Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is mltB [H]
Identifier: 167623768
GI number: 167623768
Start: 2194367
End: 2195362
Strand: Direct
Name: mltB [H]
Synonym: Shal_1838
Alternate gene names: 167623768
Gene position: 2194367-2195362 (Clockwise)
Preceding gene: 167623767
Following gene: 167623769
Centisome position: 41.98
GC content: 43.17
Gene sequence:
>996_bases ATGGTTTTAGGAAAACAGGTTCTAGCACTGGTTTGTTGTTTGAGTTTGTTACCAGTAGTTGCTTTCGCAGAAAGTGAGCC TAAAGCTCATTTCAGTGATTATGTCGTGTCTCTAAAACAAGAGGCGCTAGATAAAGGCGTTAGTCTGCAAACTGTTAACG ATGTTTTTCCAAAAATTAAGATGTTTAAAAAAGCGTTGGCTTCAGATAAAAACCAGCCTGAAAACCAAGTTACCCTAGAA ACCTACCTACCAAAAGTCGTGCCGCAATCTAAAGTAGATACGGCGCGGGCTTTATACAAACAACATTACCCTGAGCTTGA GAAGATAGGTAAACGCTATGGCGTGCAGCCGCGCTTCATAGTGGCGCTGTGGGGAGTCGAGTCTAACTTCGGTCAGTATG GTGGGGATTACCCTATTTTATCGGTAACCGCGTCTTTAGCCTATGAAGGTCGACGAGAAGCCTTTTTCCGTGAAGAGTTT TTTGCCGCATTAAAAATTGCGGAAAGGGAAGGCATTGCATTTTCTGAGCTCAAAGGCTCATGGGCCGGTGCAATGGGACA AACACAATTTATGCCAAGCTCCTATCTTACTTATGCGCAAGATGGTGATGGTGACGGTAAGAAAGATATCTGGACGAATA CTAGTGATGTATTTGCATCGTTGGCTTATTATCTTCAGCAAACAGGCTGGAAAGCGTCTGAAACTTGGGGAAGGCAGGTT CGAGTACCTAAGTCATTCGAAACAGACTTGGCAGACTTAAAAACAAAGAAAAGTTTTAATCAGTGGCAAGAACTGGGAGT CAGGCGTTTTGATGGTAGTAACTTACCGAAACGCGATGATATGCAAGTTTCTATGGTCATGCCAGACGGGATCATGGGGC GAAAGTATTTGGTTTATGATAACTATCGCAGCTTGCTTCGCTGGAATAACTCAGATTACTTTGCCATTACCGTGGCTCAT CTTTCAGAGAGGATTAAATATCCAGCAGTGATTTAA
Upstream 100 bases:
>100_bases CCTCCTGTGGTTAATTTATTAGAACAGCATAAGAAAGAGATCGGTTTTAATCCTGATTAAAACAGGATTAGCACAGAAAA GGTGTAACAAGAGGGAATTT
Downstream 100 bases:
>100_bases CTTGGATAAAAACAGGTGTTATAGCAATACTGTTAATTTAAGCTTTTCGGTACGCTTCAGTTTTGTCCGCTAGAGTCACA AATCTTATTAATAATTTCAC
Product: lytic murein transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MVLGKQVLALVCCLSLLPVVAFAESEPKAHFSDYVVSLKQEALDKGVSLQTVNDVFPKIKMFKKALASDKNQPENQVTLE TYLPKVVPQSKVDTARALYKQHYPELEKIGKRYGVQPRFIVALWGVESNFGQYGGDYPILSVTASLAYEGRREAFFREEF FAALKIAEREGIAFSELKGSWAGAMGQTQFMPSSYLTYAQDGDGDGKKDIWTNTSDVFASLAYYLQQTGWKASETWGRQV RVPKSFETDLADLKTKKSFNQWQELGVRRFDGSNLPKRDDMQVSMVMPDGIMGRKYLVYDNYRSLLRWNNSDYFAITVAH LSERIKYPAVI
Sequences:
>Translated_331_residues MVLGKQVLALVCCLSLLPVVAFAESEPKAHFSDYVVSLKQEALDKGVSLQTVNDVFPKIKMFKKALASDKNQPENQVTLE TYLPKVVPQSKVDTARALYKQHYPELEKIGKRYGVQPRFIVALWGVESNFGQYGGDYPILSVTASLAYEGRREAFFREEF FAALKIAEREGIAFSELKGSWAGAMGQTQFMPSSYLTYAQDGDGDGKKDIWTNTSDVFASLAYYLQQTGWKASETWGRQV RVPKSFETDLADLKTKKSFNQWQELGVRRFDGSNLPKRDDMQVSMVMPDGIMGRKYLVYDNYRSLLRWNNSDYFAITVAH LSERIKYPAVI >Mature_331_residues MVLGKQVLALVCCLSLLPVVAFAESEPKAHFSDYVVSLKQEALDKGVSLQTVNDVFPKIKMFKKALASDKNQPENQVTLE TYLPKVVPQSKVDTARALYKQHYPELEKIGKRYGVQPRFIVALWGVESNFGQYGGDYPILSVTASLAYEGRREAFFREEF FAALKIAEREGIAFSELKGSWAGAMGQTQFMPSSYLTYAQDGDGDGKKDIWTNTSDVFASLAYYLQQTGWKASETWGRQV RVPKSFETDLADLKTKKSFNQWQELGVRRFDGSNLPKRDDMQVSMVMPDGIMGRKYLVYDNYRSLLRWNNSDYFAITVAH LSERIKYPAVI
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=320, Percent_Identity=28.4375, Blast_Score=101, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 37539; Mature: 37539
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLGKQVLALVCCLSLLPVVAFAESEPKAHFSDYVVSLKQEALDKGVSLQTVNDVFPKIK CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHH MFKKALASDKNQPENQVTLETYLPKVVPQSKVDTARALYKQHYPELEKIGKRYGVQPRFI HHHHHHHCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEE VALWGVESNFGQYGGDYPILSVTASLAYEGRREAFFREEFFAALKIAEREGIAFSELKGS EEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC WAGAMGQTQFMPSSYLTYAQDGDGDGKKDIWTNTSDVFASLAYYLQQTGWKASETWGRQV HHCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCEE RVPKSFETDLADLKTKKSFNQWQELGVRRFDGSNLPKRDDMQVSMVMPDGIMGRKYLVYD ECCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEC NYRSLLRWNNSDYFAITVAHLSERIKYPAVI CHHHHHEECCCCEEEEEHHHHHHHCCCCCCC >Mature Secondary Structure MVLGKQVLALVCCLSLLPVVAFAESEPKAHFSDYVVSLKQEALDKGVSLQTVNDVFPKIK CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHH MFKKALASDKNQPENQVTLETYLPKVVPQSKVDTARALYKQHYPELEKIGKRYGVQPRFI HHHHHHHCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEE VALWGVESNFGQYGGDYPILSVTASLAYEGRREAFFREEFFAALKIAEREGIAFSELKGS EEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC WAGAMGQTQFMPSSYLTYAQDGDGDGKKDIWTNTSDVFASLAYYLQQTGWKASETWGRQV HHCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCEE RVPKSFETDLADLKTKKSFNQWQELGVRRFDGSNLPKRDDMQVSMVMPDGIMGRKYLVYD ECCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEC NYRSLLRWNNSDYFAITVAHLSERIKYPAVI CHHHHHEECCCCEEEEEHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]