Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622090

Identifier: 167622090

GI number: 167622090

Start: 167271

End: 168083

Strand: Reverse

Name: 167622090

Synonym: Shal_0149

Alternate gene names: NA

Gene position: 168083-167271 (Counterclockwise)

Preceding gene: 167622093

Following gene: 167622089

Centisome position: 3.22

GC content: 44.03

Gene sequence:

>813_bases
ATGCTAAACCTTAAACGCGTTATTGGTCTTGCGGTTACCGCAGCACTAGTTGTTGGTATGCCAGCCCAAGCTAACGAAGT
TATCAAACTTGCGACAACAACCAGTACTGAAAACTCAGGCCTATTAAAGAACCTACTGCCAACCTTTGAAAAAGAAACTG
GCTACAAGGTACAAGTTATCGCGACGGGTACTGGTAAGGCGCTTAAACTTGCTCGCCAAGGCGACGTTGACGTTGTAATG
ACTCATGCACCAGGCGCTGAAGCGAAATTTGTTGAAGAAGGTTATGGTCATCTACCACGCGGTATCATGGAAAATGATTT
TGTTGTTCTAGGCCCAAAGAACGACCCAGCTCAAATCCGTTCAAGCAAAACAGCCGAAGAAGCTTTTGCTAAAATCGAAA
AATCAGGCGTACCTTTCATTTCACGTGGTGACAACTCAGGCACCAACATGAAAGAACTACTGATCTGGAAGAATGCTAAT
ATTACTCCAGACTTCAAAGGTTACACGGCTGTTGGTCAAGGTATGGGCAAAACCCTACTTATGGCTAGCGAATTAGAAGC
TTATACACTATCTGACCGTGGCACTTTTGTTGCTTATTCAGGTAAAATAGACTTAGCAGTAGATTTTGATGGCGGTGCAG
CACTGGCTAACCCATATCAAATCATACTAATCAGTGAAACCAAGTACCCAACACTAAACCACAAGGGTGCTAAGGCATTG
AGCGACTGGCTGATCGGCGCTGAAGCGCAAGGCATGATCAACAATTATAAAGTTCAGGGAGAACAATTGTTCAAGGCAAC
TTATAGCGAATGA

Upstream 100 bases:

>100_bases
TCAAGCATGGCATCAAACTTGCTTTTCATGAGCACTGAATTCGATTTTTAACAGGCGCTCAGGTATCGAGTGGCCAATTT
TAATTTTCCAAGGAGTAAAA

Downstream 100 bases:

>100_bases
ATGAAGGCTGGTTAGCCCTTATACAGCAGGCATTAAGCCTGCTGTTTTCATTGGACCCAGAAGTGTGGTCCATCATATCT
GTCTCTTTTTCAGTATCATT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; TUNGstate Abc Transporter Permease; Signal Peptide; ABC-Type Transport Protein Permease Component; ABC Transporter; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Periplasmic Protein

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MLNLKRVIGLAVTAALVVGMPAQANEVIKLATTTSTENSGLLKNLLPTFEKETGYKVQVIATGTGKALKLARQGDVDVVM
THAPGAEAKFVEEGYGHLPRGIMENDFVVLGPKNDPAQIRSSKTAEEAFAKIEKSGVPFISRGDNSGTNMKELLIWKNAN
ITPDFKGYTAVGQGMGKTLLMASELEAYTLSDRGTFVAYSGKIDLAVDFDGGAALANPYQIILISETKYPTLNHKGAKAL
SDWLIGAEAQGMINNYKVQGEQLFKATYSE

Sequences:

>Translated_270_residues
MLNLKRVIGLAVTAALVVGMPAQANEVIKLATTTSTENSGLLKNLLPTFEKETGYKVQVIATGTGKALKLARQGDVDVVM
THAPGAEAKFVEEGYGHLPRGIMENDFVVLGPKNDPAQIRSSKTAEEAFAKIEKSGVPFISRGDNSGTNMKELLIWKNAN
ITPDFKGYTAVGQGMGKTLLMASELEAYTLSDRGTFVAYSGKIDLAVDFDGGAALANPYQIILISETKYPTLNHKGAKAL
SDWLIGAEAQGMINNYKVQGEQLFKATYSE
>Mature_270_residues
MLNLKRVIGLAVTAALVVGMPAQANEVIKLATTTSTENSGLLKNLLPTFEKETGYKVQVIATGTGKALKLARQGDVDVVM
THAPGAEAKFVEEGYGHLPRGIMENDFVVLGPKNDPAQIRSSKTAEEAFAKIEKSGVPFISRGDNSGTNMKELLIWKNAN
ITPDFKGYTAVGQGMGKTLLMASELEAYTLSDRGTFVAYSGKIDLAVDFDGGAALANPYQIILISETKYPTLNHKGAKAL
SDWLIGAEAQGMINNYKVQGEQLFKATYSE

Specific function: Unknown

COG id: COG2998

COG function: function code H; ABC-type tungstate transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28965; Mature: 28965

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLKRVIGLAVTAALVVGMPAQANEVIKLATTTSTENSGLLKNLLPTFEKETGYKVQVI
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEE
ATGTGKALKLARQGDVDVVMTHAPGAEAKFVEEGYGHLPRGIMENDFVVLGPKNDPAQIR
EECCCCEEEEEECCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHH
SSKTAEEAFAKIEKSGVPFISRGDNSGTNMKELLIWKNANITPDFKGYTAVGQGMGKTLL
CCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCEEE
MASELEAYTLSDRGTFVAYSGKIDLAVDFDGGAALANPYQIILISETKYPTLNHKGAKAL
EEECCCEEEECCCCEEEEECCEEEEEEECCCCCEECCCEEEEEEECCCCCCCCCCCHHHH
SDWLIGAEAQGMINNYKVQGEQLFKATYSE
HHHHCCCCCCCCCCCEEECHHHHHHHHCCC
>Mature Secondary Structure
MLNLKRVIGLAVTAALVVGMPAQANEVIKLATTTSTENSGLLKNLLPTFEKETGYKVQVI
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEE
ATGTGKALKLARQGDVDVVMTHAPGAEAKFVEEGYGHLPRGIMENDFVVLGPKNDPAQIR
EECCCCEEEEEECCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHH
SSKTAEEAFAKIEKSGVPFISRGDNSGTNMKELLIWKNANITPDFKGYTAVGQGMGKTLL
CCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCEEE
MASELEAYTLSDRGTFVAYSGKIDLAVDFDGGAALANPYQIILISETKYPTLNHKGAKAL
EEECCCEEEECCCCEEEEECCEEEEEEECCCCCEECCCEEEEEEECCCCCCCCCCCHHHH
SDWLIGAEAQGMINNYKVQGEQLFKATYSE
HHHHCCCCCCCCCCCEEECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA