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The map label for this gene is elbB [H]

Identifier: 167626124

GI number: 167626124

Start: 5123194

End: 5123850

Strand: Reverse

Name: elbB [H]

Synonym: Shal_4219

Alternate gene names: 167626124

Gene position: 5123850-5123194 (Counterclockwise)

Preceding gene: 167626126

Following gene: 167626118

Centisome position: 98.03

GC content: 43.84

Gene sequence:

>657_bases
ATGAAAAAAATAGCGGTTCTTTTAAGTGGCTGTGGTGTTTACGATGGTACGGAGTTACATGAGTCTGTTTTAGCACTATT
GGAGATCACTAAATCGGGTGCAAGTTATCAATGTTTCGCGCCTAATATTCCTCAATACCATGTAGTGAGTCATTTAACGG
GCGAAGTGCAAGAGAACGAAACTCGCAATGTTTTAGTGGAATCAGCAAGAATTGCTCGTGGTGACATTAAGGCGGTAGAT
GAACTGAATATTGCTGAGTTTGATGCTTTGGTGATCCCTGGCGGTTTTGGTGCAGCTAAGAATTTATGTGACTTTGCCGT
TACTGAAGCTGAGTATTCGGTCGAACCCAGTGTTGAGCGCTTTATTTCACAGTTTGCCAGCGCCCATAAGCCTGTGGGCT
TTATCTGTATCTCGCCAATCATGATCCCTAAACTATACGGACATGGGGTGAGTGGCACTATTGGATCCGATGAGGCCACT
GCTGCAGCTTTTGAACAACAAGGTGGACAGCATCATGCCGTTTCTGTTCATGATATTGTGGTTGATGAAAAACATAAAGT
CGTGAGTACGCCAGCCTATATGTTGGCGAACGATATTGTTGAAGCGCATTCAGGTATTAGTAAATTGGTCGAGAAAGTGT
TGCAAATGGCTGAGTAG

Upstream 100 bases:

>100_bases
ACTTGATAAAGTGATGACCTAACTTAGCATGATAATTAATCTGATCAAGCGGTTTATTACATTTCTGTTAAAACAATATG
ATATATAAAGAGGCTTTTTA

Downstream 100 bases:

>100_bases
ATTGCCTTAAGCGATAAATTAGCCCGCAAGTATTGCGGGCTAAGCTTTAATTATTAGCGCTTTAATAACTAGCGCTAAAG
AGTGGTTAGATTTTACGGGT

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKKIAVLLSGCGVYDGTELHESVLALLEITKSGASYQCFAPNIPQYHVVSHLTGEVQENETRNVLVESARIARGDIKAVD
ELNIAEFDALVIPGGFGAAKNLCDFAVTEAEYSVEPSVERFISQFASAHKPVGFICISPIMIPKLYGHGVSGTIGSDEAT
AAAFEQQGGQHHAVSVHDIVVDEKHKVVSTPAYMLANDIVEAHSGISKLVEKVLQMAE

Sequences:

>Translated_218_residues
MKKIAVLLSGCGVYDGTELHESVLALLEITKSGASYQCFAPNIPQYHVVSHLTGEVQENETRNVLVESARIARGDIKAVD
ELNIAEFDALVIPGGFGAAKNLCDFAVTEAEYSVEPSVERFISQFASAHKPVGFICISPIMIPKLYGHGVSGTIGSDEAT
AAAFEQQGGQHHAVSVHDIVVDEKHKVVSTPAYMLANDIVEAHSGISKLVEKVLQMAE
>Mature_218_residues
MKKIAVLLSGCGVYDGTELHESVLALLEITKSGASYQCFAPNIPQYHVVSHLTGEVQENETRNVLVESARIARGDIKAVD
ELNIAEFDALVIPGGFGAAKNLCDFAVTEAEYSVEPSVERFISQFASAHKPVGFICISPIMIPKLYGHGVSGTIGSDEAT
AAAFEQQGGQHHAVSVHDIVVDEKHKVVSTPAYMLANDIVEAHSGISKLVEKVLQMAE

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=223, Percent_Identity=44.3946188340807, Blast_Score=192, Evalue=2e-49,
Organism=Homo sapiens, GI296531408, Length=223, Percent_Identity=39.0134529147982, Blast_Score=154, Evalue=4e-38,
Organism=Escherichia coli, GI87082228, Length=218, Percent_Identity=53.6697247706422, Blast_Score=240, Evalue=5e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 23346; Mature: 23346

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAVLLSGCGVYDGTELHESVLALLEITKSGASYQCFAPNIPQYHVVSHLTGEVQENE
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCC
TRNVLVESARIARGDIKAVDELNIAEFDALVIPGGFGAAKNLCDFAVTEAEYSVEPSVER
HHHHHHHHHHHHCCCHHHHHCCCHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHH
FISQFASAHKPVGFICISPIMIPKLYGHGVSGTIGSDEATAAAFEQQGGQHHAVSVHDIV
HHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEHEE
VDEKHKVVSTPAYMLANDIVEAHSGISKLVEKVLQMAE
ECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIAVLLSGCGVYDGTELHESVLALLEITKSGASYQCFAPNIPQYHVVSHLTGEVQENE
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCC
TRNVLVESARIARGDIKAVDELNIAEFDALVIPGGFGAAKNLCDFAVTEAEYSVEPSVER
HHHHHHHHHHHHCCCHHHHHCCCHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHH
FISQFASAHKPVGFICISPIMIPKLYGHGVSGTIGSDEATAAAFEQQGGQHHAVSVHDIV
HHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEHEE
VDEKHKVVSTPAYMLANDIVEAHSGISKLVEKVLQMAE
ECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]