Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is fabH [H]
Identifier: 167623705
GI number: 167623705
Start: 2126624
End: 2127583
Strand: Direct
Name: fabH [H]
Synonym: Shal_1775
Alternate gene names: 167623705
Gene position: 2126624-2127583 (Clockwise)
Preceding gene: 167623704
Following gene: 167623706
Centisome position: 40.69
GC content: 45.1
Gene sequence:
>960_bases ATGCATACAAAAATTCTTGGTACTGGTAGTTATCTACCGGTGCAGGTGCGTAGTAATCTCGATCTAGAAAAGATGGTTGA GACAACTGATCAATGGATCGTAGAACGTACTGGTATTTCAGAACGTAGAATCGCCGCGGCGGACGAAACTGTTGCCACCA TGGGCTATCAAGCTGCGTTAAAAGCCATTGAAATGGCAGGTATCGAAGCCTCTGAAATCGACATGATCGTGTGCGGTACA ACGAGCGCAAGTAATGCGTTTCCTGCCGCAGCATGTGAAATACAAGCCATGCTAGGCATTCATACTATTCCAGCATTTGA TATTGCAGCGGCCTGTTCTGGTTTCGTTTACGCCTTGTCTATTGCCGATCAGTATGTAAAGTCAGGCGCAGCTAAAAATG TGTTAGTGATAGGTGCAGATGTACTTTCACGACTGTGTGAGCCAGAAGATCGCTCCACAATTATTCTATTTGGTGATGGT GCCGGTGCCGCCGTTGTTGGCGCATCAACAGAGCCGGGAATTATCTCTACTCATATTTTCGCCGATGGTCGCCAAGGTGA TTTGCTAAAATGTTCTATACCGCCACGCAAAGGAGAAACTTCTGAAGCTGTGGGTTATATGACAATGAAAGGCAACGATG TATTTAAAGTTGCTGTGACTCAGTTATCTCATGTCGTGACAGAAACCCTGCGTCATAACAATATTGATAAATCAGAAATC GACTGGTTAGTTCCGCACCAGGCGAACTTTAGGATCATTAAAGCAACGGCGAAAAAACTTGATATGAGTTTAGATAAAGT CGTGTTAACACTGGCTAAGCACGGTAATACGTCTGCAGCTTCAGTGCCTATTGCGTTAGACGAAGCGGTTAGAGATGGAC GTATTCAACGTGGCCAAATGTTGCTACTAGAAGCCTTCGGCGCAGGTTTTGCCTGGGGAAGTGCTTTAGTTCGTTTTTAA
Upstream 100 bases:
>100_bases ATTACTTTGGCAGTAACCGAAGCGCAACGTCGACTCCCACAGATGATTGAAGATCGTCTAGAGTCGATTCTTTTAGACAT TAATAGCTGATAAATTCCTT
Downstream 100 bases:
>100_bases TCGTCTTAGATAAAGTCATAGATATAGTCTTTGATAAAGTCTTATTGATAACAGTCAAAAGATGTTGATTTAAAAGGGTG AAAAATATGGAAAATACTGC
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MHTKILGTGSYLPVQVRSNLDLEKMVETTDQWIVERTGISERRIAAADETVATMGYQAALKAIEMAGIEASEIDMIVCGT TSASNAFPAAACEIQAMLGIHTIPAFDIAAACSGFVYALSIADQYVKSGAAKNVLVIGADVLSRLCEPEDRSTIILFGDG AGAAVVGASTEPGIISTHIFADGRQGDLLKCSIPPRKGETSEAVGYMTMKGNDVFKVAVTQLSHVVTETLRHNNIDKSEI DWLVPHQANFRIIKATAKKLDMSLDKVVLTLAKHGNTSAASVPIALDEAVRDGRIQRGQMLLLEAFGAGFAWGSALVRF
Sequences:
>Translated_319_residues MHTKILGTGSYLPVQVRSNLDLEKMVETTDQWIVERTGISERRIAAADETVATMGYQAALKAIEMAGIEASEIDMIVCGT TSASNAFPAAACEIQAMLGIHTIPAFDIAAACSGFVYALSIADQYVKSGAAKNVLVIGADVLSRLCEPEDRSTIILFGDG AGAAVVGASTEPGIISTHIFADGRQGDLLKCSIPPRKGETSEAVGYMTMKGNDVFKVAVTQLSHVVTETLRHNNIDKSEI DWLVPHQANFRIIKATAKKLDMSLDKVVLTLAKHGNTSAASVPIALDEAVRDGRIQRGQMLLLEAFGAGFAWGSALVRF >Mature_319_residues MHTKILGTGSYLPVQVRSNLDLEKMVETTDQWIVERTGISERRIAAADETVATMGYQAALKAIEMAGIEASEIDMIVCGT TSASNAFPAAACEIQAMLGIHTIPAFDIAAACSGFVYALSIADQYVKSGAAKNVLVIGADVLSRLCEPEDRSTIILFGDG AGAAVVGASTEPGIISTHIFADGRQGDLLKCSIPPRKGETSEAVGYMTMKGNDVFKVAVTQLSHVVTETLRHNNIDKSEI DWLVPHQANFRIIKATAKKLDMSLDKVVLTLAKHGNTSAASVPIALDEAVRDGRIQRGQMLLLEAFGAGFAWGSALVRF
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=319, Percent_Identity=68.9655172413793, Blast_Score=459, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 33966; Mature: 33966
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTKILGTGSYLPVQVRSNLDLEKMVETTDQWIVERTGISERRIAAADETVATMGYQAAL CCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHEEECCCHHHHHHHHHHHH KAIEMAGIEASEIDMIVCGTTSASNAFPAAACEIQAMLGIHTIPAFDIAAACSGFVYALS HHHHHCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IADQYVKSGAAKNVLVIGADVLSRLCEPEDRSTIILFGDGAGAAVVGASTEPGIISTHIF HHHHHHHCCCCCCEEEECHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCEEEEEEE ADGRQGDLLKCSIPPRKGETSEAVGYMTMKGNDVFKVAVTQLSHVVTETLRHNNIDKSEI ECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCHHHC DWLVPHQANFRIIKATAKKLDMSLDKVVLTLAKHGNTSAASVPIALDEAVRDGRIQRGQM CEECCCCCCCEEEEEHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHCCCCCCCCE LLLEAFGAGFAWGSALVRF EEEEHHCCCHHHHHHHHCC >Mature Secondary Structure MHTKILGTGSYLPVQVRSNLDLEKMVETTDQWIVERTGISERRIAAADETVATMGYQAAL CCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHEEECCCHHHHHHHHHHHH KAIEMAGIEASEIDMIVCGTTSASNAFPAAACEIQAMLGIHTIPAFDIAAACSGFVYALS HHHHHCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IADQYVKSGAAKNVLVIGADVLSRLCEPEDRSTIILFGDGAGAAVVGASTEPGIISTHIF HHHHHHHCCCCCCEEEECHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCEEEEEEE ADGRQGDLLKCSIPPRKGETSEAVGYMTMKGNDVFKVAVTQLSHVVTETLRHNNIDKSEI ECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCHHHC DWLVPHQANFRIIKATAKKLDMSLDKVVLTLAKHGNTSAASVPIALDEAVRDGRIQRGQM CEECCCCCCCEEEEEHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHCCCCCCCCE LLLEAFGAGFAWGSALVRF EEEEHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]