Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is yaeQ [H]

Identifier: 167623492

GI number: 167623492

Start: 1881097

End: 1881642

Strand: Direct

Name: yaeQ [H]

Synonym: Shal_1561

Alternate gene names: 167623492

Gene position: 1881097-1881642 (Clockwise)

Preceding gene: 167623491

Following gene: 167623496

Centisome position: 35.99

GC content: 43.41

Gene sequence:

>546_bases
ATGGCTAAAAAAGCTACCGTATATAAAATTGCAATCCAAATCGCCGATATGGATCGTGGCTATTATCAAGATCATCAATT
GACCGTTGCACAGCACCCGTCAGAAACCGATGAGCGCATGATGGTCAGATTACTTGCTTTTGCCATGAACGCCAGTGACT
CACTGACGTTTAGTAAAGGACTGTGTGTTGATGACGAGCCAGAACTTTGGGATAAGTCTTTATCAGATGAAATTAACCTT
TGGGTTGAGTTTGGTCAAAGCGATGAGAAGTGGCTGCGTAAGGCTTGTGGCCGTGCTAAAGAAGTGCAACTGATCACTTA
TGGTGGTCGTAGTGTGCCTATCTGGTGGAAACAAAATGAAGCAGCATTTGAGCGTTATGACAACTTAACCGTTTGGAATA
TTCCAGAGGACTCAGTTAAAGCGATGGGGCAATTAGTGGGTCGCAATATGTCTTTGCAGTTTAATATCTGTGAAGGGCAG
ATCTGGATCTCTGATAATGATAACAGCGTACTGGTTGAGCCTGAACTACTCAAAGGCGATAAGTAA

Upstream 100 bases:

>100_bases
GAGAGTGCGTATTGGTATGGGGAGTTTTTAATTCTCGATTGTGTGCTCATCGCTTGATTTGAGGTAGACTTGGCGCAAAC
TCTTTTGTGAAACACTCCTA

Downstream 100 bases:

>100_bases
GCTTACCCAATCCGCGGCGATATTAGCGAGCAACCCAAATTATGGGTATTAAAAAGCCAGTCAAATGACTGGCTTTTTTA
CACTTCAAATCAAATTTCGA

Product: YaeQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MAKKATVYKIAIQIADMDRGYYQDHQLTVAQHPSETDERMMVRLLAFAMNASDSLTFSKGLCVDDEPELWDKSLSDEINL
WVEFGQSDEKWLRKACGRAKEVQLITYGGRSVPIWWKQNEAAFERYDNLTVWNIPEDSVKAMGQLVGRNMSLQFNICEGQ
IWISDNDNSVLVEPELLKGDK

Sequences:

>Translated_181_residues
MAKKATVYKIAIQIADMDRGYYQDHQLTVAQHPSETDERMMVRLLAFAMNASDSLTFSKGLCVDDEPELWDKSLSDEINL
WVEFGQSDEKWLRKACGRAKEVQLITYGGRSVPIWWKQNEAAFERYDNLTVWNIPEDSVKAMGQLVGRNMSLQFNICEGQ
IWISDNDNSVLVEPELLKGDK
>Mature_180_residues
AKKATVYKIAIQIADMDRGYYQDHQLTVAQHPSETDERMMVRLLAFAMNASDSLTFSKGLCVDDEPELWDKSLSDEINLW
VEFGQSDEKWLRKACGRAKEVQLITYGGRSVPIWWKQNEAAFERYDNLTVWNIPEDSVKAMGQLVGRNMSLQFNICEGQI
WISDNDNSVLVEPELLKGDK

Specific function: Unknown

COG id: COG4681

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786388, Length=172, Percent_Identity=45.3488372093023, Blast_Score=169, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009822 [H]

Pfam domain/function: PF07152 YaeQ [H]

EC number: NA

Molecular weight: Translated: 20769; Mature: 20638

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKATVYKIAIQIADMDRGYYQDHQLTVAQHPSETDERMMVRLLAFAMNASDSLTFSKG
CCCCCEEEEEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCC
LCVDDEPELWDKSLSDEINLWVEFGQSDEKWLRKACGRAKEVQLITYGGRSVPIWWKQNE
CCCCCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCC
AAFERYDNLTVWNIPEDSVKAMGQLVGRNMSLQFNICEGQIWISDNDNSVLVEPELLKGD
HHHHHHCCCEEEECCHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCEEEECHHHCCCC
K
C
>Mature Secondary Structure 
AKKATVYKIAIQIADMDRGYYQDHQLTVAQHPSETDERMMVRLLAFAMNASDSLTFSKG
CCCCEEEEEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCC
LCVDDEPELWDKSLSDEINLWVEFGQSDEKWLRKACGRAKEVQLITYGGRSVPIWWKQNE
CCCCCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCC
AAFERYDNLTVWNIPEDSVKAMGQLVGRNMSLQFNICEGQIWISDNDNSVLVEPELLKGD
HHHHHHCCCEEEECCHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCEEEECHHHCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]