Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622247

Identifier: 167622247

GI number: 167622247

Start: 364606

End: 365124

Strand: Reverse

Name: 167622247

Synonym: Shal_0306

Alternate gene names: NA

Gene position: 365124-364606 (Counterclockwise)

Preceding gene: 167622251

Following gene: 167622246

Centisome position: 6.99

GC content: 46.44

Gene sequence:

>519_bases
ATGAAATTAATAACTGCAACTCTGTTTACCATGACAGCCCTTTTGAGCATGCCAACAAATGCAGGAATTTTAGATCAGCT
AGCCCAAGCGACTGAACCCGCTAAAGTGCAAACCCAGCAGGCTCAATCAAATGACTTAGTTGGTGCGGTCATGTCTCAGC
TGGGTCTTAGCCAAACACAAGCAGAAGGTGGATTAGGCAGCATACTGTCACTGGCGCAAAGCACTCTAGGCAGCAGTGAC
TTTAGTTCAATATCTGATTCGATCCCTGGTATAGACGGGCTCTTAAGCGCAGCACCAGAGCTCGATAGCGATTCAGGCAT
GTCAGGACTTCTCTCAAAAGCAGGCGATTTGGGGCAGTCTCTACAAGGTGGCGCCATGGTTTATGACGCCTTTGAAAAGC
TAGGTATTTCAAAAGAGTTGGCAGCGCCTATGGTCGATATCGTTAAGAGTTATTTAGACACTAACGGCAGCGCCGGCACA
TCAAACCTATTAATGAAAGGCCTTAATTCCATTTTATAG

Upstream 100 bases:

>100_bases
ACCAATTCCTTGCTCCATAGAAACAAAAAATGCAAACAAATTGTCAAAAGCGCTAGAATGGTCAATGATTGAGTGATTAA
ACGACACAAGGATAGCCGCG

Downstream 100 bases:

>100_bases
CTCCCTCTTTTGCCCTTCTCGGCTAGCAACTCCTGGCTGAGAGGGAACTCTCTGCCATAATTAGGCTCTAATATCCATCA
GTACAAGGTTAAGGAGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKLITATLFTMTALLSMPTNAGILDQLAQATEPAKVQTQQAQSNDLVGAVMSQLGLSQTQAEGGLGSILSLAQSTLGSSD
FSSISDSIPGIDGLLSAAPELDSDSGMSGLLSKAGDLGQSLQGGAMVYDAFEKLGISKELAAPMVDIVKSYLDTNGSAGT
SNLLMKGLNSIL

Sequences:

>Translated_172_residues
MKLITATLFTMTALLSMPTNAGILDQLAQATEPAKVQTQQAQSNDLVGAVMSQLGLSQTQAEGGLGSILSLAQSTLGSSD
FSSISDSIPGIDGLLSAAPELDSDSGMSGLLSKAGDLGQSLQGGAMVYDAFEKLGISKELAAPMVDIVKSYLDTNGSAGT
SNLLMKGLNSIL
>Mature_172_residues
MKLITATLFTMTALLSMPTNAGILDQLAQATEPAKVQTQQAQSNDLVGAVMSQLGLSQTQAEGGLGSILSLAQSTLGSSD
FSSISDSIPGIDGLLSAAPELDSDSGMSGLLSKAGDLGQSLQGGAMVYDAFEKLGISKELAAPMVDIVKSYLDTNGSAGT
SNLLMKGLNSIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17472; Mature: 17472

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLITATLFTMTALLSMPTNAGILDQLAQATEPAKVQTQQAQSNDLVGAVMSQLGLSQTQ
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
AEGGLGSILSLAQSTLGSSDFSSISDSIPGIDGLLSAAPELDSDSGMSGLLSKAGDLGQS
HCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
LQGGAMVYDAFEKLGISKELAAPMVDIVKSYLDTNGSAGTSNLLMKGLNSIL
HCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKLITATLFTMTALLSMPTNAGILDQLAQATEPAKVQTQQAQSNDLVGAVMSQLGLSQTQ
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
AEGGLGSILSLAQSTLGSSDFSSISDSIPGIDGLLSAAPELDSDSGMSGLLSKAGDLGQS
HCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
LQGGAMVYDAFEKLGISKELAAPMVDIVKSYLDTNGSAGTSNLLMKGLNSIL
HCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA