| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is mgtE [H]
Identifier: 167622154
GI number: 167622154
Start: 256439
End: 257857
Strand: Reverse
Name: mgtE [H]
Synonym: Shal_0213
Alternate gene names: 167622154
Gene position: 257857-256439 (Counterclockwise)
Preceding gene: 167622155
Following gene: 167622152
Centisome position: 4.93
GC content: 50.6
Gene sequence:
>1419_bases ATGTCATTGCCAAAAGATGAACACCCTATCGATAACCGCCAACAACCAAGCGAAGCAGAATATGAAGCGCCGGAGTTAGC TATGGTAGAGGTGAGTCAATCTGTGGAGCAACTGACCAATGCAGAAGGCGAGCAGCAAGCCGAACTGTTCAATGACATGC TAGAAGAAGCGGAACCTGGCACAGTGGCTTTACTACTGGAGTCATTACCACTAGATGAGCGTTACGAGCGCTGGTCTCAA GTCGATGCTAATGAGCGCATTGGCGTATTAGACCTGATGCGTGCCGACCCACGTAATGGCATTTTGAAAGAGATGCCAGA AGTCGAATTAGACTCTCTGTTTTCGCAGATCTCACCAGAAGACTTGATTGAGTGGAGTGACACGCTCCCCGAGGCAATGA CCGATCGCGCCCTGTCACAAATGGGCGAGCGTCAAAGAGAACATTATGACCGCTATGACCAATACTCAGAAAACGAGATT GGCCGTTATGCAGAGCATCAATTCTTAGCGTTAAACCTCACATCGACGGTTTCACAGGCGCAACGTTTCTTTCGCCGCAT CAAACTCGACTGTAATGACCATGTATTTCTGCTCGATGATGATGACAAATATATTGGCAGCGTGCGTCGTCACGACGTAT TTCGTGCCGCTCCTGAGAGCACCTTAGCCAGTCTGCTTTGGGAGGACAGCCGCTCTATTCTTGCCGATTCCAGTTTGATT GAAGCCGCAGAAGCCATAGAACACAGTAATGAACTGGAAATAGCCGTTGTCGATGTGAGCGGCATCATGATTGGCCGCAT GACACTGCGCACCGCCACCGCCCTAGTGCGTGAACATTATGAGTCGCAGTTAATGGCAACGGCCGGTATGGACGAAGACG ACGACTTATTCGCTCCTATCACAGTCGGTGCCCGTCGCCGCGCAGTATGGCTAGGGATTAACTTGCTTACCGCATTTTTA GCCTCGGCCACCATTGGCCTATTTGAAAATGTGCTGGAGAAAGTGGTCGCTTTAGCAGTACTGATGCCAATAGTCGCATC AATGGGCGGGATTGCCGGCAGCCAGTCACTCACCTTGATGATCCGCGGTATGGCGATGGGACAGATATCCTCAGGTAACG TCGTGTCGCTGCTGAAAAACGAGCTGGGGATCGGCATTTTGAACGGCGTACTATGGGCGATTGTGATAGGCTTGATTGCC GGGTGGTGGTTTGGCGATCCCATCATTGGCACCGTAATCGGTGCCGCCATTTTAATTAATATGACGGTGGCCGCTATCGC AGGTGTCATGGTGCCGATGATATTGCAGAAAATGAACCAAGACGCAGCACTGTCGGGTTCAGTTATCTTAACCACTGTCA CCGACGTAGTGGGCTTTTTCTGCTTCTTAGGCCTCGCCTCAGTTCTGTATCTATACTAA
Upstream 100 bases:
>100_bases GGCGTTATACCAACAACGACTCGTAAACGCATTGCTGGTCAGTAGTTTAATCAACTTTTTCAAATTAGTTTTTCAAAGCC TCACTTAAGGTCAGTTAACC
Downstream 100 bases:
>100_bases TCTGTATCCATACTAAGCTTATACAATAAAGCCTAGCTAACACAGCTAGGCTTTTGTTTAAAAGGTGCTCTCTACTCAGC GACAGACGCTGCCTGTAAAC
Product: magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSLPKDEHPIDNRQQPSEAEYEAPELAMVEVSQSVEQLTNAEGEQQAELFNDMLEEAEPGTVALLLESLPLDERYERWSQ VDANERIGVLDLMRADPRNGILKEMPEVELDSLFSQISPEDLIEWSDTLPEAMTDRALSQMGERQREHYDRYDQYSENEI GRYAEHQFLALNLTSTVSQAQRFFRRIKLDCNDHVFLLDDDDKYIGSVRRHDVFRAAPESTLASLLWEDSRSILADSSLI EAAEAIEHSNELEIAVVDVSGIMIGRMTLRTATALVREHYESQLMATAGMDEDDDLFAPITVGARRRAVWLGINLLTAFL ASATIGLFENVLEKVVALAVLMPIVASMGGIAGSQSLTLMIRGMAMGQISSGNVVSLLKNELGIGILNGVLWAIVIGLIA GWWFGDPIIGTVIGAAILINMTVAAIAGVMVPMILQKMNQDAALSGSVILTTVTDVVGFFCFLGLASVLYLY
Sequences:
>Translated_472_residues MSLPKDEHPIDNRQQPSEAEYEAPELAMVEVSQSVEQLTNAEGEQQAELFNDMLEEAEPGTVALLLESLPLDERYERWSQ VDANERIGVLDLMRADPRNGILKEMPEVELDSLFSQISPEDLIEWSDTLPEAMTDRALSQMGERQREHYDRYDQYSENEI GRYAEHQFLALNLTSTVSQAQRFFRRIKLDCNDHVFLLDDDDKYIGSVRRHDVFRAAPESTLASLLWEDSRSILADSSLI EAAEAIEHSNELEIAVVDVSGIMIGRMTLRTATALVREHYESQLMATAGMDEDDDLFAPITVGARRRAVWLGINLLTAFL ASATIGLFENVLEKVVALAVLMPIVASMGGIAGSQSLTLMIRGMAMGQISSGNVVSLLKNELGIGILNGVLWAIVIGLIA GWWFGDPIIGTVIGAAILINMTVAAIAGVMVPMILQKMNQDAALSGSVILTTVTDVVGFFCFLGLASVLYLY >Mature_471_residues SLPKDEHPIDNRQQPSEAEYEAPELAMVEVSQSVEQLTNAEGEQQAELFNDMLEEAEPGTVALLLESLPLDERYERWSQV DANERIGVLDLMRADPRNGILKEMPEVELDSLFSQISPEDLIEWSDTLPEAMTDRALSQMGERQREHYDRYDQYSENEIG RYAEHQFLALNLTSTVSQAQRFFRRIKLDCNDHVFLLDDDDKYIGSVRRHDVFRAAPESTLASLLWEDSRSILADSSLIE AAEAIEHSNELEIAVVDVSGIMIGRMTLRTATALVREHYESQLMATAGMDEDDDLFAPITVGARRRAVWLGINLLTAFLA SATIGLFENVLEKVVALAVLMPIVASMGGIAGSQSLTLMIRGMAMGQISSGNVVSLLKNELGIGILNGVLWAIVIGLIAG WWFGDPIIGTVIGAAILINMTVAAIAGVMVPMILQKMNQDAALSGSVILTTVTDVVGFFCFLGLASVLYLY
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 52042; Mature: 51911
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPKDEHPIDNRQQPSEAEYEAPELAMVEVSQSVEQLTNAEGEQQAELFNDMLEEAEPG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC TVALLLESLPLDERYERWSQVDANERIGVLDLMRADPRNGILKEMPEVELDSLFSQISPE CEEHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCHH DLIEWSDTLPEAMTDRALSQMGERQREHYDRYDQYSENEIGRYAEHQFLALNLTSTVSQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEHHHHHHHH QRFFRRIKLDCNDHVFLLDDDDKYIGSVRRHDVFRAAPESTLASLLWEDSRSILADSSLI HHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH EAAEAIEHSNELEIAVVDVSGIMIGRMTLRTATALVREHYESQLMATAGMDEDDDLFAPI HHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECE TVGARRRAVWLGINLLTAFLASATIGLFENVLEKVVALAVLMPIVASMGGIAGSQSLTLM ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHE IRGMAMGQISSGNVVSLLKNELGIGILNGVLWAIVIGLIAGWWFGDPIIGTVIGAAILIN EEHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH MTVAAIAGVMVPMILQKMNQDAALSGSVILTTVTDVVGFFCFLGLASVLYLY HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLPKDEHPIDNRQQPSEAEYEAPELAMVEVSQSVEQLTNAEGEQQAELFNDMLEEAEPG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC TVALLLESLPLDERYERWSQVDANERIGVLDLMRADPRNGILKEMPEVELDSLFSQISPE CEEHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCHH DLIEWSDTLPEAMTDRALSQMGERQREHYDRYDQYSENEIGRYAEHQFLALNLTSTVSQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEHHHHHHHH QRFFRRIKLDCNDHVFLLDDDDKYIGSVRRHDVFRAAPESTLASLLWEDSRSILADSSLI HHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH EAAEAIEHSNELEIAVVDVSGIMIGRMTLRTATALVREHYESQLMATAGMDEDDDLFAPI HHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECE TVGARRRAVWLGINLLTAFLASATIGLFENVLEKVVALAVLMPIVASMGGIAGSQSLTLM ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHE IRGMAMGQISSGNVVSLLKNELGIGILNGVLWAIVIGLIAGWWFGDPIIGTVIGAAILIN EEHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH MTVAAIAGVMVPMILQKMNQDAALSGSVILTTVTDVVGFFCFLGLASVLYLY HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]