Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
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Accession | NC_003197 |
Length | 4,857,432 |
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The map label for this gene is yajF [H]
Identifier: 16763773
GI number: 16763773
Start: 443966
End: 444874
Strand: Direct
Name: yajF [H]
Synonym: STM0393
Alternate gene names: 16763773
Gene position: 443966-444874 (Clockwise)
Preceding gene: 16763771
Following gene: 16763777
Centisome position: 9.14
GC content: 58.09
Gene sequence:
>909_bases GTGCGTATTGGTATCGATTTAGGCGGCACAAAAACGGAAGTCATTGCGCTTGATGATGCAGGAGAGCAGCGGTTTCGCCA TCGTCTGCCTACGCCGCGGGAGGATTATCAGCAAACGATAGAAACCATCGCTACGCTGGTCGACATGGCGGAACAGGCGA CCGGCCAGACCGGTAGCGTCGGCATTGGCATTCCCGGTTCTCTCTCGCCTTACACCGGCGTGGTGAAAAACGCTAACTCT ACGTGGCTTAACGGCCAGCCGTTCGATAGCGATGTGAGCCGTCGTCTGAAGCGTGAAGTGCGGTTAGCCAACGATGCCAA TTGCCTGGCGGTATCAGAGGCGGTGGATGGCGCGGCGGCGGGGGCGCAAACGGTATTTGCGGTGATTATCGGTACCGGGT GTGGCGCGGGCGTAGCGCTAAATGGCCGGGCGCACATCGGCGGCAACGGTACGGCAGGTGAATGGGGCCACAATCCGTTG CCGTGGATGGATGACGATGAGTTGCGTTACCGCGAAGAAATTCCCTGTTATTGCGGTAAACAAGGCTGTATCGAAACCTT TATTTCCGGTACGGGATTTGCCACGGATTACCAGCGTTTGAGCGGTAACGCGCTAAAAGGCGATGAGATTATTCGTCTGG TCGACGCGCAGGACGCCGTGGCGGAACTGGCGTTAAGCCGTTATGAGCTGCGGCTGGCGAAAGCATTATCTCATGTCGTG AATATTCTGGATCCGGATGTCATTGTGCTGGGCGGCGGTATGAGCAATGTTGAGCGCCTGTACAAGACGGTTCCGTCGCT GATGAAATCGTTTGTTTTTGGCGGCGAGTGCGAGACGCCGGTACGTAAGGCGCGGCATGGCGATTCGAGCGGCGTGCGCG GCGCGGCCTGGCTGTGGCCGCTGGCGTAA
Upstream 100 bases:
>100_bases AATCCAGGCGGTATAGTAACGAATTGTCGGCAGGCTTGCATTGCCAATCAGAACGGTGAATTCTACCCTGTTGATATTCC CAAAAAATGAGGAGCGGTAT
Downstream 100 bases:
>100_bases CGTTGTTAGCCGGATGGCGCGTCATCCGGCAACCGGCGTGACCGATGGCTGCTTGTGTTTTAGACGTCCGTATACCAGCA ACGACGACATGGCGGAAAAC
Product: fructokinase
Products: NA
Alternate protein names: D-fructose kinase; Manno(fructo)kinase [H]
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MRIGIDLGGTKTEVIALDDAGEQRFRHRLPTPREDYQQTIETIATLVDMAEQATGQTGSVGIGIPGSLSPYTGVVKNANS TWLNGQPFDSDVSRRLKREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVALNGRAHIGGNGTAGEWGHNPL PWMDDDELRYREEIPCYCGKQGCIETFISGTGFATDYQRLSGNALKGDEIIRLVDAQDAVAELALSRYELRLAKALSHVV NILDPDVIVLGGGMSNVERLYKTVPSLMKSFVFGGECETPVRKARHGDSSGVRGAAWLWPLA
Sequences:
>Translated_302_residues MRIGIDLGGTKTEVIALDDAGEQRFRHRLPTPREDYQQTIETIATLVDMAEQATGQTGSVGIGIPGSLSPYTGVVKNANS TWLNGQPFDSDVSRRLKREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVALNGRAHIGGNGTAGEWGHNPL PWMDDDELRYREEIPCYCGKQGCIETFISGTGFATDYQRLSGNALKGDEIIRLVDAQDAVAELALSRYELRLAKALSHVV NILDPDVIVLGGGMSNVERLYKTVPSLMKSFVFGGECETPVRKARHGDSSGVRGAAWLWPLA >Mature_302_residues MRIGIDLGGTKTEVIALDDAGEQRFRHRLPTPREDYQQTIETIATLVDMAEQATGQTGSVGIGIPGSLSPYTGVVKNANS TWLNGQPFDSDVSRRLKREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVALNGRAHIGGNGTAGEWGHNPL PWMDDDELRYREEIPCYCGKQGCIETFISGTGFATDYQRLSGNALKGDEIIRLVDAQDAVAELALSRYELRLAKALSHVV NILDPDVIVLGGGMSNVERLYKTVPSLMKSFVFGGECETPVRKARHGDSSGVRGAAWLWPLA
Specific function: Catalyzes the phosphorylation of fructose to fructose-6- P. Has also low level glucokinase activity in vitro. Is not able to phosphorylate D-ribose, D-mannitol, D-sorbitol, inositol, and L-threonine [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Escherichia coli, GI87081733, Length=300, Percent_Identity=88.6666666666667, Blast_Score=556, Evalue=1e-160, Organism=Escherichia coli, GI1787363, Length=301, Percent_Identity=38.8704318936877, Blast_Score=203, Evalue=1e-53, Organism=Escherichia coli, GI1786891, Length=272, Percent_Identity=23.1617647058824, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI1790522, Length=206, Percent_Identity=29.6116504854369, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 32246; Mature: 32246
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGIDLGGTKTEVIALDDAGEQRFRHRLPTPREDYQQTIETIATLVDMAEQATGQTGSV CEEEEECCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE GIGIPGSLSPYTGVVKNANSTWLNGQPFDSDVSRRLKREVRLANDANCLAVSEAVDGAAA EECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHH GAQTVFAVIIGTGCGAGVALNGRAHIGGNGTAGEWGHNPLPWMDDDELRYREEIPCYCGK HHHHEEHHEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC QGCIETFISGTGFATDYQRLSGNALKGDEIIRLVDAQDAVAELALSRYELRLAKALSHVV HHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH NILDPDVIVLGGGMSNVERLYKTVPSLMKSFVFGGECETPVRKARHGDSSGVRGAAWLWP HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCEECC LA CC >Mature Secondary Structure MRIGIDLGGTKTEVIALDDAGEQRFRHRLPTPREDYQQTIETIATLVDMAEQATGQTGSV CEEEEECCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE GIGIPGSLSPYTGVVKNANSTWLNGQPFDSDVSRRLKREVRLANDANCLAVSEAVDGAAA EECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHH GAQTVFAVIIGTGCGAGVALNGRAHIGGNGTAGEWGHNPLPWMDDDELRYREEIPCYCGK HHHHEEHHEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC QGCIETFISGTGFATDYQRLSGNALKGDEIIRLVDAQDAVAELALSRYELRLAKALSHVV HHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH NILDPDVIVLGGGMSNVERLYKTVPSLMKSFVFGGECETPVRKARHGDSSGVRGAAWLWP HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCEECC LA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8807285; 9278503; 1744033 [H]