| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is gor [H]
Identifier: 167622131
GI number: 167622131
Start: 224775
End: 226130
Strand: Reverse
Name: gor [H]
Synonym: Shal_0190
Alternate gene names: 167622131
Gene position: 226130-224775 (Counterclockwise)
Preceding gene: 167622132
Following gene: 167622128
Centisome position: 4.33
GC content: 51.18
Gene sequence:
>1356_bases ATGGCTCAACATTTTGATTATATCTGCCTTGGTGCAGGTAGTGGCGGTATTGCATCGGCTAACAGAGCCGCCATGCGCGG CGCAAAAGTGCTACTTATCGAAGCAAAAGAGCTAGGTGGCACCTGTGTAAATGTAGGTTGCGTACCGAAAAAGGTGATGT GGTATGGCGCTCAGGTTGCCGAAGCTATGCACCTTTACGCTAAAGATTATGGTTTCGACGTGACCGTGAATAAGTTTGAC TGGAGCACCCTTGTTGCCAGTCGCGAAGCCTATATCGACCGTATCCACGGCTCATATGATCGCGGCCTAGAGAGCAATGG CGTTACCCTTGTTCGTGGTTACGGTCGTTTTGTCGACAGCAGCACCATCGAAGTGAATGGCGAGCACTACAGCGCCGACA ATATCTTGATCGCCACAGGCGGCGCAGCCACCATTCCAAATATTCCTGGCGCCGAGCACGGTATCGACTCAGATGGTTTC TTCGCATTAGCCGAGCAACCAAAACGCGTTGCGGTGATTGGTGCAGGCTACATTGCCGTTGAAGTGGCTGGCGTACTGCA AGCTCTAGGTAGCGATACTCACCTGTTTGTGCGTAAGCACGCCCCACTACGTAACTTTGACCCTATGCTAAGTGAAGCGC TGATGGAGTCTATGGCCACTGACGGCCCTACGCTGCATACTCACAGTGTGCCTGAGTCGGTCACCAAAAACAGTGATGGT AGCTTAACCCTTAAAATTGAAAATGGCGAAAGCTATGATATCGACTGCCTGATCTGGGCTATTGGTCGTCAGCCATCAAC AGCAAACATCGGCCTTGAAAACACCAAGGTTAAGCTAGACGAAAAAGGCTATGTGATCACCGATGAGCAGCAAAATACCA CGGACACGGGCATTTACTGTGTTGGTGATATCATGGCGGGCGGCGTAGAGCTAACGCCTGTCGCAGTTAAAGCGGGCCGT TTACTGTCAGAGCGCCTATTTAACGGCATGACAGACGCCAAGATGGATTACAGCTGCATTCCAACTGTCGTATTTAGCCA CCCAGCCATCGGCACCATGGGGTTAACCGAGCCTGAAGCCAAGGCTGAGTACGGCGAAGATAACGTGACGGTATACACCT CAGGCTTCACCTCTATGTACACAGCAGTAACCGCTCATCGTCAGGCTTGTAAGATGAAACTAATCTGCGCCGGCGATAAC CAGAAGGTCGTGGGTATTCACGGCATAGGTTACGGTATGGATGAAATTCTACAAGGCTTCGGCGTAGCGATGAAGATGGG CGCAACTAAGGCAGATTTCGATGCGGTTGTGGCTATCCACCCAACTGGATCTGAGGAATTTGTCACCATGAGGTAA
Upstream 100 bases:
>100_bases GCTTTTTGATCTAACAAGCGTATTAATGATAATTACAGGTACGAAGGCCCATATTCGTTTGCTTTTGTCCATCGGTTCGC AACTTTTATTGGAGATACAC
Downstream 100 bases:
>100_bases TTAGTTGATTACAAATAAAAAAGCCGCTTATTAAGCGGCTTTTTTGTATCTAAAACTTAAGGTCATATGTCAGTAAATCC TTTTACTGACATAGAGCTAA
Product: glutathione reductase
Products: NA
Alternate protein names: GR; GRase [H]
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MAQHFDYICLGAGSGGIASANRAAMRGAKVLLIEAKELGGTCVNVGCVPKKVMWYGAQVAEAMHLYAKDYGFDVTVNKFD WSTLVASREAYIDRIHGSYDRGLESNGVTLVRGYGRFVDSSTIEVNGEHYSADNILIATGGAATIPNIPGAEHGIDSDGF FALAEQPKRVAVIGAGYIAVEVAGVLQALGSDTHLFVRKHAPLRNFDPMLSEALMESMATDGPTLHTHSVPESVTKNSDG SLTLKIENGESYDIDCLIWAIGRQPSTANIGLENTKVKLDEKGYVITDEQQNTTDTGIYCVGDIMAGGVELTPVAVKAGR LLSERLFNGMTDAKMDYSCIPTVVFSHPAIGTMGLTEPEAKAEYGEDNVTVYTSGFTSMYTAVTAHRQACKMKLICAGDN QKVVGIHGIGYGMDEILQGFGVAMKMGATKADFDAVVAIHPTGSEEFVTMR
Sequences:
>Translated_451_residues MAQHFDYICLGAGSGGIASANRAAMRGAKVLLIEAKELGGTCVNVGCVPKKVMWYGAQVAEAMHLYAKDYGFDVTVNKFD WSTLVASREAYIDRIHGSYDRGLESNGVTLVRGYGRFVDSSTIEVNGEHYSADNILIATGGAATIPNIPGAEHGIDSDGF FALAEQPKRVAVIGAGYIAVEVAGVLQALGSDTHLFVRKHAPLRNFDPMLSEALMESMATDGPTLHTHSVPESVTKNSDG SLTLKIENGESYDIDCLIWAIGRQPSTANIGLENTKVKLDEKGYVITDEQQNTTDTGIYCVGDIMAGGVELTPVAVKAGR LLSERLFNGMTDAKMDYSCIPTVVFSHPAIGTMGLTEPEAKAEYGEDNVTVYTSGFTSMYTAVTAHRQACKMKLICAGDN QKVVGIHGIGYGMDEILQGFGVAMKMGATKADFDAVVAIHPTGSEEFVTMR >Mature_450_residues AQHFDYICLGAGSGGIASANRAAMRGAKVLLIEAKELGGTCVNVGCVPKKVMWYGAQVAEAMHLYAKDYGFDVTVNKFDW STLVASREAYIDRIHGSYDRGLESNGVTLVRGYGRFVDSSTIEVNGEHYSADNILIATGGAATIPNIPGAEHGIDSDGFF ALAEQPKRVAVIGAGYIAVEVAGVLQALGSDTHLFVRKHAPLRNFDPMLSEALMESMATDGPTLHTHSVPESVTKNSDGS LTLKIENGESYDIDCLIWAIGRQPSTANIGLENTKVKLDEKGYVITDEQQNTTDTGIYCVGDIMAGGVELTPVAVKAGRL LSERLFNGMTDAKMDYSCIPTVVFSHPAIGTMGLTEPEAKAEYGEDNVTVYTSGFTSMYTAVTAHRQACKMKLICAGDNQ KVVGIHGIGYGMDEILQGFGVAMKMGATKADFDAVVAIHPTGSEEFVTMR
Specific function: Maintains high levels of reduced glutathione in the cytosol [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=460, Percent_Identity=50.4347826086956, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI22035672, Length=459, Percent_Identity=35.9477124183007, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI148277065, Length=432, Percent_Identity=37.5, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI148277071, Length=432, Percent_Identity=37.5, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI33519430, Length=432, Percent_Identity=37.5, Blast_Score=255, Evalue=6e-68, Organism=Homo sapiens, GI33519428, Length=432, Percent_Identity=37.5, Blast_Score=255, Evalue=6e-68, Organism=Homo sapiens, GI33519426, Length=432, Percent_Identity=37.5, Blast_Score=255, Evalue=6e-68, Organism=Homo sapiens, GI291045266, Length=458, Percent_Identity=33.4061135371179, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI291045268, Length=458, Percent_Identity=30.1310043668122, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI91199540, Length=459, Percent_Identity=30.2832244008715, Blast_Score=179, Evalue=5e-45, Organism=Escherichia coli, GI1789915, Length=451, Percent_Identity=67.1840354767184, Blast_Score=632, Evalue=0.0, Organism=Escherichia coli, GI1786307, Length=456, Percent_Identity=28.0701754385965, Blast_Score=146, Evalue=3e-36, Organism=Escherichia coli, GI87082354, Length=436, Percent_Identity=25, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI87081717, Length=453, Percent_Identity=23.1788079470199, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1787114, Length=363, Percent_Identity=26.7217630853994, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71983419, Length=451, Percent_Identity=55.6541019955654, Blast_Score=449, Evalue=1e-126, Organism=Caenorhabditis elegans, GI71983429, Length=451, Percent_Identity=55.6541019955654, Blast_Score=449, Evalue=1e-126, Organism=Caenorhabditis elegans, GI17557007, Length=472, Percent_Identity=35.5932203389831, Blast_Score=283, Evalue=1e-76, Organism=Caenorhabditis elegans, GI71982272, Length=439, Percent_Identity=34.1685649202733, Blast_Score=241, Evalue=5e-64, Organism=Caenorhabditis elegans, GI32565766, Length=462, Percent_Identity=28.7878787878788, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI17559934, Length=194, Percent_Identity=24.2268041237113, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6325166, Length=466, Percent_Identity=49.3562231759657, Blast_Score=425, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6321091, Length=466, Percent_Identity=28.755364806867, Blast_Score=155, Evalue=9e-39, Organism=Saccharomyces cerevisiae, GI6325240, Length=467, Percent_Identity=23.7687366167024, Blast_Score=109, Evalue=8e-25, Organism=Drosophila melanogaster, GI24640549, Length=471, Percent_Identity=37.791932059448, Blast_Score=268, Evalue=4e-72, Organism=Drosophila melanogaster, GI24640553, Length=471, Percent_Identity=37.791932059448, Blast_Score=268, Evalue=4e-72, Organism=Drosophila melanogaster, GI24640551, Length=471, Percent_Identity=37.791932059448, Blast_Score=268, Evalue=6e-72, Organism=Drosophila melanogaster, GI17737741, Length=474, Percent_Identity=36.0759493670886, Blast_Score=248, Evalue=8e-66, Organism=Drosophila melanogaster, GI21358499, Length=457, Percent_Identity=28.8840262582057, Blast_Score=157, Evalue=1e-38,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR006322 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.7 [H]
Molecular weight: Translated: 48167; Mature: 48036
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQHFDYICLGAGSGGIASANRAAMRGAKVLLIEAKELGGTCVNVGCVPKKVMWYGAQVA CCCCCCEEEEECCCCCCCCCCHHHHCCCEEEEEEEHHCCCEEEEECCCCHHHHHHHHHHH EAMHLYAKDYGFDVTVNKFDWSTLVASREAYIDRIHGSYDRGLESNGVTLVRGYGRFVDS HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCCCC STIEVNGEHYSADNILIATGGAATIPNIPGAEHGIDSDGFFALAEQPKRVAVIGAGYIAV CEEEECCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHH EVAGVLQALGSDTHLFVRKHAPLRNFDPMLSEALMESMATDGPTLHTHSVPESVTKNSDG HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCC SLTLKIENGESYDIDCLIWAIGRQPSTANIGLENTKVKLDEKGYVITDEQQNTTDTGIYC EEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCEEE VGDIMAGGVELTPVAVKAGRLLSERLFNGMTDAKMDYSCIPTVVFSHPAIGTMGLTEPEA EEEHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHH KAEYGEDNVTVYTSGFTSMYTAVTAHRQACKMKLICAGDNQKVVGIHGIGYGMDEILQGF HHHCCCCCEEEEECCCHHHHHHHHHHHHHCEEEEEEECCCCEEEEEEECCCCHHHHHHHC GVAMKMGATKADFDAVVAIHPTGSEEFVTMR CCEEECCCCCCCCEEEEEEECCCCCCEEEEC >Mature Secondary Structure AQHFDYICLGAGSGGIASANRAAMRGAKVLLIEAKELGGTCVNVGCVPKKVMWYGAQVA CCCCCEEEEECCCCCCCCCCHHHHCCCEEEEEEEHHCCCEEEEECCCCHHHHHHHHHHH EAMHLYAKDYGFDVTVNKFDWSTLVASREAYIDRIHGSYDRGLESNGVTLVRGYGRFVDS HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCCCC STIEVNGEHYSADNILIATGGAATIPNIPGAEHGIDSDGFFALAEQPKRVAVIGAGYIAV CEEEECCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHH EVAGVLQALGSDTHLFVRKHAPLRNFDPMLSEALMESMATDGPTLHTHSVPESVTKNSDG HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCC SLTLKIENGESYDIDCLIWAIGRQPSTANIGLENTKVKLDEKGYVITDEQQNTTDTGIYC EEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCEEE VGDIMAGGVELTPVAVKAGRLLSERLFNGMTDAKMDYSCIPTVVFSHPAIGTMGLTEPEA EEEHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHH KAEYGEDNVTVYTSGFTSMYTAVTAHRQACKMKLICAGDNQKVVGIHGIGYGMDEILQGF HHHCCCCCEEEEECCCHHHHHHHHHHHHHCEEEEEEECCCCEEEEEEECCCCHHHHHHHC GVAMKMGATKADFDAVVAIHPTGSEEFVTMR CCEEECCCCCCCCEEEEEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3521741; 8041620; 9278503; 2006135; 8061609 [H]