Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is gpt [H]
Identifier: 167623777
GI number: 167623777
Start: 2207268
End: 2207723
Strand: Direct
Name: gpt [H]
Synonym: Shal_1847
Alternate gene names: 167623777
Gene position: 2207268-2207723 (Clockwise)
Preceding gene: 167623776
Following gene: 167623778
Centisome position: 42.23
GC content: 43.42
Gene sequence:
>456_bases ATGAGCAAGAAATTTCTGATCACTTGGGATCAAATGCAAGGTTACACACGTGAGTTGGCTGAACGCCTATTACCAGCAGA GCAATGGAAAGGCATTATTGCTGTTAGCCGCGGCGGTTTAGTACCTGCAGCCATTTTGGCTCGTGAATTAGGAATTCGTC ACGTGGATACGATTTGTATCTCTAGCTACGATCATGATCACCAAAGAGAAACAAGCATTATTAAGCAGGCACCAGGCGAT GGTGAAGGCTTTATTGTGATTGATGATTTAGTTGATAGTGGCTCAACAGCTAAGATCGTACGTGAAATTTACCCTAAGGC AAAGTTTGTCACTGTTTGTGCAAAACCTGCTGGTAAACCACTCGTGGATGATTATATTGTCGATATCCCACAAGACACTT GGATTGAGCAACCTTGGGATACGGGTGTAAGCTTTCAAGCACCGCTTTGTAAGTAA
Upstream 100 bases:
>100_bases TACATCACGAACATATATTTGTATGGTCATGAATAAAAAGCCAAAATGCCGCGCAATCTCTTTCCCCTAAAATAGCGTAT TCGCATAATAAAGGTTGCAC
Downstream 100 bases:
>100_bases TCGCTCAAATTATAGAAACCGAGGCATCGCCTCGGTTTTTTTGTTTCTAATACTAGCCGCTTAGTATTAGATGGTGGATT CTTCCTTCTAAATCGCCGCT
Product: xanthine-guanine phosphoribosyltransferase
Products: NA
Alternate protein names: Xanthine-guanine phosphoribosyltransferase; XGPRT [H]
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSKKFLITWDQMQGYTRELAERLLPAEQWKGIIAVSRGGLVPAAILARELGIRHVDTICISSYDHDHQRETSIIKQAPGD GEGFIVIDDLVDSGSTAKIVREIYPKAKFVTVCAKPAGKPLVDDYIVDIPQDTWIEQPWDTGVSFQAPLCK
Sequences:
>Translated_151_residues MSKKFLITWDQMQGYTRELAERLLPAEQWKGIIAVSRGGLVPAAILARELGIRHVDTICISSYDHDHQRETSIIKQAPGD GEGFIVIDDLVDSGSTAKIVREIYPKAKFVTVCAKPAGKPLVDDYIVDIPQDTWIEQPWDTGVSFQAPLCK >Mature_150_residues SKKFLITWDQMQGYTRELAERLLPAEQWKGIIAVSRGGLVPAAILARELGIRHVDTICISSYDHDHQRETSIIKQAPGDG EGFIVIDDLVDSGSTAKIVREIYPKAKFVTVCAKPAGKPLVDDYIVDIPQDTWIEQPWDTGVSFQAPLCK
Specific function: Acts on guanine, xanthine and to a lesser extent hypoxanthine [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786433, Length=150, Percent_Identity=73.3333333333333, Blast_Score=242, Evalue=7e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.22 [H]
Molecular weight: Translated: 16809; Mature: 16678
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKFLITWDQMQGYTRELAERLLPAEQWKGIIAVSRGGLVPAAILARELGIRHVDTICI CCCCEEEEHHHHCCHHHHHHHHCCCHHHCCCEEEEECCCCCHHHHHHHHHCCHHHHHHEE SSYDHDHQRETSIIKQAPGDGEGFIVIDDLVDSGSTAKIVREIYPKAKFVTVCAKPAGKP CCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC LVDDYIVDIPQDTWIEQPWDTGVSFQAPLCK CCCHHEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKKFLITWDQMQGYTRELAERLLPAEQWKGIIAVSRGGLVPAAILARELGIRHVDTICI CCCEEEEHHHHCCHHHHHHHHCCCHHHCCCEEEEECCCCCHHHHHHHHHCCHHHHHHEE SSYDHDHQRETSIIKQAPGDGEGFIVIDDLVDSGSTAKIVREIYPKAKFVTVCAKPAGKP CCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC LVDDYIVDIPQDTWIEQPWDTGVSFQAPLCK CCCHHEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA