Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is 167623812
Identifier: 167623812
GI number: 167623812
Start: 2260889
End: 2261263
Strand: Direct
Name: 167623812
Synonym: Shal_1882
Alternate gene names: NA
Gene position: 2260889-2261263 (Clockwise)
Preceding gene: 167623811
Following gene: 167623813
Centisome position: 43.25
GC content: 45.33
Gene sequence:
>375_bases ATGCATCGCACCTCAAATATATTATTACTCGCTGCAATAACTGTATTGGCAACACCAGTCTTGGCTGACGAACCTCAGCA GGATATTTTATTAAAAGAAGAGCAAATTGATACAGGACTGAAGAATTTCGGCTATCAGACAGGCTTAGCGCTTGGTTGTG TGGCCGCAGACCAACGCGCACAATTAGAAACCGAGGCTATGAATATCAATAGCGAAATCAGTCGCACTCTGGGGGGCGAC CGAGCGTTTCTCTATGCCGCTAGCTTTGGATACGGCACTAATATTGAACTTAATGTGCAGGAGTGTACTGAAGCGTTGGC AAATTTTGAAAAACGAGCCGCAGCATTTCACCAAGATACGAGAGGCGAGAAATGA
Upstream 100 bases:
>100_bases CGCCATCAGCAAATAATCACTGAAACTTACTCACTTGTTGTGCAGTGCTAAACTTCACCACAAGTATAATTGGACAAAGG TTGGGGATATGGAGAAATTT
Downstream 100 bases:
>100_bases AACAAGGACTAACACTCGCCTTGACGGTATTGCTGGTAACCGGTCTCGGGAGCTTTGATGCCAATGCTGGCCGCTATGAA GTACGCAAAGAGATCCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MHRTSNILLLAAITVLATPVLADEPQQDILLKEEQIDTGLKNFGYQTGLALGCVAADQRAQLETEAMNINSEISRTLGGD RAFLYAASFGYGTNIELNVQECTEALANFEKRAAAFHQDTRGEK
Sequences:
>Translated_124_residues MHRTSNILLLAAITVLATPVLADEPQQDILLKEEQIDTGLKNFGYQTGLALGCVAADQRAQLETEAMNINSEISRTLGGD RAFLYAASFGYGTNIELNVQECTEALANFEKRAAAFHQDTRGEK >Mature_124_residues MHRTSNILLLAAITVLATPVLADEPQQDILLKEEQIDTGLKNFGYQTGLALGCVAADQRAQLETEAMNINSEISRTLGGD RAFLYAASFGYGTNIELNVQECTEALANFEKRAAAFHQDTRGEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13532; Mature: 13532
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRTSNILLLAAITVLATPVLADEPQQDILLKEEQIDTGLKNFGYQTGLALGCVAADQRA CCCCHHHHHHHHHHHHHCCCCCCCCCHHHEECHHHHHHHHHHCCCCCCHHHHHCCCCCHH QLETEAMNINSEISRTLGGDRAFLYAASFGYGTNIELNVQECTEALANFEKRAAAFHQDT HHHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHC RGEK CCCC >Mature Secondary Structure MHRTSNILLLAAITVLATPVLADEPQQDILLKEEQIDTGLKNFGYQTGLALGCVAADQRA CCCCHHHHHHHHHHHHHCCCCCCCCCHHHEECHHHHHHHHHHCCCCCCHHHHHCCCCCHH QLETEAMNINSEISRTLGGDRAFLYAASFGYGTNIELNVQECTEALANFEKRAAAFHQDT HHHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHC RGEK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA