Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is yaeQ [H]
Identifier: 167623492
GI number: 167623492
Start: 1881097
End: 1881642
Strand: Direct
Name: yaeQ [H]
Synonym: Shal_1561
Alternate gene names: 167623492
Gene position: 1881097-1881642 (Clockwise)
Preceding gene: 167623491
Following gene: 167623496
Centisome position: 35.99
GC content: 43.41
Gene sequence:
>546_bases ATGGCTAAAAAAGCTACCGTATATAAAATTGCAATCCAAATCGCCGATATGGATCGTGGCTATTATCAAGATCATCAATT GACCGTTGCACAGCACCCGTCAGAAACCGATGAGCGCATGATGGTCAGATTACTTGCTTTTGCCATGAACGCCAGTGACT CACTGACGTTTAGTAAAGGACTGTGTGTTGATGACGAGCCAGAACTTTGGGATAAGTCTTTATCAGATGAAATTAACCTT TGGGTTGAGTTTGGTCAAAGCGATGAGAAGTGGCTGCGTAAGGCTTGTGGCCGTGCTAAAGAAGTGCAACTGATCACTTA TGGTGGTCGTAGTGTGCCTATCTGGTGGAAACAAAATGAAGCAGCATTTGAGCGTTATGACAACTTAACCGTTTGGAATA TTCCAGAGGACTCAGTTAAAGCGATGGGGCAATTAGTGGGTCGCAATATGTCTTTGCAGTTTAATATCTGTGAAGGGCAG ATCTGGATCTCTGATAATGATAACAGCGTACTGGTTGAGCCTGAACTACTCAAAGGCGATAAGTAA
Upstream 100 bases:
>100_bases GAGAGTGCGTATTGGTATGGGGAGTTTTTAATTCTCGATTGTGTGCTCATCGCTTGATTTGAGGTAGACTTGGCGCAAAC TCTTTTGTGAAACACTCCTA
Downstream 100 bases:
>100_bases GCTTACCCAATCCGCGGCGATATTAGCGAGCAACCCAAATTATGGGTATTAAAAAGCCAGTCAAATGACTGGCTTTTTTA CACTTCAAATCAAATTTCGA
Product: YaeQ family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MAKKATVYKIAIQIADMDRGYYQDHQLTVAQHPSETDERMMVRLLAFAMNASDSLTFSKGLCVDDEPELWDKSLSDEINL WVEFGQSDEKWLRKACGRAKEVQLITYGGRSVPIWWKQNEAAFERYDNLTVWNIPEDSVKAMGQLVGRNMSLQFNICEGQ IWISDNDNSVLVEPELLKGDK
Sequences:
>Translated_181_residues MAKKATVYKIAIQIADMDRGYYQDHQLTVAQHPSETDERMMVRLLAFAMNASDSLTFSKGLCVDDEPELWDKSLSDEINL WVEFGQSDEKWLRKACGRAKEVQLITYGGRSVPIWWKQNEAAFERYDNLTVWNIPEDSVKAMGQLVGRNMSLQFNICEGQ IWISDNDNSVLVEPELLKGDK >Mature_180_residues AKKATVYKIAIQIADMDRGYYQDHQLTVAQHPSETDERMMVRLLAFAMNASDSLTFSKGLCVDDEPELWDKSLSDEINLW VEFGQSDEKWLRKACGRAKEVQLITYGGRSVPIWWKQNEAAFERYDNLTVWNIPEDSVKAMGQLVGRNMSLQFNICEGQI WISDNDNSVLVEPELLKGDK
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=172, Percent_Identity=45.3488372093023, Blast_Score=169, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 20769; Mature: 20638
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKATVYKIAIQIADMDRGYYQDHQLTVAQHPSETDERMMVRLLAFAMNASDSLTFSKG CCCCCEEEEEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCC LCVDDEPELWDKSLSDEINLWVEFGQSDEKWLRKACGRAKEVQLITYGGRSVPIWWKQNE CCCCCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCC AAFERYDNLTVWNIPEDSVKAMGQLVGRNMSLQFNICEGQIWISDNDNSVLVEPELLKGD HHHHHHCCCEEEECCHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCEEEECHHHCCCC K C >Mature Secondary Structure AKKATVYKIAIQIADMDRGYYQDHQLTVAQHPSETDERMMVRLLAFAMNASDSLTFSKG CCCCEEEEEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCC LCVDDEPELWDKSLSDEINLWVEFGQSDEKWLRKACGRAKEVQLITYGGRSVPIWWKQNE CCCCCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCC AAFERYDNLTVWNIPEDSVKAMGQLVGRNMSLQFNICEGQIWISDNDNSVLVEPELLKGD HHHHHHCCCEEEECCHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCEEEECHHHCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]