bases
TGCTTACCTGGATATATAAGTTGCACAGAATCATTGCTAAAAGCCCGGCTTCGCGGGAAACTGGGCATAACCCTTTGTAT
TATTCAGGTACCTGTTAATT

Downstream 100 bases:

>100_bases
GCAGACTGCTGACAAAGCTGTTGGTGCTGTTGAATGTTAGGTTACGCTTCGCTCCACCCAACGGAATCCGCAATATAAAT
GAATTATTGGTTTTCGTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MAIIPKNYARLESGYREKALKLFPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEAD
QYGSTVIAGEDAQKDVGEATYNPFADLKAMMNKKK

Sequences:

>Translated_115_residues
MAIIPKNYARLESGYREKALKLFPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEAD
QYGSTVIAGEDAQKDVGEATYNPFADLKAMMNKKK
>Mature_114_residues
AIIPKNYARLESGYREKALKLFPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQ
YGSTVIAGEDAQKDVGEATYNPFADLKAMMNKKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786611, Length=115, Percent_Identity=96.5217391304348, Blast_Score=240, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002711
- InterPro:   IPR003615
- InterPro:   IPR015880 [H]

Pfam domain/function: PF01844 HNH [H]

EC number: NA

Molecular weight: Translated: 13307; Mature: 13176

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIPKNYARLESGYREKALKLFPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSN
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
WELLCLYCHDHEHSKYTEADQYGSTVIAGEDAQKDVGEATYNPFADLKAMMNKKK
EEEEEEEEECCCCCCCCCHHHCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
AIIPKNYARLESGYREKALKLFPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSN
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
WELLCLYCHDHEHSKYTEADQYGSTVIAGEDAQKDVGEATYNPFADLKAMMNKKK
EEEEEEEEECCCCCCCCCHHHCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]