Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623812

Identifier: 167623812

GI number: 167623812

Start: 2260889

End: 2261263

Strand: Direct

Name: 167623812

Synonym: Shal_1882

Alternate gene names: NA

Gene position: 2260889-2261263 (Clockwise)

Preceding gene: 167623811

Following gene: 167623813

Centisome position: 43.25

GC content: 45.33

Gene sequence:

>375_bases
ATGCATCGCACCTCAAATATATTATTACTCGCTGCAATAACTGTATTGGCAACACCAGTCTTGGCTGACGAACCTCAGCA
GGATATTTTATTAAAAGAAGAGCAAATTGATACAGGACTGAAGAATTTCGGCTATCAGACAGGCTTAGCGCTTGGTTGTG
TGGCCGCAGACCAACGCGCACAATTAGAAACCGAGGCTATGAATATCAATAGCGAAATCAGTCGCACTCTGGGGGGCGAC
CGAGCGTTTCTCTATGCCGCTAGCTTTGGATACGGCACTAATATTGAACTTAATGTGCAGGAGTGTACTGAAGCGTTGGC
AAATTTTGAAAAACGAGCCGCAGCATTTCACCAAGATACGAGAGGCGAGAAATGA

Upstream 100 bases:

>100_bases
CGCCATCAGCAAATAATCACTGAAACTTACTCACTTGTTGTGCAGTGCTAAACTTCACCACAAGTATAATTGGACAAAGG
TTGGGGATATGGAGAAATTT

Downstream 100 bases:

>100_bases
AACAAGGACTAACACTCGCCTTGACGGTATTGCTGGTAACCGGTCTCGGGAGCTTTGATGCCAATGCTGGCCGCTATGAA
GTACGCAAAGAGATCCGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MHRTSNILLLAAITVLATPVLADEPQQDILLKEEQIDTGLKNFGYQTGLALGCVAADQRAQLETEAMNINSEISRTLGGD
RAFLYAASFGYGTNIELNVQECTEALANFEKRAAAFHQDTRGEK

Sequences:

>Translated_124_residues
MHRTSNILLLAAITVLATPVLADEPQQDILLKEEQIDTGLKNFGYQTGLALGCVAADQRAQLETEAMNINSEISRTLGGD
RAFLYAASFGYGTNIELNVQECTEALANFEKRAAAFHQDTRGEK
>Mature_124_residues
MHRTSNILLLAAITVLATPVLADEPQQDILLKEEQIDTGLKNFGYQTGLALGCVAADQRAQLETEAMNINSEISRTLGGD
RAFLYAASFGYGTNIELNVQECTEALANFEKRAAAFHQDTRGEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13532; Mature: 13532

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRTSNILLLAAITVLATPVLADEPQQDILLKEEQIDTGLKNFGYQTGLALGCVAADQRA
CCCCHHHHHHHHHHHHHCCCCCCCCCHHHEECHHHHHHHHHHCCCCCCHHHHHCCCCCHH
QLETEAMNINSEISRTLGGDRAFLYAASFGYGTNIELNVQECTEALANFEKRAAAFHQDT
HHHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHC
RGEK
CCCC
>Mature Secondary Structure
MHRTSNILLLAAITVLATPVLADEPQQDILLKEEQIDTGLKNFGYQTGLALGCVAADQRA
CCCCHHHHHHHHHHHHHCCCCCCCCCHHHEECHHHHHHHHHHCCCCCCHHHHHCCCCCHH
QLETEAMNINSEISRTLGGDRAFLYAASFGYGTNIELNVQECTEALANFEKRAAAFHQDT
HHHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHC
RGEK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA