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The map label for this gene is ycfJ [C]

Identifier: 167623656

GI number: 167623656

Start: 2068692

End: 2069168

Strand: Direct

Name: ycfJ [C]

Synonym: Shal_1725

Alternate gene names: 167623656

Gene position: 2068692-2069168 (Clockwise)

Preceding gene: 167623652

Following gene: 167623658

Centisome position: 39.58

GC content: 46.54

Gene sequence:

>477_bases
ATGTTGAAACCTCATCTTATTGTTTTCACGGTTATCTGTTTATTTTTTGGTACGCAGACCGCATTTGCTGCACCTTATGA
TCGCAATCAAGCGGTCCCCGTTGAAAAGGTGGAGTTTGGTCAAGTCGCTTCTGTACGCAATATTACCCAAAAGCAGCTGG
TTGAAGATAGAAATACCGGCTGGAAGACGTTTGGTGGTGCGCTGATTGGTGGTGTGATTGGTCACCAATTTGGTGGCGGC
TCAGGTCAAGATGTTGCCACGGTTCTGGGGGCATTACTGGGTGCTGGAGTCGGTAATCGTTACGGAGATAGCTCTTACTA
TGAAGAGCTACGATTGGTTGAAATGATGATTACCTTAGACTCTGGCGAGCAGGTTATGGTGATCCAAGACTTAGATCCCG
GCATGATCTTCAGTGTGAATGACGATGTGCGAGTCGTTTATCTACAAGGCTATGTTCGAGTCGATCAGCAGATGTAA

Upstream 100 bases:

>100_bases
GCGGGAAACCTTGTTGATCATGATTTAAATAGGACAGTGAGTTCACAATTGAGTAAGATTAATAAATATACTTATCCTTA
AAGTTAGCGGAAAAAGTCTT

Downstream 100 bases:

>100_bases
CGATGGGGCTTGGATTCACTTTAGAATGGACTGTAAAAGTCGACAAAAAAGCCGCCAATTCAGTGGTTTTTTTGTGTCAA
TTTTGCCTTTGGCTTAAGTT

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Lipoprotein; Surface Antigen

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MLKPHLIVFTVICLFFGTQTAFAAPYDRNQAVPVEKVEFGQVASVRNITQKQLVEDRNTGWKTFGGALIGGVIGHQFGGG
SGQDVATVLGALLGAGVGNRYGDSSYYEELRLVEMMITLDSGEQVMVIQDLDPGMIFSVNDDVRVVYLQGYVRVDQQM

Sequences:

>Translated_158_residues
MLKPHLIVFTVICLFFGTQTAFAAPYDRNQAVPVEKVEFGQVASVRNITQKQLVEDRNTGWKTFGGALIGGVIGHQFGGG
SGQDVATVLGALLGAGVGNRYGDSSYYEELRLVEMMITLDSGEQVMVIQDLDPGMIFSVNDDVRVVYLQGYVRVDQQM
>Mature_158_residues
MLKPHLIVFTVICLFFGTQTAFAAPYDRNQAVPVEKVEFGQVASVRNITQKQLVEDRNTGWKTFGGALIGGVIGHQFGGG
SGQDVATVLGALLGAGVGNRYGDSSYYEELRLVEMMITLDSGEQVMVIQDLDPGMIFSVNDDVRVVYLQGYVRVDQQM

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17253; Mature: 17253

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPHLIVFTVICLFFGTQTAFAAPYDRNQAVPVEKVEFGQVASVRNITQKQLVEDRNTG
CCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
WKTFGGALIGGVIGHQFGGGSGQDVATVLGALLGAGVGNRYGDSSYYEELRLVEMMITLD
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEC
SGEQVMVIQDLDPGMIFSVNDDVRVVYLQGYVRVDQQM
CCCEEEEEEECCCCEEEEECCCEEEEEEEEEEEECCCC
>Mature Secondary Structure
MLKPHLIVFTVICLFFGTQTAFAAPYDRNQAVPVEKVEFGQVASVRNITQKQLVEDRNTG
CCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
WKTFGGALIGGVIGHQFGGGSGQDVATVLGALLGAGVGNRYGDSSYYEELRLVEMMITLD
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEC
SGEQVMVIQDLDPGMIFSVNDDVRVVYLQGYVRVDQQM
CCCEEEEEEECCCCEEEEECCCEEEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA