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The map label for this gene is tolR [H]

Identifier: 167623620

GI number: 167623620

Start: 2024938

End: 2025375

Strand: Direct

Name: tolR [H]

Synonym: Shal_1689

Alternate gene names: 167623620

Gene position: 2024938-2025375 (Clockwise)

Preceding gene: 167623619

Following gene: 167623621

Centisome position: 38.74

GC content: 48.63

Gene sequence:

>438_bases
ATGCATCAAGGCTACCAAAGGAAGCGCCGTCGTCCCGTCGCTGAAATTAACGTGGTGCCCTATATCGATGTGATGTTGGT
ACTGCTGATTATCTTCATGGTGACTGCGCCGATTGTTACCCAGGGGGTGAAAGTCGATTTGCCTCAAGGACAAGCCGAAT
CTTTACCAGCAGATAGTAAACCTCCTGTCGTTGCATCGATTGATGCCATGGGTGAGTATTACTTAGATGTTGGTAGCTCT
AGCACTAAAGAGGTTCTAGAGTTGGAAGACGTCGCAGTGCGTGTTGGCGCGATTATTCAGCTAGAACCTGAGCGCCCAGT
TGTAGTTAAAGCCGATCGCTCAATCCCTTATGAAAAAGTGATCCAGTTGATGGTGACACTGCAAGGTGCTGGTGTGCCGT
CAGTGGGGTTAATGACTGATTCGCCGGAGGATAAATAA

Upstream 100 bases:

>100_bases
CAACCCAAGTTGAAAAGATTGAAATGTCTTATGCCAACTTTATGGAAGAGTTCTCAAGCATTTTGCATCGCCAAGCATAC
AGCGAGAAGGAACAGGCATA

Downstream 100 bases:

>100_bases
GTGGCGGCTAAATCAGATTTAACCCTTCCGGTTGCAATTTCAGCTGGAATTCATATTGGCGTGATAATTATTCTCATTTT
AGGCGTGGATTTTTCAGAAA

Product: biopolymer transport TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MHQGYQRKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQGVKVDLPQGQAESLPADSKPPVVASIDAMGEYYLDVGSS
STKEVLELEDVAVRVGAIIQLEPERPVVVKADRSIPYEKVIQLMVTLQGAGVPSVGLMTDSPEDK

Sequences:

>Translated_145_residues
MHQGYQRKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQGVKVDLPQGQAESLPADSKPPVVASIDAMGEYYLDVGSS
STKEVLELEDVAVRVGAIIQLEPERPVVVKADRSIPYEKVIQLMVTLQGAGVPSVGLMTDSPEDK
>Mature_145_residues
MHQGYQRKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQGVKVDLPQGQAESLPADSKPPVVASIDAMGEYYLDVGSS
STKEVLELEDVAVRVGAIIQLEPERPVVVKADRSIPYEKVIQLMVTLQGAGVPSVGLMTDSPEDK

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=137, Percent_Identity=34.3065693430657, Blast_Score=77, Evalue=3e-16,
Organism=Escherichia coli, GI1786959, Length=127, Percent_Identity=39.3700787401575, Blast_Score=73, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15811; Mature: 15811

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQGYQRKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQGVKVDLPQGQAESLPADSK
CCCCHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC
PPVVASIDAMGEYYLDVGSSSTKEVLELEDVAVRVGAIIQLEPERPVVVKADRSIPYEKV
CCEEEEHHHCCCEEEECCCCCHHHHHHHHHHHHEECEEEEECCCCCEEEEECCCCCHHHH
IQLMVTLQGAGVPSVGLMTDSPEDK
HHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHQGYQRKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQGVKVDLPQGQAESLPADSK
CCCCHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC
PPVVASIDAMGEYYLDVGSSSTKEVLELEDVAVRVGAIIQLEPERPVVVKADRSIPYEKV
CCEEEEHHHCCCEEEECCCCCHHHHHHHHHHHHEECEEEEECCCCCEEEEECCCCCHHHH
IQLMVTLQGAGVPSVGLMTDSPEDK
HHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]