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The map label for this gene is ftsY [H]

Identifier: 167622228

GI number: 167622228

Start: 343140

End: 344933

Strand: Direct

Name: ftsY [H]

Synonym: Shal_0287

Alternate gene names: 167622228

Gene position: 343140-344933 (Clockwise)

Preceding gene: 167622225

Following gene: 167622229

Centisome position: 6.56

GC content: 50.39

Gene sequence:

>1794_bases
ATGGCAAAGAAAGGTTTTTTTTCCTGGTTCCGCAAGGATAAATCTAACGAAGAAGCGCAGGCTGTAGAAGCGGCGAAATT
AGAAGCTGAAAAGCTTGAATTAGAAGAAGCTGAAAAGCTTGAACTTGAAAGAGCTGAAGCTGAGCGTCTCGCTGCCGAGC
AGGCCGAAACGGAAAGGCTTGCAGAAGAAGCACGCCTAGCTGTGGAGCAGGCTGAAGCCGAGCGTATTGAATCGGAACGT
GTAGAAGCTGAGCGCCATGCGGCAGAGCAGGCTGAAGCCCAAAGAGTTGCAGAAGAGACGGCAGCTGAACAGGCTCGTTT
AGCAGCAGAGCTGGCGGCTCAAGCAGAAACTCAAAGAATCGAAGCTGAGCGTCTTGAATCTGAAAGAGAGGCAGCAGAGC
AAGCTGAAGGCCAAAGAATTGAAGCTGCGCGTCTTGAGTCTGAAAGAGTGATAGCCGAGCAGGCTGAGGCTCAAAGAGTT
GCGACTGAGCAAGCGTCTCAAGCGGAAGCTGCACGCATTGAAGCAGAACGCATTGAAGCTGCGCGTATTGAGTCTGAAAG
AGTGGTGGCCGAGCAGGCTGAATCAGCACGTATCGCAGCTGAACAAGCTGAAGCCCAAAGAATTGAAGCTACACGCATTG
AAGCAGCACGCATTGAAGCTGAACGCATTGAAGCTGCACGCATTGAAGCTGCACGCATTGAAGCTGCACGCATTGAAGCA
GAACGCATTGAAGCCGAGCGCATTGAAGCCGAGCGTATTGAAGCTGAGCGTATTGAAGCTGAAGCTGCAGACCAAGCCGC
ACAACTAGAAGCGGCAGAGGAGCAGCAACCAGAACCACAGGCTAAGCCGGTTAAAGAGGGTCTATTTGCTCGTCTTAAGC
GCGGCCTTAAGCGTACCAGTGAGAGTATCGGTAGCGGCTTTATTGGTTTGTTTAGTGGTAAGAAGATCGATGACGATCTG
TTCGAAGAGTTAGAAGAACAGTTATTGATTGCCGATGTGGGCGTGGAAACGACTACGCGCTTGATTAAGAATTTAACCGA
GCAGGCTAGCCGTAAGCAGCTAAAAGATGGCGAAGCGCTATATGAGTTACTGCGTGAGGAGATGCAAAAGACGCTAGAAC
CGGTTTCTGTGCCATTAGTGCCAGAAAATGCCGATGGCCCATTTGTGATCTTAATGGTTGGCGTCAATGGCGTAGGTAAA
ACCACCACCATAGGTAAGCTTGCTAAGCAGTATCAGGCACAAGGTAAGTCTGTGATGTTAGCGGCGGGTGACACATTCCG
TGCAGCTGCCGTCGAGCAGTTACAAGTTTGGGGTCAGCGTAATAACATTCCTGTTATCGCCCAGCATACCGGTGCCGACA
GTGCATCGGTGTTGTTTGACGCACTGCAAGCCGCTCGTGCTCGTAAGGTCGATGTGTTGATCGCCGACACCGCGGGTCGT
TTGCAGAACAAGGCGCACTTGATGGACGAACTGAAGAAAGTCGTTCGAGTGATGAAGAAACAAGATGAAACAGCGCCACA
TGAGGTGATGCTAACCTTAGATGCGAGCACGGGTCAGAACGCGATTAGTCAGGCGCAGCTGTTCCAAGAGGCTGTTGGCG
TAACTGGTATTACTATCAGTAAGCTAGACGGCACCGCAAAAGGTGGGGTTATCTTTGCTATCGCCGATAAGTTTGGCATT
CCAATTCGCCATATTGGTGTGGGTGAGCAGATCGACGATCTACGAACCTTCGATGCTAAAGACTTTATTGAAGCCTTGTT
TAGTCAGACAAAAGACGACAAAGACGCTAAATAG

Upstream 100 bases:

>100_bases
GTTTTCGCTGTTTTTATCAGCGTAATTTGAGCTGGTTTTTGATATAACGTCCTCCACCCTAATGCATTTATGTACAGCTA
TTTGAGCACCGGTATAACAC

Downstream 100 bases:

>100_bases
CGTTAGCTTAAAGAAGATAATCTAAGCAGCATACTCGATGCGATATCGCCAACTAACAAGAAATCTAATTAATGATTCGA
TTTGAGCAGGTAAGTAAAGT

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 597; Mature: 596

Protein sequence:

>597_residues
MAKKGFFSWFRKDKSNEEAQAVEAAKLEAEKLELEEAEKLELERAEAERLAAEQAETERLAEEARLAVEQAEAERIESER
VEAERHAAEQAEAQRVAEETAAEQARLAAELAAQAETQRIEAERLESEREAAEQAEGQRIEAARLESERVIAEQAEAQRV
ATEQASQAEAARIEAERIEAARIESERVVAEQAESARIAAEQAEAQRIEATRIEAARIEAERIEAARIEAARIEAARIEA
ERIEAERIEAERIEAERIEAEAADQAAQLEAAEEQQPEPQAKPVKEGLFARLKRGLKRTSESIGSGFIGLFSGKKIDDDL
FEELEEQLLIADVGVETTTRLIKNLTEQASRKQLKDGEALYELLREEMQKTLEPVSVPLVPENADGPFVILMVGVNGVGK
TTTIGKLAKQYQAQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVLFDALQAARARKVDVLIADTAGR
LQNKAHLMDELKKVVRVMKKQDETAPHEVMLTLDASTGQNAISQAQLFQEAVGVTGITISKLDGTAKGGVIFAIADKFGI
PIRHIGVGEQIDDLRTFDAKDFIEALFSQTKDDKDAK

Sequences:

>Translated_597_residues
MAKKGFFSWFRKDKSNEEAQAVEAAKLEAEKLELEEAEKLELERAEAERLAAEQAETERLAEEARLAVEQAEAERIESER
VEAERHAAEQAEAQRVAEETAAEQARLAAELAAQAETQRIEAERLESEREAAEQAEGQRIEAARLESERVIAEQAEAQRV
ATEQASQAEAARIEAERIEAARIESERVVAEQAESARIAAEQAEAQRIEATRIEAARIEAERIEAARIEAARIEAARIEA
ERIEAERIEAERIEAERIEAEAADQAAQLEAAEEQQPEPQAKPVKEGLFARLKRGLKRTSESIGSGFIGLFSGKKIDDDL
FEELEEQLLIADVGVETTTRLIKNLTEQASRKQLKDGEALYELLREEMQKTLEPVSVPLVPENADGPFVILMVGVNGVGK
TTTIGKLAKQYQAQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVLFDALQAARARKVDVLIADTAGR
LQNKAHLMDELKKVVRVMKKQDETAPHEVMLTLDASTGQNAISQAQLFQEAVGVTGITISKLDGTAKGGVIFAIADKFGI
PIRHIGVGEQIDDLRTFDAKDFIEALFSQTKDDKDAK
>Mature_596_residues
AKKGFFSWFRKDKSNEEAQAVEAAKLEAEKLELEEAEKLELERAEAERLAAEQAETERLAEEARLAVEQAEAERIESERV
EAERHAAEQAEAQRVAEETAAEQARLAAELAAQAETQRIEAERLESEREAAEQAEGQRIEAARLESERVIAEQAEAQRVA
TEQASQAEAARIEAERIEAARIESERVVAEQAESARIAAEQAEAQRIEATRIEAARIEAERIEAARIEAARIEAARIEAE
RIEAERIEAERIEAERIEAEAADQAAQLEAAEEQQPEPQAKPVKEGLFARLKRGLKRTSESIGSGFIGLFSGKKIDDDLF
EELEEQLLIADVGVETTTRLIKNLTEQASRKQLKDGEALYELLREEMQKTLEPVSVPLVPENADGPFVILMVGVNGVGKT
TTIGKLAKQYQAQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVLFDALQAARARKVDVLIADTAGRL
QNKAHLMDELKKVVRVMKKQDETAPHEVMLTLDASTGQNAISQAQLFQEAVGVTGITISKLDGTAKGGVIFAIADKFGIP
IRHIGVGEQIDDLRTFDAKDFIEALFSQTKDDKDAK

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=273, Percent_Identity=30.03663003663, Blast_Score=123, Evalue=6e-28,
Organism=Homo sapiens, GI226371618, Length=200, Percent_Identity=34.5, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI295424842, Length=363, Percent_Identity=26.4462809917355, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI23308697, Length=233, Percent_Identity=32.1888412017167, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI89061728, Length=145, Percent_Identity=28.9655172413793, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1789874, Length=327, Percent_Identity=76.4525993883792, Blast_Score=493, Evalue=1e-140,
Organism=Escherichia coli, GI1788963, Length=305, Percent_Identity=32.1311475409836, Blast_Score=136, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17539958, Length=275, Percent_Identity=29.0909090909091, Blast_Score=122, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI193206261, Length=312, Percent_Identity=28.525641025641, Blast_Score=111, Evalue=9e-25,
Organism=Saccharomyces cerevisiae, GI6325345, Length=199, Percent_Identity=36.6834170854271, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6320498, Length=320, Percent_Identity=27.8125, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI17647949, Length=275, Percent_Identity=29.4545454545455, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24641198, Length=402, Percent_Identity=24.8756218905473, Blast_Score=110, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 65648; Mature: 65517

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKGFFSWFRKDKSNEEAQAVEAAKLEAEKLELEEAEKLELERAEAERLAAEQAETERL
CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEEARLAVEQAEAERIESERVEAERHAAEQAEAQRVAEETAAEQARLAAELAAQAETQRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAERLESEREAAEQAEGQRIEAARLESERVIAEQAEAQRVATEQASQAEAARIEAERIEA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARIESERVVAEQAESARIAAEQAEAQRIEATRIEAARIEAERIEAARIEAARIEAARIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERIEAERIEAERIEAERIEAEAADQAAQLEAAEEQQPEPQAKPVKEGLFARLKRGLKRTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
ESIGSGFIGLFSGKKIDDDLFEELEEQLLIADVGVETTTRLIKNLTEQASRKQLKDGEAL
HHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHH
YELLREEMQKTLEPVSVPLVPENADGPFVILMVGVNGVGKTTTIGKLAKQYQAQGKSVML
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEE
AAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVLFDALQAARARKVDVLIADTAGR
ECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCHHH
LQNKAHLMDELKKVVRVMKKQDETAPHEVMLTLDASTGQNAISQAQLFQEAVGVTGITIS
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEE
KLDGTAKGGVIFAIADKFGIPIRHIGVGEQIDDLRTFDAKDFIEALFSQTKDDKDAK
CCCCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AKKGFFSWFRKDKSNEEAQAVEAAKLEAEKLELEEAEKLELERAEAERLAAEQAETERL
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEEARLAVEQAEAERIESERVEAERHAAEQAEAQRVAEETAAEQARLAAELAAQAETQRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAERLESEREAAEQAEGQRIEAARLESERVIAEQAEAQRVATEQASQAEAARIEAERIEA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARIESERVVAEQAESARIAAEQAEAQRIEATRIEAARIEAERIEAARIEAARIEAARIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERIEAERIEAERIEAERIEAEAADQAAQLEAAEEQQPEPQAKPVKEGLFARLKRGLKRTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
ESIGSGFIGLFSGKKIDDDLFEELEEQLLIADVGVETTTRLIKNLTEQASRKQLKDGEAL
HHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHH
YELLREEMQKTLEPVSVPLVPENADGPFVILMVGVNGVGKTTTIGKLAKQYQAQGKSVML
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEE
AAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVLFDALQAARARKVDVLIADTAGR
ECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCHHH
LQNKAHLMDELKKVVRVMKKQDETAPHEVMLTLDASTGQNAISQAQLFQEAVGVTGITIS
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEE
KLDGTAKGGVIFAIADKFGIPIRHIGVGEQIDDLRTFDAKDFIEALFSQTKDDKDAK
CCCCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]