Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
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Accession | NC_003197 |
Length | 4,857,432 |
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The map label for this gene is malZ [H]
Identifier: 16763781
GI number: 16763781
Start: 456184
End: 458001
Strand: Direct
Name: malZ [H]
Synonym: STM0401
Alternate gene names: 16763781
Gene position: 456184-458001 (Clockwise)
Preceding gene: 16763780
Following gene: 16763784
Centisome position: 9.39
GC content: 57.59
Gene sequence:
>1818_bases ATGTTGAATGCCTGGCACTTACCGGTTGCCCCATTTGTGAAGCAACATAACGATAAATTAACCATTACGCTGTGGCTGAG CGGAGAAAATCCGCCGTCTCGCGTGACGTTGCGCTCAGAATTCGATAATGAAGAAATCTCACTGGCGATGCGCAAACAGC GCCGCCAGCCGCAGCCGGGCGTGACGGCGTGGCGAGCGACGCTCAATATCGCGTTAGGGCAACCCCGTCGCCGTTACAGC TTTAAATTGCTTTGGCATGACCGCCAGCTTTGGTTTACGCCACAGGGATTTAGCCGTTTTCCGCCTGCGCGTCTGGAACA ATTTGCGGTTGATGTGCCGGATAGCGGCCCGCAGTGGGTCGCCGATCAAATTTTTTATCAGATCTTCCCGGATCGTTTTG CCCGCAGCCAGTCTCGTGAAGCCGGGCAGGACCGGGTGTACTACCATCATGCCGCAGGTCAGGAGATTGTGCTGCGCGAC TGGGACGATCCTTTAACCCCCCAGGCGGGCGGTTCCACCTTTTACGGCGGCTGTCTGAATGGCATTTGTGAGAAGCTGCC GTATCTGAAAAAACTGGGCGTCACAGCGCTATATCTGAATCCGGTATTTACCGCGCCGAGCGTCCATAAGTACGATACGG AAGATTATCGCCATGTCGATCCGCAATTTGGCGGCGATCGGGCGCTGCTACGCCTGCGGCGTAAAACCCAGGTGCAGGGC ATGAGGCTGGTGCTGGATGGCGTGTTTAATCATAGCGGCGACTCGCATGTGTGGTTTGACAGGCATAACCGCAGCACTGG CGGCGCGTGCCATCACCCGGACTCGCCGTGGCGCGACTGGTACTCCTTTTCACCACAAGGCGTGGCGCTGGACTGGCTGG GTTATCCGAGCCTGCCGAAACTCGATTATCAATCAGAAACGCTGGTCGATGAGATCTATCGCGGTGAGGACAGTATCGTT CGTCACTGGCTAAAGGCTCCGTGGAATATGGACGGCTGGCGGCTGGATGTCGTACATATGCTGGGCGAGGCGGGCGGGGC GCGTCATAATTTGCAGCACGTCGCCGGTATTACCCGGGCGGCAAAAGAGGCGCAGCCCGAAGCCTATATTGTGGGGGAAC ATTTCGGCGATGCGCGGCAGTGGCTACAGGCCGATGCGGAAGATGCCGCCATGAATTATCGCGGCTTCACCTTCCCGCTA TGGGGATTTCTCGCCAATACTGATATCGCTTACGAACCACAGCATATTGATGCCCGGACCTGTATCGCGTGGATGGATAA CTACCGCGCCGGGCTGTCACATCAGCAACAACTGCGCATGTTTAATCAACTCGACAGCCATGATACTGCGCGCTTTAAAA CTCTGCTGGGTAAAGACGCGGCGCGCCTGCCGCTGGCGGTGGTCTGGCTGTTTACCTGGCCCGGCGTGCCATGTATTTAT TACGGCGATGAAGTCGGCGTGGACGGCGCAAATGACCCCATGTGCCGCAAACCGTTCCCATGGGATGAACGCAAGCAGGA CGGCAACTTGCTGGCGCTGTACCAGCGTATGGCGAAACTGCGCCAGAGCAGTCTGGCGCTGCGTCGTGGCGGATGCCAGG CGCTGTATGCCGAAGGTGACGTAGTGGTATTCGTGCGAGTTTATCAGCAGCAGCGGGCGCTGGTGGCGATTAACCGGGGC GAGGCCTGTGAAGTGGCGCTGGAAGCGTTGCCGTTGCTGAACGTGGCCGGATGGCAATGTAAAACGGGAAGCGGTGATAT CCGCGAGGGAAGACTTAGTTTACCCGCGATTTCCGCGACGGTATGGATGAATCGTTGA
Upstream 100 bases:
>100_bases CTCCTCCTGGAGCCTCCTCCCCTAATAAACCCCTGGATGATGAGTTATCCTTTAAATCTCTGTGGCAAGGTGGCCCCATT TTCAGTAGAGGGGATACGAG
Downstream 100 bases:
>100_bases GGCGAGGTGGTTCGTAACACCTTACGCATAAAAAAGGCTCGCATTCGCGAGCCTTTTATCAATGCACTGACTTACAGGCT GGAAATGTTCTCAGCCAGGT
Product: maltodextrin glucosidase
Products: NA
Alternate protein names: Alpha-glucosidase [H]
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MLNAWHLPVAPFVKQHNDKLTITLWLSGENPPSRVTLRSEFDNEEISLAMRKQRRQPQPGVTAWRATLNIALGQPRRRYS FKLLWHDRQLWFTPQGFSRFPPARLEQFAVDVPDSGPQWVADQIFYQIFPDRFARSQSREAGQDRVYYHHAAGQEIVLRD WDDPLTPQAGGSTFYGGCLNGICEKLPYLKKLGVTALYLNPVFTAPSVHKYDTEDYRHVDPQFGGDRALLRLRRKTQVQG MRLVLDGVFNHSGDSHVWFDRHNRSTGGACHHPDSPWRDWYSFSPQGVALDWLGYPSLPKLDYQSETLVDEIYRGEDSIV RHWLKAPWNMDGWRLDVVHMLGEAGGARHNLQHVAGITRAAKEAQPEAYIVGEHFGDARQWLQADAEDAAMNYRGFTFPL WGFLANTDIAYEPQHIDARTCIAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGKDAARLPLAVVWLFTWPGVPCIY YGDEVGVDGANDPMCRKPFPWDERKQDGNLLALYQRMAKLRQSSLALRRGGCQALYAEGDVVVFVRVYQQQRALVAINRG EACEVALEALPLLNVAGWQCKTGSGDIREGRLSLPAISATVWMNR
Sequences:
>Translated_605_residues MLNAWHLPVAPFVKQHNDKLTITLWLSGENPPSRVTLRSEFDNEEISLAMRKQRRQPQPGVTAWRATLNIALGQPRRRYS FKLLWHDRQLWFTPQGFSRFPPARLEQFAVDVPDSGPQWVADQIFYQIFPDRFARSQSREAGQDRVYYHHAAGQEIVLRD WDDPLTPQAGGSTFYGGCLNGICEKLPYLKKLGVTALYLNPVFTAPSVHKYDTEDYRHVDPQFGGDRALLRLRRKTQVQG MRLVLDGVFNHSGDSHVWFDRHNRSTGGACHHPDSPWRDWYSFSPQGVALDWLGYPSLPKLDYQSETLVDEIYRGEDSIV RHWLKAPWNMDGWRLDVVHMLGEAGGARHNLQHVAGITRAAKEAQPEAYIVGEHFGDARQWLQADAEDAAMNYRGFTFPL WGFLANTDIAYEPQHIDARTCIAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGKDAARLPLAVVWLFTWPGVPCIY YGDEVGVDGANDPMCRKPFPWDERKQDGNLLALYQRMAKLRQSSLALRRGGCQALYAEGDVVVFVRVYQQQRALVAINRG EACEVALEALPLLNVAGWQCKTGSGDIREGRLSLPAISATVWMNR >Mature_605_residues MLNAWHLPVAPFVKQHNDKLTITLWLSGENPPSRVTLRSEFDNEEISLAMRKQRRQPQPGVTAWRATLNIALGQPRRRYS FKLLWHDRQLWFTPQGFSRFPPARLEQFAVDVPDSGPQWVADQIFYQIFPDRFARSQSREAGQDRVYYHHAAGQEIVLRD WDDPLTPQAGGSTFYGGCLNGICEKLPYLKKLGVTALYLNPVFTAPSVHKYDTEDYRHVDPQFGGDRALLRLRRKTQVQG MRLVLDGVFNHSGDSHVWFDRHNRSTGGACHHPDSPWRDWYSFSPQGVALDWLGYPSLPKLDYQSETLVDEIYRGEDSIV RHWLKAPWNMDGWRLDVVHMLGEAGGARHNLQHVAGITRAAKEAQPEAYIVGEHFGDARQWLQADAEDAAMNYRGFTFPL WGFLANTDIAYEPQHIDARTCIAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGKDAARLPLAVVWLFTWPGVPCIY YGDEVGVDGANDPMCRKPFPWDERKQDGNLLALYQRMAKLRQSSLALRRGGCQALYAEGDVVVFVRVYQQQRALVAINRG EACEVALEALPLLNVAGWQCKTGSGDIREGRLSLPAISATVWMNR
Specific function: May play a role in regulating the intracellular level of maltotriose. Cleaves glucose from the reducing end of maltotriose and longer maltodextrins with a chain length of up to 7 glucose units [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=489, Percent_Identity=22.9038854805726, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI1786604, Length=604, Percent_Identity=83.112582781457, Blast_Score=1055, Evalue=0.0, Organism=Escherichia coli, GI1790687, Length=186, Percent_Identity=29.0322580645161, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6321726, Length=265, Percent_Identity=25.2830188679245, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322241, Length=265, Percent_Identity=24.5283018867925, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6322021, Length=265, Percent_Identity=24.5283018867925, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6324416, Length=265, Percent_Identity=24.5283018867925, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6322245, Length=202, Percent_Identity=27.2277227722772, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321731, Length=176, Percent_Identity=27.8409090909091, Blast_Score=71, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6319776, Length=176, Percent_Identity=27.8409090909091, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24586593, Length=521, Percent_Identity=23.8003838771593, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI24586599, Length=511, Percent_Identity=23.8747553816047, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI24586597, Length=501, Percent_Identity=23.9520958083832, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI45549022, Length=200, Percent_Identity=28.5, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24586587, Length=93, Percent_Identity=40.8602150537634, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24586589, Length=370, Percent_Identity=25.1351351351351, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24586591, Length=378, Percent_Identity=23.8095238095238, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI221330053, Length=112, Percent_Identity=33.0357142857143, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI24583747, Length=86, Percent_Identity=39.5348837209302, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24583749, Length=86, Percent_Identity=39.5348837209302, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR004185 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR017069 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF02903 Alpha-amylase_N [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 69057; Mature: 69057
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNAWHLPVAPFVKQHNDKLTITLWLSGENPPSRVTLRSEFDNEEISLAMRKQRRQPQPG CCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCC VTAWRATLNIALGQPRRRYSFKLLWHDRQLWFTPQGFSRFPPARLEQFAVDVPDSGPQWV CEEEEEEEEEEECCCCCCEEEEEEEECCEEEECCCCCCCCCHHHHHHHEECCCCCCCHHH ADQIFYQIFPDRFARSQSREAGQDRVYYHHAAGQEIVLRDWDDPLTPQAGGSTFYGGCLN HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCEEHHHHH GICEKLPYLKKLGVTALYLNPVFTAPSVHKYDTEDYRHVDPQFGGDRALLRLRRKTQVQG HHHHHCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH MRLVLDGVFNHSGDSHVWFDRHNRSTGGACHHPDSPWRDWYSFSPQGVALDWLGYPSLPK HHHEEHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCC LDYQSETLVDEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARHNLQHVAGITRA CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHH AKEAQPEAYIVGEHFGDARQWLQADAEDAAMNYRGFTFPLWGFLANTDIAYEPQHIDART HHHCCCCEEEEECCCCHHHHHHHCCCHHHHCCCCCCCCHHHHHHCCCCCEECCCCCCHHH CIAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGKDAARLPLAVVWLFTWPGVPCIY HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHCCEEEEEEECCCCCCEEE YGDEVGVDGANDPMCRKPFPWDERKQDGNLLALYQRMAKLRQSSLALRRGGCQALYAEGD ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC VVVFVRVYQQQRALVAINRGEACEVALEALPLLNVAGWQCKTGSGDIREGRLSLPAISAT EEEEEEEHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEEEEE VWMNR EEECC >Mature Secondary Structure MLNAWHLPVAPFVKQHNDKLTITLWLSGENPPSRVTLRSEFDNEEISLAMRKQRRQPQPG CCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCC VTAWRATLNIALGQPRRRYSFKLLWHDRQLWFTPQGFSRFPPARLEQFAVDVPDSGPQWV CEEEEEEEEEEECCCCCCEEEEEEEECCEEEECCCCCCCCCHHHHHHHEECCCCCCCHHH ADQIFYQIFPDRFARSQSREAGQDRVYYHHAAGQEIVLRDWDDPLTPQAGGSTFYGGCLN HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCEEHHHHH GICEKLPYLKKLGVTALYLNPVFTAPSVHKYDTEDYRHVDPQFGGDRALLRLRRKTQVQG HHHHHCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH MRLVLDGVFNHSGDSHVWFDRHNRSTGGACHHPDSPWRDWYSFSPQGVALDWLGYPSLPK HHHEEHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCC LDYQSETLVDEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARHNLQHVAGITRA CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHH AKEAQPEAYIVGEHFGDARQWLQADAEDAAMNYRGFTFPLWGFLANTDIAYEPQHIDART HHHCCCCEEEEECCCCHHHHHHHCCCHHHHCCCCCCCCHHHHHHCCCCCEECCCCCCHHH CIAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGKDAARLPLAVVWLFTWPGVPCIY HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHCCEEEEEEECCCCCCEEE YGDEVGVDGANDPMCRKPFPWDERKQDGNLLALYQRMAKLRQSSLALRRGGCQALYAEGD ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC VVVFVRVYQQQRALVAINRGEACEVALEALPLLNVAGWQCKTGSGDIREGRLSLPAISAT EEEEEEEHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEEEEE VWMNR EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1918057; 9278503; 1706703 [H]