Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is cheV [H]
Identifier: 167623477
GI number: 167623477
Start: 1868247
End: 1869149
Strand: Direct
Name: cheV [H]
Synonym: Shal_1546
Alternate gene names: 167623477
Gene position: 1868247-1869149 (Clockwise)
Preceding gene: 167623476
Following gene: 167623478
Centisome position: 35.74
GC content: 45.51
Gene sequence:
>903_bases ATGAAGAGCAAAGCGAGTCAATCTCAAGGCTTACTCTTGTTTCAACTGTCTCTGACACAGTTATTTGCCTTGGGCACCTT AAAAATACGCGAATTGGTTCCCTACACCCCATTGAGCGCTATTCCTCATTCCCACCCAACGATTTTAGGGGCGGCTAACA TCCGAGGCGCCACCATTCCCATTGTAGATATGGCCGCCGCCGTTGGTTATCGACCGATTAGTAAAGAGGAGCTAGCAGAT AGCTATATTATTATTACCGACTGCCAAAGAATGGTGATTGGTTTTTTAGTTCGTTCAATCGACAAGATTATAGAATGTAA CTGGCGTGATATCGAAAAACCGCCCAGTAATTTGGGGAAGAATGCATATCTTACTGGCGTGACTAAAATCGAAGGTAAGC TGGTGCAGCTACTCGATGTTGAACTGCTACTGTCTAAAGTCTTTCCGGCTAGTCCTGAAACAAGTCGAGCGATCCTTACA GACGTCCAGCGAGAGTGTCTTAAGCCACTCAATATTTTGTTGGTTGATGACTCTAAAGTGGCACGTAAGCAGCTTAGCGA CGCACTAGACAGCATTAATATTCCGTATCAGGTGACTGCTGATGGTAAGGAGGCTCTGTCGATAATGCAGCAAGCTGAGC GCGATAATCACGCCATTGATATTTTAGTGAGTGATATCGAGATGCCTGGACTCGATGGTTATGAGCTGGCATTTGAAGTT AAGAATAATCCAGCGATTGCACCTGCCTATATTATCTTACACACCTCACTTTCTAGCGAAATCAGCGTCAGCCAGGCTCA TCAAGTAGGAGCTAATGAGGCGCTAACAAAGTTTTGTGCTCATGAGTTGATTGACGCCATGTTACGCGGGGCAGAGAAGG CCGTGGATAAGGCTAATCTTTAG
Upstream 100 bases:
>100_bases CAGCTTTAATTGTGTGCTTATTATGATTGAGTTAGAGTTTGCTCAAACCTATTAGATAGTAAGTGGCTGCACTAAGATGG AAGCAATAACAGGTAATAAA
Downstream 100 bases:
>100_bases GACCTTATTAGCAATATGTTAATCGTGAGTAATATCCGAGTCTATTTGTCAGGCAAAGCTAGACAATAGTTGCCACTTCC GATACAAACTGTGTCGAAGG
Product: response regulator receiver modulated CheW protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKSKASQSQGLLLFQLSLTQLFALGTLKIRELVPYTPLSAIPHSHPTILGAANIRGATIPIVDMAAAVGYRPISKEELAD SYIIITDCQRMVIGFLVRSIDKIIECNWRDIEKPPSNLGKNAYLTGVTKIEGKLVQLLDVELLLSKVFPASPETSRAILT DVQRECLKPLNILLVDDSKVARKQLSDALDSINIPYQVTADGKEALSIMQQAERDNHAIDILVSDIEMPGLDGYELAFEV KNNPAIAPAYIILHTSLSSEISVSQAHQVGANEALTKFCAHELIDAMLRGAEKAVDKANL
Sequences:
>Translated_300_residues MKSKASQSQGLLLFQLSLTQLFALGTLKIRELVPYTPLSAIPHSHPTILGAANIRGATIPIVDMAAAVGYRPISKEELAD SYIIITDCQRMVIGFLVRSIDKIIECNWRDIEKPPSNLGKNAYLTGVTKIEGKLVQLLDVELLLSKVFPASPETSRAILT DVQRECLKPLNILLVDDSKVARKQLSDALDSINIPYQVTADGKEALSIMQQAERDNHAIDILVSDIEMPGLDGYELAFEV KNNPAIAPAYIILHTSLSSEISVSQAHQVGANEALTKFCAHELIDAMLRGAEKAVDKANL >Mature_300_residues MKSKASQSQGLLLFQLSLTQLFALGTLKIRELVPYTPLSAIPHSHPTILGAANIRGATIPIVDMAAAVGYRPISKEELAD SYIIITDCQRMVIGFLVRSIDKIIECNWRDIEKPPSNLGKNAYLTGVTKIEGKLVQLLDVELLLSKVFPASPETSRAILT DVQRECLKPLNILLVDDSKVARKQLSDALDSINIPYQVTADGKEALSIMQQAERDNHAIDILVSDIEMPGLDGYELAFEV KNNPAIAPAYIILHTSLSSEISVSQAHQVGANEALTKFCAHELIDAMLRGAEKAVDKANL
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: 2.7.3.- [C]
Molecular weight: Translated: 32736; Mature: 32736
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKASQSQGLLLFQLSLTQLFALGTLKIRELVPYTPLSAIPHSHPTILGAANIRGATIP CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEECCCCCCEEH IVDMAAAVGYRPISKEELADSYIIITDCQRMVIGFLVRSIDKIIECNWRDIEKPPSNLGK HHHHHHHHCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC NAYLTGVTKIEGKLVQLLDVELLLSKVFPASPETSRAILTDVQRECLKPLNILLVDDSKV CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHH ARKQLSDALDSINIPYQVTADGKEALSIMQQAERDNHAIDILVSDIEMPGLDGYELAFEV HHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEE KNNPAIAPAYIILHTSLSSEISVSQAHQVGANEALTKFCAHELIDAMLRGAEKAVDKANL CCCCCCCEEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSKASQSQGLLLFQLSLTQLFALGTLKIRELVPYTPLSAIPHSHPTILGAANIRGATIP CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEECCCCCCEEH IVDMAAAVGYRPISKEELADSYIIITDCQRMVIGFLVRSIDKIIECNWRDIEKPPSNLGK HHHHHHHHCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC NAYLTGVTKIEGKLVQLLDVELLLSKVFPASPETSRAILTDVQRECLKPLNILLVDDSKV CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHH ARKQLSDALDSINIPYQVTADGKEALSIMQQAERDNHAIDILVSDIEMPGLDGYELAFEV HHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEE KNNPAIAPAYIILHTSLSSEISVSQAHQVGANEALTKFCAHELIDAMLRGAEKAVDKANL CCCCCCCEEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]