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The map label for this gene is yeaV [H]

Identifier: 167622130

GI number: 167622130

Start: 222693

End: 224645

Strand: Direct

Name: yeaV [H]

Synonym: Shal_0189

Alternate gene names: 167622130

Gene position: 222693-224645 (Clockwise)

Preceding gene: 167622129

Following gene: 167622134

Centisome position: 4.26

GC content: 44.55

Gene sequence:

>1953_bases
ATGAAAAAACACTTCGAGCTTATCGATAAGCCGACATTTTTCGGCGCACTATTACTGCTTTGTGCAGTTGTTATTCCCTT
ACTGTTGTTTCCAGCTGAAGGGGCTGAATGGATTGCAGTTGCTAAAACATTTATGACAGACAAACTAGGCTTTGCTTATT
TGGGTCTGGGTTTAGCGGCATTTTTCTTCATGATCTATATCGTTTTCTCTGATATCGGTCAGATCAAACTGGGTGATCCT
GATGAAAAGCCTGAATTTGCACTGGCGTCTTGGGCGGCAATGTTATTTTGTGGCGGTATCGGTGCCAGTATTTTGTACTG
GGGCACCATTGAGTGGGCCTATTATTACCAAAATCCGCCTTTTCAGTTAGAAGCGGGTAGTGAAGAAGCGGTACGTTGGG
CTGCCACTTATGGTCTGTTCCACTGGGGACCCATTGCTTGGTGTATCTATATGATCCCAGCTATTCCAATCGCTTACTTC
TTCTATGTACGTAAACAGCCTGTATTAAAAGTCTCTGCTGCTTTAATGCCTGTTATTGGTGAAGCCAATAGCTTTGGTAA
GCTAGGTAAAGTGATCGACATTCTGTTTATCTTCGGCCTATTGGGCGGAGCGGCAACCACCTTAGGTTTAGCGGCACCAC
TGATTAACGAAGGCATTAGTTACCTGTTTGGTATCCCTGCGACGACTGGCAGCCAAATTTTAGTGCTGATGGTATGTACT
GCTATCTTTGCTTACTCTTCTTACATGGGGATGGACAAAGGCATTAAGATTTTAAGTAATATTAACTTCTGGGGTGCCCT
AGGCTTACTACTGTTTGTACTGGTTTGTGGCCCAACAATCTTCATGTTGGAAACAGGCTTAGATTCAATCGGTCGTATGT
TGTCTAACTTCTTTGTTATGGCGACTTGGGCAGAGCCTTTTGGTGGTATGGGTACCTTTGAAGACACGCATTTCCCACAA
GACTGGACCATTTTCTACTGGGCGTGGTGGTTAGTCTTTGCACCTAGCATGGGTCTATTTGTTGCGCGTATTTCACGTGG
TAGAACGATTAAGCAGATGGTGTCTGGTGCCGTATTCTTCGGTTCACTAGGTTGCTCTATGTACTTCATCATTCTTGGTA
ACTACGGTTTATCACTGCAGTTATCTGGTCAATTAGATGTGGTGAGCATTCTTAATGCAGAGGGCGCGACTCGCGCAATC
TTCGCAATTTTAGAAACGCTGCCATTTAGTACATTGATCATCGCACTATTTACTCTGTTATGTGTGATTTTCACTGCGAC
AACGTTTGACTCTATCTCATATATTTTGGCGTCAGTTGTGCAAACTAACGTAACTGAAGATCCAATGCGTTGGAACCGTT
TGTTCTGGGCTTTCACCCTATCATTTATGCCTTCGGCACTGATGTTTATGGGCGGTTTAGCCACATTGCAAACAGCGGCC
ATTGTCGGTGGTTTACCGCTATTGATTATTGCGGTGATGCTGATGATCTCAGGCGTTAAGGCGGCGATGTTAGATTTAAG
CCATCAAGATAACTATGTGGATCCTGTGATCAATATTTCAGATCTACCCGATGTTGATCCTTGGAGTAAAGAAGGTCAGG
CACTGGCACGTTTTGAAGCTTTACGTGATAAAGCGATTAATGCAGCGGATTTAGAGCGTGAAGCCAATGATGCAATCTGG
ATGCTGAAAAAGCAATTGCGTAGAGAAGCGTTAGCCCGTGGAGAGTCGAGTGTAGAGTTAGGTGATGCACCCGATGAGAT
CATCGAGCAGCTACGCCAGTTAACAGATGATTCGATGAAGGCGAAAGAAGCCAAACTTGCAGCATCTGAACTTGCACAAG
AAGCGCGTGTAGCCTTCGATGCGCTAATGCGTGATAAAGAACAAGAGGAAGCCTTGTTAGCCCAAGAAGAAGTTAAGCTA
GCAATTCAAGCAAGACTGAATACGCCGAACTAA

Upstream 100 bases:

>100_bases
ACTCTTCGACTTAGTATAGAACCTACCTGCTTTTTACGCGGCTAGGTCCTTGTGGCGTGCACTTAATCAAATCTGTATTT
AGTTATTGCGGACAATAAAA

Downstream 100 bases:

>100_bases
CAGGTATATTGTTAGCGCCGTTTGGCGTATTAGCTCTATGTCAGTAAAAGGATTTACTGACATATGACCTTAAGTTTTAG
ATACAAAAAAGCCGCTTAAT

Product: choline/carnitine/betaine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 650

Protein sequence:

>650_residues
MKKHFELIDKPTFFGALLLLCAVVIPLLLFPAEGAEWIAVAKTFMTDKLGFAYLGLGLAAFFFMIYIVFSDIGQIKLGDP
DEKPEFALASWAAMLFCGGIGASILYWGTIEWAYYYQNPPFQLEAGSEEAVRWAATYGLFHWGPIAWCIYMIPAIPIAYF
FYVRKQPVLKVSAALMPVIGEANSFGKLGKVIDILFIFGLLGGAATTLGLAAPLINEGISYLFGIPATTGSQILVLMVCT
AIFAYSSYMGMDKGIKILSNINFWGALGLLLFVLVCGPTIFMLETGLDSIGRMLSNFFVMATWAEPFGGMGTFEDTHFPQ
DWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGAVFFGSLGCSMYFIILGNYGLSLQLSGQLDVVSILNAEGATRAI
FAILETLPFSTLIIALFTLLCVIFTATTFDSISYILASVVQTNVTEDPMRWNRLFWAFTLSFMPSALMFMGGLATLQTAA
IVGGLPLLIIAVMLMISGVKAAMLDLSHQDNYVDPVINISDLPDVDPWSKEGQALARFEALRDKAINAADLEREANDAIW
MLKKQLRREALARGESSVELGDAPDEIIEQLRQLTDDSMKAKEAKLAASELAQEARVAFDALMRDKEQEEALLAQEEVKL
AIQARLNTPN

Sequences:

>Translated_650_residues
MKKHFELIDKPTFFGALLLLCAVVIPLLLFPAEGAEWIAVAKTFMTDKLGFAYLGLGLAAFFFMIYIVFSDIGQIKLGDP
DEKPEFALASWAAMLFCGGIGASILYWGTIEWAYYYQNPPFQLEAGSEEAVRWAATYGLFHWGPIAWCIYMIPAIPIAYF
FYVRKQPVLKVSAALMPVIGEANSFGKLGKVIDILFIFGLLGGAATTLGLAAPLINEGISYLFGIPATTGSQILVLMVCT
AIFAYSSYMGMDKGIKILSNINFWGALGLLLFVLVCGPTIFMLETGLDSIGRMLSNFFVMATWAEPFGGMGTFEDTHFPQ
DWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGAVFFGSLGCSMYFIILGNYGLSLQLSGQLDVVSILNAEGATRAI
FAILETLPFSTLIIALFTLLCVIFTATTFDSISYILASVVQTNVTEDPMRWNRLFWAFTLSFMPSALMFMGGLATLQTAA
IVGGLPLLIIAVMLMISGVKAAMLDLSHQDNYVDPVINISDLPDVDPWSKEGQALARFEALRDKAINAADLEREANDAIW
MLKKQLRREALARGESSVELGDAPDEIIEQLRQLTDDSMKAKEAKLAASELAQEARVAFDALMRDKEQEEALLAQEEVKL
AIQARLNTPN
>Mature_650_residues
MKKHFELIDKPTFFGALLLLCAVVIPLLLFPAEGAEWIAVAKTFMTDKLGFAYLGLGLAAFFFMIYIVFSDIGQIKLGDP
DEKPEFALASWAAMLFCGGIGASILYWGTIEWAYYYQNPPFQLEAGSEEAVRWAATYGLFHWGPIAWCIYMIPAIPIAYF
FYVRKQPVLKVSAALMPVIGEANSFGKLGKVIDILFIFGLLGGAATTLGLAAPLINEGISYLFGIPATTGSQILVLMVCT
AIFAYSSYMGMDKGIKILSNINFWGALGLLLFVLVCGPTIFMLETGLDSIGRMLSNFFVMATWAEPFGGMGTFEDTHFPQ
DWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGAVFFGSLGCSMYFIILGNYGLSLQLSGQLDVVSILNAEGATRAI
FAILETLPFSTLIIALFTLLCVIFTATTFDSISYILASVVQTNVTEDPMRWNRLFWAFTLSFMPSALMFMGGLATLQTAA
IVGGLPLLIIAVMLMISGVKAAMLDLSHQDNYVDPVINISDLPDVDPWSKEGQALARFEALRDKAINAADLEREANDAIW
MLKKQLRREALARGESSVELGDAPDEIIEQLRQLTDDSMKAKEAKLAASELAQEARVAFDALMRDKEQEEALLAQEEVKL
AIQARLNTPN

Specific function: Unknown

COG id: COG1292

COG function: function code M; Choline-glycine betaine transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BCCT transporter (TC 2.A.15) family [H]

Homologues:

Organism=Escherichia coli, GI1788102, Length=436, Percent_Identity=34.4036697247706, Blast_Score=288, Evalue=6e-79,
Organism=Escherichia coli, GI1786224, Length=462, Percent_Identity=33.5497835497836, Blast_Score=269, Evalue=4e-73,
Organism=Escherichia coli, GI1786506, Length=598, Percent_Identity=28.9297658862876, Blast_Score=237, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000060
- InterPro:   IPR018093 [H]

Pfam domain/function: PF02028 BCCT [H]

EC number: NA

Molecular weight: Translated: 71565; Mature: 71565

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS01303 BCCT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHFELIDKPTFFGALLLLCAVVIPLLLFPAEGAEWIAVAKTFMTDKLGFAYLGLGLAA
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFFMIYIVFSDIGQIKLGDPDEKPEFALASWAAMLFCGGIGASILYWGTIEWAYYYQNPP
HHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCC
FQLEAGSEEAVRWAATYGLFHWGPIAWCIYMIPAIPIAYFFYVRKQPVLKVSAALMPVIG
EEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
EANSFGKLGKVIDILFIFGLLGGAATTLGLAAPLINEGISYLFGIPATTGSQILVLMVCT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHH
AIFAYSSYMGMDKGIKILSNINFWGALGLLLFVLVCGPTIFMLETGLDSIGRMLSNFFVM
HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHEEE
ATWAEPFGGMGTFEDTHFPQDWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGAVFF
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCHHHH
GSLGCSMYFIILGNYGLSLQLSGQLDVVSILNAEGATRAIFAILETLPFSTLIIALFTLL
HHHHHHEEEEEEECCCEEEEECCCCCEEHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
CVIFTATTFDSISYILASVVQTNVTEDPMRWNRLFWAFTLSFMPSALMFMGGLATLQTAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IVGGLPLLIIAVMLMISGVKAAMLDLSHQDNYVDPVINISDLPDVDPWSKEGQALARFEA
HHCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LRDKAINAADLEREANDAIWMLKKQLRREALARGESSVELGDAPDEIIEQLRQLTDDSMK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHH
AKEAKLAASELAQEARVAFDALMRDKEQEEALLAQEEVKLAIQARLNTPN
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCC
>Mature Secondary Structure
MKKHFELIDKPTFFGALLLLCAVVIPLLLFPAEGAEWIAVAKTFMTDKLGFAYLGLGLAA
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFFMIYIVFSDIGQIKLGDPDEKPEFALASWAAMLFCGGIGASILYWGTIEWAYYYQNPP
HHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCC
FQLEAGSEEAVRWAATYGLFHWGPIAWCIYMIPAIPIAYFFYVRKQPVLKVSAALMPVIG
EEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
EANSFGKLGKVIDILFIFGLLGGAATTLGLAAPLINEGISYLFGIPATTGSQILVLMVCT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHH
AIFAYSSYMGMDKGIKILSNINFWGALGLLLFVLVCGPTIFMLETGLDSIGRMLSNFFVM
HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHEEE
ATWAEPFGGMGTFEDTHFPQDWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGAVFF
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCHHHH
GSLGCSMYFIILGNYGLSLQLSGQLDVVSILNAEGATRAIFAILETLPFSTLIIALFTLL
HHHHHHEEEEEEECCCEEEEECCCCCEEHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
CVIFTATTFDSISYILASVVQTNVTEDPMRWNRLFWAFTLSFMPSALMFMGGLATLQTAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IVGGLPLLIIAVMLMISGVKAAMLDLSHQDNYVDPVINISDLPDVDPWSKEGQALARFEA
HHCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LRDKAINAADLEREANDAIWMLKKQLRREALARGESSVELGDAPDEIIEQLRQLTDDSMK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHH
AKEAKLAASELAQEARVAFDALMRDKEQEEALLAQEEVKLAIQARLNTPN
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]