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The map label for this gene is 167623603

Identifier: 167623603

GI number: 167623603

Start: 2002518

End: 2002862

Strand: Direct

Name: 167623603

Synonym: Shal_1672

Alternate gene names: NA

Gene position: 2002518-2002862 (Clockwise)

Preceding gene: 167623602

Following gene: 167623607

Centisome position: 38.31

GC content: 42.9

Gene sequence:

>345_bases
ATGCCCCATTGTACGATTGAATATTCTGCGCCATTAACCGATGTGTTATCGATTGAGGCTTTAGTTGCAGCCTGCCATAG
AGGCTTAACTGAATCAGAGCTGTTTGAGCCTCAGGCTATCAAAACCCGTGCACATCGCTGTGAATTTTTCAAAGTGGGCG
AGTCTAATGAGGCAAGTTTCATCCATCTCAATATTGCTATCATGCCGGGTCGCAGCGATGAGCAAAAATCTCTGCTACTT
GAGCGAGTGTATAATGCGATCTCATTGATTACTGCGACTGTGACTAGCGTAACTATAGAGGTGATAGATATAAAACAGCA
GCATTATTTTAAGGCTCTAAATTGA

Upstream 100 bases:

>100_bases
GGACGTAGATTCCACTTTCTCGATCCTAATGGTAATGAATATGCCGTCTGGTCTGAATAAGCTCCTATCTTTTCCTTATC
ACTAGCAACGAGAGCTGCCT

Downstream 100 bases:

>100_bases
TTGCAACGCCAGGTTTGAGCAAATTACCGGAGTTTATTGGTTAACGTATTTAATCCTCGAACATGCTCATTTCGAAAACG
AAAATAGCCACTCAAATGAG

Product: 5-carboxymethyl-2-hydroxymuconate isomerase

Products: 5-carboxy-2-oxohept-3-enedioate

Alternate protein names: 5-Carboxymethyl-2-Hydroxymuconate D-Isomerase; 5-Carboxymethyl-2-Hydroxymuconate Delta Isomerase; 5-Carboxymethyl-2-Hydroxymuconate Delta-Isomerase

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MPHCTIEYSAPLTDVLSIEALVAACHRGLTESELFEPQAIKTRAHRCEFFKVGESNEASFIHLNIAIMPGRSDEQKSLLL
ERVYNAISLITATVTSVTIEVIDIKQQHYFKALN

Sequences:

>Translated_114_residues
MPHCTIEYSAPLTDVLSIEALVAACHRGLTESELFEPQAIKTRAHRCEFFKVGESNEASFIHLNIAIMPGRSDEQKSLLL
ERVYNAISLITATVTSVTIEVIDIKQQHYFKALN
>Mature_113_residues
PHCTIEYSAPLTDVLSIEALVAACHRGLTESELFEPQAIKTRAHRCEFFKVGESNEASFIHLNIAIMPGRSDEQKSLLLE
RVYNAISLITATVTSVTIEVIDIKQQHYFKALN

Specific function: Unknown

COG id: COG3232

COG function: function code E; 5-carboxymethyl-2-hydroxymuconate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.3.3.10

Molecular weight: Translated: 12775; Mature: 12644

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHCTIEYSAPLTDVLSIEALVAACHRGLTESELFEPQAIKTRAHRCEFFKVGESNEASF
CCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCEEEECCCCCCCEE
IHLNIAIMPGRSDEQKSLLLERVYNAISLITATVTSVTIEVIDIKQQHYFKALN
EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHCCCC
>Mature Secondary Structure 
PHCTIEYSAPLTDVLSIEALVAACHRGLTESELFEPQAIKTRAHRCEFFKVGESNEASF
CCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCEEEECCCCCCCEE
IHLNIAIMPGRSDEQKSLLLERVYNAISLITATVTSVTIEVIDIKQQHYFKALN
EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 5-carboxymethyl-2-hydroxymuconate

Specific reaction: 5-carboxymethyl-2-hydroxymuconate = 5-carboxy-2-oxohept-3-enedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA