Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is 167622266
Identifier: 167622266
GI number: 167622266
Start: 386672
End: 386920
Strand: Direct
Name: 167622266
Synonym: Shal_0325
Alternate gene names: NA
Gene position: 386672-386920 (Clockwise)
Preceding gene: 167622265
Following gene: 167622270
Centisome position: 7.4
GC content: 34.14
Gene sequence:
>249_bases ATGGCTAAAAATTCAAAACGAACAACTAAACAATTAGCTTCTACAGCTGCAAAATTTCTTTCTGATGCTAATTCTTCAAA AATAAAAAAGCATTTGTCTGGAAGTGTATTGGCTCAATCTCGTACAACGAAGCAGACTGGGAAGAAGATGGAATCTGAAC TTTCAGCAATTTTGAAAAGCTCAAAATATGACAAAGATACAAAAATGTTGGCAGCTTCTTTATTAAGCCAATCCAACTCA AGTCGCTAA
Upstream 100 bases:
>100_bases CCTTAAGGTGGTCTTACCAGTTGATCTAATGGTTTATTCGTAATACTCTTATGTTGTTGCAAGGTAAAGTATTCGTAATC AATAATCTAATGAGGTTTAC
Downstream 100 bases:
>100_bases AGTGATAAAACATAGTTTCAATTAGTCGATAAGGCTTAATTAAAGTTTAATGGCTCTCTTCCTAATGAATAGAACTCTAA AGCTAAATTACTCCGCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MAKNSKRTTKQLASTAAKFLSDANSSKIKKHLSGSVLAQSRTTKQTGKKMESELSAILKSSKYDKDTKMLAASLLSQSNS SR
Sequences:
>Translated_82_residues MAKNSKRTTKQLASTAAKFLSDANSSKIKKHLSGSVLAQSRTTKQTGKKMESELSAILKSSKYDKDTKMLAASLLSQSNS SR >Mature_81_residues AKNSKRTTKQLASTAAKFLSDANSSKIKKHLSGSVLAQSRTTKQTGKKMESELSAILKSSKYDKDTKMLAASLLSQSNSS R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8866; Mature: 8735
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNSKRTTKQLASTAAKFLSDANSSKIKKHLSGSVLAQSRTTKQTGKKMESELSAILKS CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKYDKDTKMLAASLLSQSNSSR CCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AKNSKRTTKQLASTAAKFLSDANSSKIKKHLSGSVLAQSRTTKQTGKKMESELSAILKS CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKYDKDTKMLAASLLSQSNSSR CCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA