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The map label for this gene is 167626188

Identifier: 167626188

GI number: 167626188

Start: 5190992

End: 5192554

Strand: Reverse

Name: 167626188

Synonym: Shal_4283

Alternate gene names: NA

Gene position: 5192554-5190992 (Counterclockwise)

Preceding gene: 167626190

Following gene: 167626180

Centisome position: 99.34

GC content: 46.83

Gene sequence:

>1563_bases
ATGAACAATTTATTAAGGCTTAGCGTATCGGCCTTGGCTGTGAGCAGCATGTTAGCGCTTGCTGGCTGTGGTAGCGATAA
CTCCCCTACACCGACTCCCGAACCTCAACCAAGGGTATTAACAGGTATCTTTTCTGATAGTCCTGTGGCGGGCATTGGTT
ATGAGACCACAGATCACAGCGGAGTGACCGATGCTCAAGGACTGTTTAGTTATAACGAGGGGGAATCGGTAGAGTTCTAC
ATAGGTGCGACACGTTTTCCGAGCGTCACAGGTCAGGATGAGGTGACTCCGATGGACCTATATCAAACGGATACGGCTGA
TCATACCGGGGTGATCAATACCTTGCGTTTACTGCAGTCACTCGATACCGATAATGATCCGGATACGGGAATTCAATTAG
CTGAAGATATTCATGAAACCTTAGCGGGTCATGAAGTGGATCCAACTGCGGATAACTTTGATGAGCAGGCGCAAGAAGCG
CTGGTTGCATCTGGTTTGGCTGCTGAAGATCTCGTCGCTGCCGATGAGGCGCTAGCTCATTTTGGTCAGAGTCGAGGCTA
TCAACTGACGGACTTAACAGGCCAATGGCATACGGTATTCTTTACCACACCTGTTGCCGGAACATACTCAGCCGATGCCT
TTAGTTATGTGGTCGAGGAGTGGATCATCGATGCCGAGGGTAATGTCACCATGGAGGCTAAGGTTAAGAGTTATGGTGAG
TTAGATACCGATACGTTTAAAGTTAACTTAAGTGAAAGCGGTATGTTGAGTTTCGCAGAGATTGAAAACCTTGATATGGG
CTTAAGCAGCAATAAAGATAAGATTGCGAACTACTTTGCTGAAGATGGTGAGCAAGAGCTTGGATTGTCTATAAAGCTAG
CTGGTGGGCAGCAGTTGAGTGATCTCGAAGGCCAATGGTGGGGAACTGGGATTGAAACCCCTGTGAGTGCCAACTTTAAT
CAAAACGAATTTGGTGTCTGGATCGATAAGCTTGTAATTGACGACCAAGGTAAGGCTGATATTACAGAGCTTACTTTAGG
AGATCAGCAAGCGAGCAGAGAGGTCGAGATAGTTCAGTTTGCTATGGATGAGATGGGCAAGATCACCATAGAGGACGATG
ATGAAGTTGCCGTGACTTACCTGTCTCGTGGTAAAGATCTAATCCTACGTCATAGCCACAAAGATACACGGCAGAATATG
TCGGTATTGCTCAGGGCAAACCCCTCTCCTGTACTTGCTGACTTAGAGGGAAGTTGGCGCCTGTATAATTTACAGATGCC
TGATGATGGCAGTATGAACTCCGATGGATTTGGTTACTGGATCGTAGAGCTTGAGTTTGATGCCGATGGTCTTGCCGTTT
GGAGTCATGTGGCAACTTCTGAAGATGAGGTGTTGACCGAGCAATCTATGCAGATGAGTTTAGTTGATGGTTTGTTTATT
AGTGAAGAGGATAAGTGGGCGATGAACCAAGACAAAGACATCATGGTCGTGGTTTCACAATGGGCTGAGGGGGAAAGTGA
GTTTTCTGCCTATGCCATTGCCATTAAGCAAGTGACGCCATAA

Upstream 100 bases:

>100_bases
GTAAACTCGTTATTTATCCTAACCTATCCCCCTTAGGGGGGATGCCGCAGTCATTGGGTTATCGCATGCTAACCATAGGC
CAATATCAAGGAGATAAATA

Downstream 100 bases:

>100_bases
GTTTTAAAGAAAAGGGAAAAGCCTGCAAAATCTGCAGGTTTTTTTTATATTTTTGTTAGGTTATTAACTGTTAAAGCCAA
TTGTTACTAGTAGTTGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MNNLLRLSVSALAVSSMLALAGCGSDNSPTPTPEPQPRVLTGIFSDSPVAGIGYETTDHSGVTDAQGLFSYNEGESVEFY
IGATRFPSVTGQDEVTPMDLYQTDTADHTGVINTLRLLQSLDTDNDPDTGIQLAEDIHETLAGHEVDPTADNFDEQAQEA
LVASGLAAEDLVAADEALAHFGQSRGYQLTDLTGQWHTVFFTTPVAGTYSADAFSYVVEEWIIDAEGNVTMEAKVKSYGE
LDTDTFKVNLSESGMLSFAEIENLDMGLSSNKDKIANYFAEDGEQELGLSIKLAGGQQLSDLEGQWWGTGIETPVSANFN
QNEFGVWIDKLVIDDQGKADITELTLGDQQASREVEIVQFAMDEMGKITIEDDDEVAVTYLSRGKDLILRHSHKDTRQNM
SVLLRANPSPVLADLEGSWRLYNLQMPDDGSMNSDGFGYWIVELEFDADGLAVWSHVATSEDEVLTEQSMQMSLVDGLFI
SEEDKWAMNQDKDIMVVVSQWAEGESEFSAYAIAIKQVTP

Sequences:

>Translated_520_residues
MNNLLRLSVSALAVSSMLALAGCGSDNSPTPTPEPQPRVLTGIFSDSPVAGIGYETTDHSGVTDAQGLFSYNEGESVEFY
IGATRFPSVTGQDEVTPMDLYQTDTADHTGVINTLRLLQSLDTDNDPDTGIQLAEDIHETLAGHEVDPTADNFDEQAQEA
LVASGLAAEDLVAADEALAHFGQSRGYQLTDLTGQWHTVFFTTPVAGTYSADAFSYVVEEWIIDAEGNVTMEAKVKSYGE
LDTDTFKVNLSESGMLSFAEIENLDMGLSSNKDKIANYFAEDGEQELGLSIKLAGGQQLSDLEGQWWGTGIETPVSANFN
QNEFGVWIDKLVIDDQGKADITELTLGDQQASREVEIVQFAMDEMGKITIEDDDEVAVTYLSRGKDLILRHSHKDTRQNM
SVLLRANPSPVLADLEGSWRLYNLQMPDDGSMNSDGFGYWIVELEFDADGLAVWSHVATSEDEVLTEQSMQMSLVDGLFI
SEEDKWAMNQDKDIMVVVSQWAEGESEFSAYAIAIKQVTP
>Mature_520_residues
MNNLLRLSVSALAVSSMLALAGCGSDNSPTPTPEPQPRVLTGIFSDSPVAGIGYETTDHSGVTDAQGLFSYNEGESVEFY
IGATRFPSVTGQDEVTPMDLYQTDTADHTGVINTLRLLQSLDTDNDPDTGIQLAEDIHETLAGHEVDPTADNFDEQAQEA
LVASGLAAEDLVAADEALAHFGQSRGYQLTDLTGQWHTVFFTTPVAGTYSADAFSYVVEEWIIDAEGNVTMEAKVKSYGE
LDTDTFKVNLSESGMLSFAEIENLDMGLSSNKDKIANYFAEDGEQELGLSIKLAGGQQLSDLEGQWWGTGIETPVSANFN
QNEFGVWIDKLVIDDQGKADITELTLGDQQASREVEIVQFAMDEMGKITIEDDDEVAVTYLSRGKDLILRHSHKDTRQNM
SVLLRANPSPVLADLEGSWRLYNLQMPDDGSMNSDGFGYWIVELEFDADGLAVWSHVATSEDEVLTEQSMQMSLVDGLFI
SEEDKWAMNQDKDIMVVVSQWAEGESEFSAYAIAIKQVTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56811; Mature: 56811

Theoretical pI: Translated: 3.76; Mature: 3.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLLRLSVSALAVSSMLALAGCGSDNSPTPTPEPQPRVLTGIFSDSPVAGIGYETTDHS
CCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
GVTDAQGLFSYNEGESVEFYIGATRFPSVTGQDEVTPMDLYQTDTADHTGVINTLRLLQS
CCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCEEHEEECCCCCCCHHHHHHHHHHH
LDTDNDPDTGIQLAEDIHETLAGHEVDPTADNFDEQAQEALVASGLAAEDLVAADEALAH
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FGQSRGYQLTDLTGQWHTVFFTTPVAGTYSADAFSYVVEEWIIDAEGNVTMEAKVKSYGE
HHHCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHEECCCCCEEEEEECCCCCC
LDTDTFKVNLSESGMLSFAEIENLDMGLSSNKDKIANYFAEDGEQELGLSIKLAGGQQLS
CCCCEEEEEECCCCCEEEEHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCC
DLEGQWWGTGIETPVSANFNQNEFGVWIDKLVIDDQGKADITELTLGDQQASREVEIVQF
CCCCCEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCHHHCCCHHHHHH
AMDEMGKITIEDDDEVAVTYLSRGKDLILRHSHKDTRQNMSVLLRANPSPVLADLEGSWR
HHHHCCEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCEE
LYNLQMPDDGSMNSDGFGYWIVELEFDADGLAVWSHVATSEDEVLTEQSMQMSLVDGLFI
EEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEHHHHCCCCHHHHHHHHHHHHHHCCEEE
SEEDKWAMNQDKDIMVVVSQWAEGESEFSAYAIAIKQVTP
CCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MNNLLRLSVSALAVSSMLALAGCGSDNSPTPTPEPQPRVLTGIFSDSPVAGIGYETTDHS
CCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
GVTDAQGLFSYNEGESVEFYIGATRFPSVTGQDEVTPMDLYQTDTADHTGVINTLRLLQS
CCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCEEHEEECCCCCCCHHHHHHHHHHH
LDTDNDPDTGIQLAEDIHETLAGHEVDPTADNFDEQAQEALVASGLAAEDLVAADEALAH
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FGQSRGYQLTDLTGQWHTVFFTTPVAGTYSADAFSYVVEEWIIDAEGNVTMEAKVKSYGE
HHHCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHEECCCCCEEEEEECCCCCC
LDTDTFKVNLSESGMLSFAEIENLDMGLSSNKDKIANYFAEDGEQELGLSIKLAGGQQLS
CCCCEEEEEECCCCCEEEEHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCC
DLEGQWWGTGIETPVSANFNQNEFGVWIDKLVIDDQGKADITELTLGDQQASREVEIVQF
CCCCCEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCHHHCCCHHHHHH
AMDEMGKITIEDDDEVAVTYLSRGKDLILRHSHKDTRQNMSVLLRANPSPVLADLEGSWR
HHHHCCEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCEE
LYNLQMPDDGSMNSDGFGYWIVELEFDADGLAVWSHVATSEDEVLTEQSMQMSLVDGLFI
EEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEHHHHCCCCHHHHHHHHHHHHHHCCEEE
SEEDKWAMNQDKDIMVVVSQWAEGESEFSAYAIAIKQVTP
CCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA