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The map label for this gene is ybeJ [H]

Identifier: 16763686

GI number: 16763686

Start: 346974

End: 347795

Strand: Direct

Name: ybeJ [H]

Synonym: STM0303

Alternate gene names: 16763686

Gene position: 346974-347795 (Clockwise)

Preceding gene: 16763685

Following gene: 16763687

Centisome position: 7.14

GC content: 51.58

Gene sequence:

>822_bases
ATGTCTTATGCACGACATTTACCGGTATTAATGTATCACCATGTCAGTGATAAACCCGGACAGATAACCTTATCTCCCCG
TACGTTCCGGGCGCAGATGAAATGGCTGGCCGAATCTGGCTGGAAAACCGTTACTGCTGCAGAGGTGGAAGCTTTTTATC
ATGGTGCAAGATTGCCTCGTAAAAGCGTCATGCTGACCTTTGATGGCGGCTGGCTGGATAACTGGTTGCAGGTTTTTCCG
GTGCTGCAGGAGTTTAATCTGCATGCGCATCTCTTTCTTGTGACCAGTTTGATCAGTGACGGACCGGTCCGTATTCCTGC
AGGCGAACCGGTGTACTCTCATGATGAGTGTCAAATGCTGGTTAAACAAGGCCGGGCTGATGAGGTCATGCTGCGCTGGT
CAGAGGTCCGGGAGATGCACCTCAGTGGCCTTGTTGAGTTTCACTCGCACACGCACACCCACCGACGCTGGGACCAGAAG
CCTGTGTCCCGTAATCCGTCGGATTTGCTTCGTGTCGATATTCTTCTTAGTCGTAAGCGGATGAGGGAGATGCTGGGTTA
TTGCAGTCAGCATCTGTGCTGGCCTGAGGGCTGGTATTGTTCTGACTATATTCATGTGGCTGAAGAGTTGGGGTTCACAT
ACCTGTATACCACAGAAAGGCGTATGAACAATCCAGTCATCGGTTCACAGCGTATTGGTCGTATCAACGCAAAGGAGCGA
AAGAATGTGGGCTGGCTGAAACGTCGTCTGTTTTATCACACCACGCCCGGATTTTCTTCGCTGCTGGCCCGGCATAAGGG
GGCACGTCGGATAGCTGACTGA

Upstream 100 bases:

>100_bases
GGTATTCATATGTGATATTTAAGATTTTATGTTTAGGGGGCTTTTTCTTGTCCCCTCAGGCGTAAAAATAATTTATTTTT
TACATAAAGGAATAAAGCAT

Downstream 100 bases:

>100_bases
GCCAGAGACCAGGATGAAAGTGCTGCATACCGAATCCTCCCCCATCATCGGCGGGCAGGGGTTGTAGGCTATATCCCAAA
TGATGGTGCTGATTTTGAGC

Product: xylanase/chitin deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGGWLDNWLQVFP
VLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQK
PVSRNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAKER
KNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD

Sequences:

>Translated_273_residues
MSYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGGWLDNWLQVFP
VLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQK
PVSRNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAKER
KNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD
>Mature_272_residues
SYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPRKSVMLTFDGGWLDNWLQVFPV
LQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRADEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQKP
VSRNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAKERK
NVGWLKRRLFYHTTPGFSSLLARHKGARRIAD

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=232, Percent_Identity=27.1551724137931, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787260, Length=245, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 31922; Mature: 31791

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPR
CCCHHHCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCC
KSVMLTFDGGWLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQML
CEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHH
VKQGRADEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSRNPSDLLRVDILLSRKR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
MREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAKER
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEEEHHHCCCCCCCCCCCCCCCCHHH
KNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD
CCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAEVEAFYHGARLPR
CCHHHCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCC
KSVMLTFDGGWLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQML
CEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHH
VKQGRADEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSRNPSDLLRVDILLSRKR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
MREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINAKER
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEEEHHHCCCCCCCCCCCCCCCCHHH
KNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD
CCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]