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The map label for this gene is mioC [H]

Identifier: 167626211

GI number: 167626211

Start: 5217876

End: 5218316

Strand: Reverse

Name: mioC [H]

Synonym: Shal_4306

Alternate gene names: 167626211

Gene position: 5218316-5217876 (Counterclockwise)

Preceding gene: 167626214

Following gene: 167626210

Centisome position: 99.84

GC content: 43.54

Gene sequence:

>441_bases
ATGGCAAAAGTAGACATTTTAGTCGGCACCACACTAGGCAGCGCAGAATATGTTGCGGATGAAATATCCGATCAATTAAG
CGATTTAGGCCATGAAACTATCGTTCATTTAACCCCAAATCTGAGCGATCTTAGCCAAGATTCACTTTGGTTAATCGTTT
CTTCAACCCATGGAGCAGGCGATCTCCCCGATAATATAGTGCCATTTTTCGACGAGATCCAAGCCCAAAACCCCGATCTT
AGCGCAATCAAATTTGCCTTATGTGCCATCGGTGATTCTAGCTACGACACTTTTTGTCAGGGCCCAGAAAAATTAGTCGA
GCAGCTTAAATTATGCGGTGCACAAGTCTATGTGGATAAGATCCAGATCGATGTGCAATACGATCCTATTCCAGAAGAGC
CAGCATTATCATGGCTTAGCAGCTGGCAAGATCAACTATAA

Upstream 100 bases:

>100_bases
CACGTAAATAATGAGCAGCAATAATCTATAATTTGACCTTAATATAGCAAGGGAATAGACAGATTAAGCTCTATTTAGAC
AGTAATAATTAGGACAAATA

Downstream 100 bases:

>100_bases
GATCTCATTTCACCCCGCTTTTGTTGTTTATCTTTTCTGTAATGCACAGATTAGATCTAACTTATCCACATATAACCTTT
TTATTTAATAAATATGTGGA

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MAKVDILVGTTLGSAEYVADEISDQLSDLGHETIVHLTPNLSDLSQDSLWLIVSSTHGAGDLPDNIVPFFDEIQAQNPDL
SAIKFALCAIGDSSYDTFCQGPEKLVEQLKLCGAQVYVDKIQIDVQYDPIPEEPALSWLSSWQDQL

Sequences:

>Translated_146_residues
MAKVDILVGTTLGSAEYVADEISDQLSDLGHETIVHLTPNLSDLSQDSLWLIVSSTHGAGDLPDNIVPFFDEIQAQNPDL
SAIKFALCAIGDSSYDTFCQGPEKLVEQLKLCGAQVYVDKIQIDVQYDPIPEEPALSWLSSWQDQL
>Mature_145_residues
AKVDILVGTTLGSAEYVADEISDQLSDLGHETIVHLTPNLSDLSQDSLWLIVSSTHGAGDLPDNIVPFFDEIQAQNPDLS
AIKFALCAIGDSSYDTFCQGPEKLVEQLKLCGAQVYVDKIQIDVQYDPIPEEPALSWLSSWQDQL

Specific function: Probable electron transporter required for biotin synthase activity [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1790181, Length=146, Percent_Identity=44.5205479452055, Blast_Score=139, Evalue=6e-35,
Organism=Escherichia coli, GI1789154, Length=144, Percent_Identity=37.5, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015702
- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 15980; Mature: 15849

Theoretical pI: Translated: 3.70; Mature: 3.70

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVDILVGTTLGSAEYVADEISDQLSDLGHETIVHLTPNLSDLSQDSLWLIVSSTHGAG
CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCCCCC
DLPDNIVPFFDEIQAQNPDLSAIKFALCAIGDSSYDTFCQGPEKLVEQLKLCGAQVYVDK
CCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHCCHHEEEEE
IQIDVQYDPIPEEPALSWLSSWQDQL
EEEEEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AKVDILVGTTLGSAEYVADEISDQLSDLGHETIVHLTPNLSDLSQDSLWLIVSSTHGAG
CEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCCCCC
DLPDNIVPFFDEIQAQNPDLSAIKFALCAIGDSSYDTFCQGPEKLVEQLKLCGAQVYVDK
CCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHCCHHEEEEE
IQIDVQYDPIPEEPALSWLSSWQDQL
EEEEEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]