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The map label for this gene is 167622110

Identifier: 167622110

GI number: 167622110

Start: 195745

End: 196524

Strand: Direct

Name: 167622110

Synonym: Shal_0169

Alternate gene names: NA

Gene position: 195745-196524 (Clockwise)

Preceding gene: 167622109

Following gene: 167622111

Centisome position: 3.74

GC content: 45.9

Gene sequence:

>780_bases
ATGATGAGTTTTGAAGCCTTTACCTCGTTTGAAAAGCCGCTTGAACATAAGCAGGCACCAAGAATCAACCGCGTACATAT
CGGTTTAGTGCAGTTAAGCACAGACCACAGTCTAGAAATGGACTGGGCTAAGTTATTAGGTACACAAGCAGGCGTGTTTA
GCTCTCGCGTGTTCTACTCAAGCGAAATGACTCCTGAAGCACTCGATCAGATCGCTAGCGGAATCGTTGAAGCGTCTGAC
TTGATCGCAACAGGTCTACCAATGGATGTGATGGCATTTGGCTGCACATCAGCTTCAATCATTATCGGTGAAGAAAAAGT
CGCCTCACTATTGACTCAAAACCGTGGTGACATCCCTGCGACCAACCCATGGACAGCGGCTAAAGCGTCATTCAAGCACT
TAAATGCGAAGAAGATTGCCGTATTTTCTCCTTACCCAACTAGCGTTAACTACCCACTGTATCAACAACTAACGGATGCA
GATTTTGATGTAGTGACTCTAGGTTCATTAGGTATCGAACGCGATACCGACATCACTTTAGTGGCTAAAGAATCAATGTT
CGCCGCGCTTGAGTTGATGCTTAAAGATTCTGACGCAGAGTTGGTGTTTATGTCATGCACTAACCTACGCGTACTCGATT
ATATCGAAGAGATCGAAGCCAAATTCGGCATTCCAGTGGTATGCAGTAACTCTGCGATGTTCTGGCATGCAATGCACCTG
ACTGGCAACGTGGCGCAATGCCCTGGCTACGGCAAATTACTTAACGCTAAAACAGCTTAA

Upstream 100 bases:

>100_bases
AGCGCGCAGAACCAGAATTATTGATTATCAAATAACTTAATATAGCCATTGATTTCTCCGGAGGGAGCCGGAGAAATCAT
TACTAAAAGAGCATCTCATT

Downstream 100 bases:

>100_bases
GCTGTTGGCAAAAATATAATAATTATTGAGATAAAAATAATGTCTAATACACAGAAAGGTTGGTTGGCTGCTATTTTCGT
AGGTCTACTATGGGGTATCC

Product: Asp/Glu racemase

Products: NA

Alternate protein names: AMDase [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MMSFEAFTSFEKPLEHKQAPRINRVHIGLVQLSTDHSLEMDWAKLLGTQAGVFSSRVFYSSEMTPEALDQIASGIVEASD
LIATGLPMDVMAFGCTSASIIIGEEKVASLLTQNRGDIPATNPWTAAKASFKHLNAKKIAVFSPYPTSVNYPLYQQLTDA
DFDVVTLGSLGIERDTDITLVAKESMFAALELMLKDSDAELVFMSCTNLRVLDYIEEIEAKFGIPVVCSNSAMFWHAMHL
TGNVAQCPGYGKLLNAKTA

Sequences:

>Translated_259_residues
MMSFEAFTSFEKPLEHKQAPRINRVHIGLVQLSTDHSLEMDWAKLLGTQAGVFSSRVFYSSEMTPEALDQIASGIVEASD
LIATGLPMDVMAFGCTSASIIIGEEKVASLLTQNRGDIPATNPWTAAKASFKHLNAKKIAVFSPYPTSVNYPLYQQLTDA
DFDVVTLGSLGIERDTDITLVAKESMFAALELMLKDSDAELVFMSCTNLRVLDYIEEIEAKFGIPVVCSNSAMFWHAMHL
TGNVAQCPGYGKLLNAKTA
>Mature_259_residues
MMSFEAFTSFEKPLEHKQAPRINRVHIGLVQLSTDHSLEMDWAKLLGTQAGVFSSRVFYSSEMTPEALDQIASGIVEASD
LIATGLPMDVMAFGCTSASIIIGEEKVASLLTQNRGDIPATNPWTAAKASFKHLNAKKIAVFSPYPTSVNYPLYQQLTDA
DFDVVTLGSLGIERDTDITLVAKESMFAALELMLKDSDAELVFMSCTNLRVLDYIEEIEAKFGIPVVCSNSAMFWHAMHL
TGNVAQCPGYGKLLNAKTA

Specific function: Unknown

COG id: COG3473

COG function: function code Q; Maleate cis-trans isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =4.1.1.76 [H]

Molecular weight: Translated: 28297; Mature: 28297

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSFEAFTSFEKPLEHKQAPRINRVHIGLVQLSTDHSLEMDWAKLLGTQAGVFSSRVFYS
CCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHCCCCCHHHHEEEEC
SEMTPEALDQIASGIVEASDLIATGLPMDVMAFGCTSASIIIGEEKVASLLTQNRGDIPA
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECHHHHHHHHHCCCCCCCC
TNPWTAAKASFKHLNAKKIAVFSPYPTSVNYPLYQQLTDADFDVVTLGSLGIERDTDITL
CCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCEEE
VAKESMFAALELMLKDSDAELVFMSCTNLRVLDYIEEIEAKFGIPVVCSNSAMFWHAMHL
EEHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEECCCEEEEEEEEC
TGNVAQCPGYGKLLNAKTA
CCCHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MMSFEAFTSFEKPLEHKQAPRINRVHIGLVQLSTDHSLEMDWAKLLGTQAGVFSSRVFYS
CCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHCCCCCHHHHEEEEC
SEMTPEALDQIASGIVEASDLIATGLPMDVMAFGCTSASIIIGEEKVASLLTQNRGDIPA
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECHHHHHHHHHCCCCCCCC
TNPWTAAKASFKHLNAKKIAVFSPYPTSVNYPLYQQLTDADFDVVTLGSLGIERDTDITL
CCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCEEE
VAKESMFAALELMLKDSDAELVFMSCTNLRVLDYIEEIEAKFGIPVVCSNSAMFWHAMHL
EEHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEECCCEEEEEEEEC
TGNVAQCPGYGKLLNAKTA
CCCHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1369144 [H]