Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is 167623583
Identifier: 167623583
GI number: 167623583
Start: 1981125
End: 1982930
Strand: Direct
Name: 167623583
Synonym: Shal_1652
Alternate gene names: NA
Gene position: 1981125-1982930 (Clockwise)
Preceding gene: 167623582
Following gene: 167623590
Centisome position: 37.9
GC content: 48.17
Gene sequence:
>1806_bases ATGTCTAAACCCTCTTTACTGCTACCTGCGTTAGCCTTATCTCTTAGTCTATGTAGCGTCCATGTTGCAGCGTCTATTGA TGGCATGAAGCCTAAGCCTGTCGAAGGCGCCCCATTAGGGTATATTATTCATAATCCTTATGAAAATGCGCCGCTAACGG CCTTAGTGACCCTAGCCGGGCACACCATTTCAGCGGTTGAAGTCACCGTGCATGCCAATGATGAAGATGGCGTGAGCTTG ACTTATCAAGTCGATGATATGCGCGTGATGGATGAGGGCGGCGTGCCCATTTTTGGTCTCTATCCAGCGTTTATGAATCA GTTTACCGTTAAGTGGACTGAGAACGGCGAGCGTAAATCTCACAATTATAAAATGCTAACGCCCGATATCGATATGGGTT TTTCAGAAAGTCAGTGGGCTAAGGCACCCTTGGTTGAAGTTGAGCATGTCGATGCTGATTTTAAAGACAGATTGTACTTT GTTAACTGGACTAACGCCGACGGTAAAGCCGCGCCGCTGATGCATAACAATGCTGATGCGCCAGGTGCATTTTCGTGGGA CGGTAAACCGGGCTTCTTCATTATCGATACCGCGGGCGATATTCGCTGGTATATGAACCCCTATACCACTCATGATGCAA AAAGCTTTGACAGTGCGGGTTATGCTATGGGCATGAACGTGACTAAAGATGGCAACATGGTGTGGGTGCAAGGCCAAGGC TGGAAGAAGATGTCGATTATGGGACGGATGATCTCAGAGCATAATCTGCCGGGTAACTTTATCGATGCCTCTCACGAAGG CATCGAGGGCGCCAACGGAAACGTGTTTATTCGCGCCGCTGCCAAAGACTACCGTACTTCAGATGGCCGCTTGGTCAATA CGATTCGCGATCAAATTATCGAGGTGGATAACACAGGTAAGCTGGTGGACTATTGGGATCTAAACACTATCTTAGATCCA ATGCGTGACGCGGCATTACTGTCACTTGATGCGGGCGCGGTCTGTTTAAATATTAATCTTGACGATGCGGGCCATCAAAC CACCGAGGAAGACTTGGCCAACGCGCCTTATGGTGATATTCACGGCGTGGCAACGGGTCGCAACTGGGCTCATGTTAACT CAATCGAGTACGATCCAAAGGACGACAGCATCATCATTAGCTCGCGCCATCAATCGGCGGTGATCAAGATTGGCCGTGAT AAACAGGTTAAGTGGATCTTAAGTGCTAGCAAAGGCTGGAGCGAGAAGTTTCAAGATAAATTGCTTAAACCTATTACGCC AGATGGTGAGCCAATTTGGTGTAACGAGAAGGGCGCATGTCAGGATAAAGATTTTGACTTTAGCTGGACATCACACACCG CCTACTTAGTGCCAGAGAAAGGTACCCTAACCGTGTTTGATAACGGCGATGGTCGCGATCTCGGCCAGCCTATGTTTGCT ACTGAGAAGTACTCACGTTCGGTGGAATATAAAATCGATGAGCAGAACATGACGGTGCTGCAAGTCTGGGAATACGGTAA GGATGAGCTTGGCTATGAAGGTTACTCACCCGTGACCTCTATCGTTAAATATCAAGCCGATAAAGACAGCATGATGAGCT ACTTTGCCTCAGCCGGTCTATTTGGTCTAGGCGGCGGTTACGGTAACCTGAAGATGGATGACACCACAGGTAAGGTGCAA TCAATTCTGGTTGAGCATCGATATGGTGAAACTGAGCCTGCTGTACGCATTAATATCGATAGCCACGATATGTTTGCCAC CGGTTATCGCGCTCAGGTTATTCGCGTCAATGAGATGCTTAAGTAG
Upstream 100 bases:
>100_bases TCGAAATAAACTCGCTAGATTGTTAATTACCTGACATTTTTCATTGTGTTTGCTGATTATAATCCACCTCAGTTTTTGAC TCGCTGAGAATATCAATTAA
Downstream 100 bases:
>100_bases TTAATAAGTCATTGATTAAGAATATTCGATGACGGATCAACCAAAAAAATAGCGCCCTAGGCGCTATTTTTTTATCTGTC GTTCGACTACTTAGCGAGAC
Product: arylsulfotransferase
Products: NA
Alternate protein names: Arylsulfate Sulfotransferase; Fructose-Bisphosphate Aldolase; Outer Membrane Protein; Arylsulfate Sulfotransferase Degenerate; Sulfatase; Arylsulfatase
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MSKPSLLLPALALSLSLCSVHVAASIDGMKPKPVEGAPLGYIIHNPYENAPLTALVTLAGHTISAVEVTVHANDEDGVSL TYQVDDMRVMDEGGVPIFGLYPAFMNQFTVKWTENGERKSHNYKMLTPDIDMGFSESQWAKAPLVEVEHVDADFKDRLYF VNWTNADGKAAPLMHNNADAPGAFSWDGKPGFFIIDTAGDIRWYMNPYTTHDAKSFDSAGYAMGMNVTKDGNMVWVQGQG WKKMSIMGRMISEHNLPGNFIDASHEGIEGANGNVFIRAAAKDYRTSDGRLVNTIRDQIIEVDNTGKLVDYWDLNTILDP MRDAALLSLDAGAVCLNINLDDAGHQTTEEDLANAPYGDIHGVATGRNWAHVNSIEYDPKDDSIIISSRHQSAVIKIGRD KQVKWILSASKGWSEKFQDKLLKPITPDGEPIWCNEKGACQDKDFDFSWTSHTAYLVPEKGTLTVFDNGDGRDLGQPMFA TEKYSRSVEYKIDEQNMTVLQVWEYGKDELGYEGYSPVTSIVKYQADKDSMMSYFASAGLFGLGGGYGNLKMDDTTGKVQ SILVEHRYGETEPAVRINIDSHDMFATGYRAQVIRVNEMLK
Sequences:
>Translated_601_residues MSKPSLLLPALALSLSLCSVHVAASIDGMKPKPVEGAPLGYIIHNPYENAPLTALVTLAGHTISAVEVTVHANDEDGVSL TYQVDDMRVMDEGGVPIFGLYPAFMNQFTVKWTENGERKSHNYKMLTPDIDMGFSESQWAKAPLVEVEHVDADFKDRLYF VNWTNADGKAAPLMHNNADAPGAFSWDGKPGFFIIDTAGDIRWYMNPYTTHDAKSFDSAGYAMGMNVTKDGNMVWVQGQG WKKMSIMGRMISEHNLPGNFIDASHEGIEGANGNVFIRAAAKDYRTSDGRLVNTIRDQIIEVDNTGKLVDYWDLNTILDP MRDAALLSLDAGAVCLNINLDDAGHQTTEEDLANAPYGDIHGVATGRNWAHVNSIEYDPKDDSIIISSRHQSAVIKIGRD KQVKWILSASKGWSEKFQDKLLKPITPDGEPIWCNEKGACQDKDFDFSWTSHTAYLVPEKGTLTVFDNGDGRDLGQPMFA TEKYSRSVEYKIDEQNMTVLQVWEYGKDELGYEGYSPVTSIVKYQADKDSMMSYFASAGLFGLGGGYGNLKMDDTTGKVQ SILVEHRYGETEPAVRINIDSHDMFATGYRAQVIRVNEMLK >Mature_600_residues SKPSLLLPALALSLSLCSVHVAASIDGMKPKPVEGAPLGYIIHNPYENAPLTALVTLAGHTISAVEVTVHANDEDGVSLT YQVDDMRVMDEGGVPIFGLYPAFMNQFTVKWTENGERKSHNYKMLTPDIDMGFSESQWAKAPLVEVEHVDADFKDRLYFV NWTNADGKAAPLMHNNADAPGAFSWDGKPGFFIIDTAGDIRWYMNPYTTHDAKSFDSAGYAMGMNVTKDGNMVWVQGQGW KKMSIMGRMISEHNLPGNFIDASHEGIEGANGNVFIRAAAKDYRTSDGRLVNTIRDQIIEVDNTGKLVDYWDLNTILDPM RDAALLSLDAGAVCLNINLDDAGHQTTEEDLANAPYGDIHGVATGRNWAHVNSIEYDPKDDSIIISSRHQSAVIKIGRDK QVKWILSASKGWSEKFQDKLLKPITPDGEPIWCNEKGACQDKDFDFSWTSHTAYLVPEKGTLTVFDNGDGRDLGQPMFAT EKYSRSVEYKIDEQNMTVLQVWEYGKDELGYEGYSPVTSIVKYQADKDSMMSYFASAGLFGLGGGYGNLKMDDTTGKVQS ILVEHRYGETEPAVRINIDSHDMFATGYRAQVIRVNEMLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66602; Mature: 66471
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPSLLLPALALSLSLCSVHVAASIDGMKPKPVEGAPLGYIIHNPYENAPLTALVTLAG CCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECC HTISAVEVTVHANDEDGVSLTYQVDDMRVMDEGGVPIFGLYPAFMNQFTVKWTENGERKS CEEEEEEEEEEECCCCCEEEEEEECCEEEEECCCCEEEEECHHHHCCEEEEECCCCCCCC HNYKMLTPDIDMGFSESQWAKAPLVEVEHVDADFKDRLYFVNWTNADGKAAPLMHNNADA CCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEECCCCCC PGAFSWDGKPGFFIIDTAGDIRWYMNPYTTHDAKSFDSAGYAMGMNVTKDGNMVWVQGQG CCEEECCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECEEECCCCEEEEECCC WKKMSIMGRMISEHNLPGNFIDASHEGIEGANGNVFIRAAAKDYRTSDGRLVNTIRDQII CCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHEE EVDNTGKLVDYWDLNTILDPMRDAALLSLDAGAVCLNINLDDAGHQTTEEDLANAPYGDI EECCCCCEEEEECCHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHCCCCCCE HGVATGRNWAHVNSIEYDPKDDSIIISSRHQSAVIKIGRDKQVKWILSASKGWSEKFQDK EEEECCCCEEEECCEECCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCHHHHHHH LLKPITPDGEPIWCNEKGACQDKDFDFSWTSHTAYLVPEKGTLTVFDNGDGRDLGQPMFA HCCCCCCCCCEEEECCCCCCCCCCCCEEECCCEEEEEECCCEEEEEECCCCCCCCCCCHH TEKYSRSVEYKIDEQNMTVLQVWEYGKDELGYEGYSPVTSIVKYQADKDSMMSYFASAGL HHHHCCCEEEEECCCCCEEEEEEECCCHHCCCCCCCHHHHHHEECCCHHHHHHHHHHCCC FGLGGGYGNLKMDDTTGKVQSILVEHRYGETEPAVRINIDSHDMFATGYRAQVIRVNEML EECCCCCCCEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCEEEEEEECHHC K C >Mature Secondary Structure SKPSLLLPALALSLSLCSVHVAASIDGMKPKPVEGAPLGYIIHNPYENAPLTALVTLAG CCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECC HTISAVEVTVHANDEDGVSLTYQVDDMRVMDEGGVPIFGLYPAFMNQFTVKWTENGERKS CEEEEEEEEEEECCCCCEEEEEEECCEEEEECCCCEEEEECHHHHCCEEEEECCCCCCCC HNYKMLTPDIDMGFSESQWAKAPLVEVEHVDADFKDRLYFVNWTNADGKAAPLMHNNADA CCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEECCCCCC PGAFSWDGKPGFFIIDTAGDIRWYMNPYTTHDAKSFDSAGYAMGMNVTKDGNMVWVQGQG CCEEECCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECEEECCCCEEEEECCC WKKMSIMGRMISEHNLPGNFIDASHEGIEGANGNVFIRAAAKDYRTSDGRLVNTIRDQII CCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHEE EVDNTGKLVDYWDLNTILDPMRDAALLSLDAGAVCLNINLDDAGHQTTEEDLANAPYGDI EECCCCCEEEEECCHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHCCCCCCE HGVATGRNWAHVNSIEYDPKDDSIIISSRHQSAVIKIGRDKQVKWILSASKGWSEKFQDK EEEECCCCEEEECCEECCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCHHHHHHH LLKPITPDGEPIWCNEKGACQDKDFDFSWTSHTAYLVPEKGTLTVFDNGDGRDLGQPMFA HCCCCCCCCCEEEECCCCCCCCCCCCEEECCCEEEEEECCCEEEEEECCCCCCCCCCCHH TEKYSRSVEYKIDEQNMTVLQVWEYGKDELGYEGYSPVTSIVKYQADKDSMMSYFASAGL HHHHCCCEEEEECCCCCEEEEEEECCCHHCCCCCCCHHHHHHEECCCHHHHHHHHHHCCC FGLGGGYGNLKMDDTTGKVQSILVEHRYGETEPAVRINIDSHDMFATGYRAQVIRVNEML EECCCCCCCEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCEEEEEEECHHC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA