| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is murB [H]
Identifier: 167626056
GI number: 167626056
Start: 5046081
End: 5047106
Strand: Reverse
Name: murB [H]
Synonym: Shal_4151
Alternate gene names: 167626056
Gene position: 5047106-5046081 (Counterclockwise)
Preceding gene: 167626058
Following gene: 167626055
Centisome position: 96.56
GC content: 43.47
Gene sequence:
>1026_bases ATGCCAACCTGTCAATCATATTCATTACAACCTCATAATACGTTCGCGTTAGCGCATTCGTGCCGTCGATTAGTTCATGC GTCATCTACTGACCAGCTGGTTGGAATCTGCCGGGATTTGTACCTTACGAAGGAGCCAATGCTTATTTTAGGTAGTGGCA GCAATATTATTCTCTGTGATGATTTCGAAGGTACAGTAGTGCTTGTTGAAACTAAAGGCATTGAAGTTTCAGATGATGAA ACTTACTACGAACTGTCGGTTGCGGCTGGAGAGAATTGGCATGATTTTGTGTGTTTTTGTTTAGCCAACGGGTTTCCCGG GCTAGAGAATTTAGCCATGATCCCTGGAACGGTTGGTGCGGCTCCCATTCAGAATATCGGTGCCTATGGTGTTGAAATGT CGGGTTTTTGTGATTGGGTTGAATACGTAGATTTACGTGACAATAACCTCGTTCAATTGGGGGGCTATGCCTGTCAGTTC GGCTACCGAGATTCTATCTTTAAGCAAGAGTTGTTAGGCAAGGTTGTTATCACTCGAGTGGGATTTAAGTTGCCTAAAGC ATGGGCTCCGAAACTCGAATATGGTCCACTTCAAATATTGAACTGTGCGCAAGTAACACCGAAACAAGTTTTTGATTGTA TCTGTGATACTCGCAAGTCAAAGTTACCCGATCCTAAAGACTACGGTAATGCCGGCAGTTTTTTTAAAAACCCCGTTGTT GATAACAAACAGTTCGCAAGCTTGCTTGAGCGCTATCCAAGCATTGTTGGTTACCCTAGCGTCCAGGGTAAAACTAAAGT TGCAGCAGGCTGGTTAATCGATACTGCAGGTTTAAAAGGTCATCAAATTGGTGGTGCTGCTGTACACGAGAAACAAGCTT TAGTGCTAATCAATAAGGGGAATGCTACGAGTGATGATGTGCTATCACTCGCTAGGTTCGTCGTTGACAAAATAGATGAA GATTTTGGTATCAGGCTTGAACCTGAACCAAGAATGATTTCTGCTAATGGGGAGAGGAGTTTATAG
Upstream 100 bases:
>100_bases GATGAACTCAGAAAGAATTGCAAGTGGCATAAAACGTTCGGCACTTCTTCGGTTTGGTACTTTAGGCTACAATGGCTTTT TACCTGTTAACGATACTCTG
Downstream 100 bases:
>100_bases CATGGCTGAACAATGGAGTCGTAAACGAGAGATCATATCAGAGTTAGCCACAGGAAAATTTGTCTCCGGAGAAACCTTAG CGGCAACTCTTGGGGTCTCT
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPTCQSYSLQPHNTFALAHSCRRLVHASSTDQLVGICRDLYLTKEPMLILGSGSNIILCDDFEGTVVLVETKGIEVSDDE TYYELSVAAGENWHDFVCFCLANGFPGLENLAMIPGTVGAAPIQNIGAYGVEMSGFCDWVEYVDLRDNNLVQLGGYACQF GYRDSIFKQELLGKVVITRVGFKLPKAWAPKLEYGPLQILNCAQVTPKQVFDCICDTRKSKLPDPKDYGNAGSFFKNPVV DNKQFASLLERYPSIVGYPSVQGKTKVAAGWLIDTAGLKGHQIGGAAVHEKQALVLINKGNATSDDVLSLARFVVDKIDE DFGIRLEPEPRMISANGERSL
Sequences:
>Translated_341_residues MPTCQSYSLQPHNTFALAHSCRRLVHASSTDQLVGICRDLYLTKEPMLILGSGSNIILCDDFEGTVVLVETKGIEVSDDE TYYELSVAAGENWHDFVCFCLANGFPGLENLAMIPGTVGAAPIQNIGAYGVEMSGFCDWVEYVDLRDNNLVQLGGYACQF GYRDSIFKQELLGKVVITRVGFKLPKAWAPKLEYGPLQILNCAQVTPKQVFDCICDTRKSKLPDPKDYGNAGSFFKNPVV DNKQFASLLERYPSIVGYPSVQGKTKVAAGWLIDTAGLKGHQIGGAAVHEKQALVLINKGNATSDDVLSLARFVVDKIDE DFGIRLEPEPRMISANGERSL >Mature_340_residues PTCQSYSLQPHNTFALAHSCRRLVHASSTDQLVGICRDLYLTKEPMLILGSGSNIILCDDFEGTVVLVETKGIEVSDDET YYELSVAAGENWHDFVCFCLANGFPGLENLAMIPGTVGAAPIQNIGAYGVEMSGFCDWVEYVDLRDNNLVQLGGYACQFG YRDSIFKQELLGKVVITRVGFKLPKAWAPKLEYGPLQILNCAQVTPKQVFDCICDTRKSKLPDPKDYGNAGSFFKNPVVD NKQFASLLERYPSIVGYPSVQGKTKVAAGWLIDTAGLKGHQIGGAAVHEKQALVLINKGNATSDDVLSLARFVVDKIDED FGIRLEPEPRMISANGERSL
Specific function: Cell wall formation [H]
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790407, Length=335, Percent_Identity=51.044776119403, Blast_Score=348, Evalue=3e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C [H]
EC number: =1.1.1.158 [H]
Molecular weight: Translated: 37340; Mature: 37209
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTCQSYSLQPHNTFALAHSCRRLVHASSTDQLVGICRDLYLTKEPMLILGSGSNIILCD CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEE DFEGTVVLVETKGIEVSDDETYYELSVAAGENWHDFVCFCLANGFPGLENLAMIPGTVGA CCCCEEEEEEECCEEECCCCEEEEEEEECCCCHHHHHHEEECCCCCCCCCCEECCCCCCC APIQNIGAYGVEMSGFCDWVEYVDLRDNNLVQLGGYACQFGYRDSIFKQELLGKVVITRV CCHHHCCCCCEEHHHHHHHHHHEECCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHHH GFKLPKAWAPKLEYGPLQILNCAQVTPKQVFDCICDTRKSKLPDPKDYGNAGSFFKNPVV CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCC DNKQFASLLERYPSIVGYPSVQGKTKVAAGWLIDTAGLKGHQIGGAAVHEKQALVLINKG CCHHHHHHHHHCCHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEECCCEEEEEECC NATSDDVLSLARFVVDKIDEDFGIRLEPEPRMISANGERSL CCCHHHHHHHHHHHHHHCCCCCCCEECCCCCEEECCCCCCC >Mature Secondary Structure PTCQSYSLQPHNTFALAHSCRRLVHASSTDQLVGICRDLYLTKEPMLILGSGSNIILCD CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEE DFEGTVVLVETKGIEVSDDETYYELSVAAGENWHDFVCFCLANGFPGLENLAMIPGTVGA CCCCEEEEEEECCEEECCCCEEEEEEEECCCCHHHHHHEEECCCCCCCCCCEECCCCCCC APIQNIGAYGVEMSGFCDWVEYVDLRDNNLVQLGGYACQFGYRDSIFKQELLGKVVITRV CCHHHCCCCCEEHHHHHHHHHHEECCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHHH GFKLPKAWAPKLEYGPLQILNCAQVTPKQVFDCICDTRKSKLPDPKDYGNAGSFFKNPVV CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCC DNKQFASLLERYPSIVGYPSVQGKTKVAAGWLIDTAGLKGHQIGGAAVHEKQALVLINKG CCHHHHHHHHHCCHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEECCCEEEEEECC NATSDDVLSLARFVVDKIDEDFGIRLEPEPRMISANGERSL CCCHHHHHHHHHHHHHHCCCCCCCEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA